BAC Information

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BAC

Clone NameB6Ng01-311M05
Chromosome7 (Build37)
Map Location 101,847,330 - 101,980,086
singlet/doubletdoublet
Overlap geneEG666816
Upstream geneEG638305, EG545982
Downstream geneLOC100040132, LOC666823
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311M05.bB6Ng01-311M05.g
ACCGA103401GA103402
length402575
definitionB6Ng01-311M05.b B6Ng01-311M05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,979,679 - 101,980,086)(101,847,330 - 101,847,904)
sequence
atttcaagtaatctgcaccttaacttatgtgagactaatagagtgcctac
aagactgttttaatggttttggttggaatagttttgcctgttcagtaaac
acagcaaaaactttccaggagttttacaaccaggaatggcgctgagttta
aagtttgtttgtgtgtgtgtgtattccctctcccattttgttttccacaa
tgttcagtgccaaaatatatacttttattatctttgattaatcaacagtc
actgtaatacattatacagatgtctttatgaaaacattttagacatttca
tctttcagatggtactgattaaagtgagctacaaggtagtaagggtagta
ttatatgaataaatgaatgtaggtcatggtggtagtgatgagagtagtgg
gt

gaattcattatgtgcgattggtaagtcttcacaaatcctaataaatcctc
aaacttttgtttcacaatcatcatcactcatggtgatgaatgtgtaggat
gaagtttacagatacactgcatttaatttttttatgaaaaactgctaaac
tcaggcagattcttttcttgtgatctgttataggtagcatatttataata
gtatctatctaatttttgttcatcttcattaatgatttttccttacattc
tgattttccattctgttgcattcaataaaaccatctctcttccttgaagg
ctgcactacaataagttccttccttgctctttcttcgtatctctaattct
gtatagtcatgaaaagtaccatgatggtgaagatgatattgaagaatata
gaataagaataagcataaacataagaagcagaggaggaggaggaggaagc
acaagcagaaggaagaagaagatagaagaaaatagaagaaaaaagaggaa
gaggaggatgctgaggaaggggaggaggaggaggaagaagaagaaaaaga
aggaggaggaggaagatgaggatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_101979679_101980086
seq2: B6Ng01-311M05.b_45_452 (reverse)

seq1  ACCCACTACTCTCATCACTACCACCATGACCTACATTCATTTATTCATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTACTCTCATCACTACCACCATGACCTACATTCATTTATTCATAT  50

seq1  AATACTACCCTTACTACCTTGTAGCTCACTTTAATCAGTACCATCTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTACCCTTACTACCTTGTAGCTCACTTTAATCAGTACCATCTGAAA  100

seq1  GATGAAATGTCTAAAATGTTTTCATAAAGACATCTGTATAATGTATTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAATGTCTAAAATGTTTTCATAAAGACATCTGTATAATGTATTACA  150

seq1  GTGACTGTTGATTAATCAAAGATAATAAAAGTATATATTTTGGCACTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGTTGATTAATCAAAGATAATAAAAGTATATATTTTGGCACTGAA  200

seq1  CATTGTGGAAAACAAAATGGGAGAGGGAATACACACACACACAAACAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTGGAAAACAAAATGGGAGAGGGAATACACACACACACAAACAAAC  250

seq1  TTTAAACTCAGCGCCATTCCTGGTTGTAAAACTCCTGGAAAGTTTTTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTCAGCGCCATTCCTGGTTGTAAAACTCCTGGAAAGTTTTTGCT  300

seq1  GTGTTTACTGAACAGGCAAAACTATTCCAACCAAAACCATTAAAACAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTACTGAACAGGCAAAACTATTCCAACCAAAACCATTAAAACAGTC  350

seq1  TTGTAGGCACTCTATTAGTCTCACATAAGTTAAGGTGCAGATTACTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGGCACTCTATTAGTCTCACATAAGTTAAGGTGCAGATTACTTGAA  400

seq1  ATGAATTC  408
      ||||||||
seq2  ATGAATTC  408


seq1: chr7_101847330_101847904
seq2: B6Ng01-311M05.g_67_641

seq1  GAATTCATTATGTGCGATTGGTAAGTCTTCACAAATCCTAATAAATCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTATGTGCGATTGGTAAGTCTTCACAAATCCTAATAAATCCTC  50

seq1  AAACTTTTGTTTCACAATCATCATCACTCATGGTGATGAATGTGTAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTTGTTTCACAATCATCATCACTCATGGTGATGAATGTGTAGGAT  100

seq1  GAAGTTTACAGATACACTGCATTTAATTTTTTTATGAAAAACTGCTAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTACAGATACACTGCATTTAATTTTTTTATGAAAAACTGCTAAAC  150

seq1  TCAGGCAGATTCTTTTCTTGTGATCTGTTATAGGTAGCATATTTATAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCAGATTCTTTTCTTGTGATCTGTTATAGGTAGCATATTTATAATA  200

seq1  GTATCTATCTAATTTTTGTTCATCTTCATTAATGATTTTTCCTTACATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTATCTAATTTTTGTTCATCTTCATTAATGATTTTTCCTTACATTC  250

seq1  TGATTTTCCATTCTGTTGCATTCAATAAAACCATCTCTCTTCCTTGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTCCATTCTGTTGCATTCAATAAAACCATCTCTCTTCCTTGAAGG  300

seq1  CTGCACTACAATAAGTTCCTTCCTTGCTCTTTCTTCGTATCTCTAATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTACAATAAGTTCCTTCCTTGCTCTTTCTTCGTATCTCTAATTCT  350

seq1  GTATAGTCATGAAAAGTACCATGATGGTGAAGATGATATTGAAGAATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGTCATGAAAAGTACCATGATGGTGAAGATGATATTGAAGAATATA  400

seq1  GAATAAGAATAAGCATAAACATAAGAAGCAGAGGAGGAGGAGGAGGAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAGAATAAGCATAAACATAAGAAGCAGAGGAGGAGGAGGAGGAAGC  450

seq1  ACAAGCAGAAGGAAGAAGAAGATAGAAGAAAATAGAAGAAAAAAGAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCAGAAGGAAGAAGAAGATAGAAGAAAATAGAAGAAAAAAGAGGAA  500

seq1  GAGGAGGATGCTGAGGAAGGGGAGGAGGAGGAGGAAGAAGAAGAAAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGATGCTGAGGAAGGGGAGGAGGAGGAGGAAGAAGAAGAAAAAGA  550

seq1  AGGAGGAGGAGGAAGATGAGGATGA  575
      |||||||||||||||||||||||||
seq2  AGGAGGAGGAGGAAGATGAGGATGA  575


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