BAC Information

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BAC

Clone NameB6Ng01-311P02
Chromosome7 (Build37)
Map Location 150,015,910 - 150,193,272
singlet/doubletdoublet
Overlap geneEG624121, Th, Ascl2, Tspan32
Upstream geneMuc5b, Tollip, EG623757, Brsk2, 2700078K21Rik, Dusp8, LOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as, Ins2, EG640264
Downstream geneR74862, Cd81, Tssc4, Trpm5, Kcnq1, Cdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311P02.bB6Ng01-311P02.g
ACCGA103535GA103536
length711660
definitionB6Ng01-311P02.b B6Ng01-311P02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,015,910 - 150,016,619)(150,192,618 - 150,193,272)
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcgaatgctttttccgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcatatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagggaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagttccctctacttctattttgtggaatagtttgtgcagaactgg
gattagatcttctttgaaggtctggtagaactctgcactaaacccatctc
gtcctgggctttttttggcctcttttatttattaccagctgttgccagta
actgtgggatggaacctacctggctgttgccaggtaaatgtgggggtaga
gtttagacagaatgctaacagtcacccatggctccagctggatatgtagc
agaagactgccttatctgtcatcactggaaagggagccccttggttttgt
ggagtctcaatgacccagaataggggaatgctagggtgctgaggtaggag
tggggtgggtg
gaattcacccagtcctgtctccagacctggctaggtatcagaaccaagcc
cttctggggtttttagagataaccccagggcagagagggccaattctctc
tttcaggggccctgcagcacccaggtagaggttttttttttttttttttt
tttgactggtccaggtaggagggtcctgattgagcaagtggaaggtcctg
actgtgtaagtggagggactcactggtctatatcccctgacctttgcttc
tttctggatacttctgctggggtcaggcagctccctggtcttattcctct
ccagctcttgtccccgtctgaggtctgggagccggggtcgtctggcagca
catggaacttaccgcagccatgaggccatgggcctccctcacagtggcta
tggtgctcaaagcagctcccaggctcaggagccccgctaggctgatcccc
acatagaaggctgtgggaagagaaagacagagggtatggaatctagcctg
gggactgggcataaaggttggatctgaaatctatctacttttgggagtca
catagctagaaactgacctttcggggaggtcccaaaaaggcacatatctc
tggctcaaaagaaggaatgtccatagcccaatagcctgtcctcctgaagg
ctgaaaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_150015910_150016619
seq2: B6Ng01-311P02.b_46_756

seq1  GAATTCCTGATCTTTCCAAGACTTTTATCATGAATGGGTGTTGGATCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATCTTTCCAAGACTTTTATCATGAATGGGTGTTGGATCTTG  50

seq1  TCGAATGCTTTTTCCGCATCTAACGAGATGATCATGTGGTTTTTGTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAATGCTTTTTCCGCATCTAACGAGATGATCATGTGGTTTTTGTCTTT  100

seq1  GAGTTTGTTTATATAATGGATTACATTGATGGATTTTCATATATTAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGTTTATATAATGGATTACATTGATGGATTTTCATATATTAAACC  150

seq1  ATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGATGATTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGATGATTGCT  200

seq1  TTAATGTGTTCTTGGATTCGGTTAGCGAGAATTTTATTAAGGATTTTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTGTTCTTGGATTCGGTTAGCGAGAATTTTATTAAGGATTTTTGC  250

seq1  ATCGATATTCATAAGGGAAATTGGTCTGAAGTTCTCTATCTTTGTTGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGATATTCATAAGGGAAATTGGTCTGAAGTTCTCTATCTTTGTTGGAT  300

seq1  CTTTCTGTGGTTTAGGTATCAGAGTAATTGTGGCTTCATAGAATGAGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTGGTTTAGGTATCAGAGTAATTGTGGCTTCATAGAATGAGTTG  350

seq1  GGTAGAGTTCCCTCTACTTCTATTTTGTGGAATAGTTTGTGCAGAACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGTTCCCTCTACTTCTATTTTGTGGAATAGTTTGTGCAGAACTGG  400

seq1  GATTAGATCTTCTTTGAAGGTCTGGTAGAACTCTGCACTAAACCCATCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGATCTTCTTTGAAGGTCTGGTAGAACTCTGCACTAAACCCATCTC  450

seq1  GTCCTGGGCTTTTTTTGGCCTCTTTTATTTATTACCAGCTGTTGCCAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGGCTTTTTTTGGCCTCTTTTATTTATTACCAGCTGTTGCCAGTA  500

seq1  ACTGTGGGATGGAACCTACCTGGCTGTTGCCAGGTAAATGTGGGGGTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGGATGGAACCTACCTGGCTGTTGCCAGGTAAATGTGGGGGTAGA  550

seq1  GTTTAGACAGAATGCTAACAGTCACCCATGGCTCCAGCTGGATATGTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGACAGAATGCTAACAGTCACCCATGGCTCCAGCTGGATATGTAGC  600

seq1  AGAAGACTGCCTTATCTGTCATCACTGGAAAGGGAGCCCCTTGGTTTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACTGCCTTATCTGTCATCACTGGAAAGGGAGCCCCTTGGTTTTGT  650

seq1  GGAGTCTCAATGACCCAGAATAGGGGAATGCTAGGGTGCTGAGGTAGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTCAATGACCCAGAATAGGGGAATGCTAGGGTGCTGAGGTAGGAG  700

seq1  T-GGGTGGGTG  710
      | |||||||||
seq2  TGGGGTGGGTG  711

seq1: chr7_150192618_150193272
seq2: B6Ng01-311P02.g_73_732 (reverse)

seq1  TCCTTCTCAGCC-TCAGGAGGACAGGCTATTGGGCTATGGACATTCCTTC  49
      ||||| |||||| |||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTCAGCCTTCAGGAGGACAGGCTATTGGGCTATGGACATTCCTTC  50

seq1  TTTTGAGCCAGAGATATGTGCC-TTTTGGGACCTCCCCG-AAGGTCAG-T  96
      |||||||||||||||||||||| |||||||||||||||| |||||||| |
seq2  TTTTGAGCCAGAGATATGTGCCTTTTTGGGACCTCCCCGAAAGGTCAGTT  100

seq1  TCTAGCTCTGTGACTCCC-AAAGTAGATAGATTTCAGATCCAACCTCTAT  145
      ||||||| |||||||||| ||||||||||||||||||||||||||| |||
seq2  TCTAGCTATGTGACTCCCAAAAGTAGATAGATTTCAGATCCAACCTTTAT  150

seq1  GCCCAGTCCCCAGGCTAGATTCCATACCCTCTGTCTTTCTCTTCCCACAG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGTCCCCAGGCTAGATTCCATACCCTCTGTCTTTCTCTTCCCACAG  200

seq1  CCTTCTATGTGGGGATCAGCCTAGCGGGGCTCCTGAGCCTGGGAGCTGCT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTATGTGGGGATCAGCCTAGCGGGGCTCCTGAGCCTGGGAGCTGCT  250

seq1  CTGAGCACCATAGCCACTGTGAGGGAGGCCCATGGCCTCATGGCTGCGGT  295
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCACCATAGCCACTGTGAGGGAGGCCCATGGCCTCATGGCTGCGGT  300

seq1  AAGTTCCATGTGCTGCCAGACGACCCCGGCTCCCAGACCTCAGACGGGGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCATGTGCTGCCAGACGACCCCGGCTCCCAGACCTCAGACGGGGA  350

seq1  CAAGAGCTGGAGAGGAATAAGACCAGGGAGCTGCCTGACCCCAGCAGAAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGCTGGAGAGGAATAAGACCAGGGAGCTGCCTGACCCCAGCAGAAG  400

seq1  TATCCAGAAAGAAGCAAAGGTCAGGGGATATAGACCAGTGAGTCCCTCCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGAAAGAAGCAAAGGTCAGGGGATATAGACCAGTGAGTCCCTCCA  450

seq1  CTTACACAGTCAGGACCTTCCACTTGCTCAATCAGGACCCTCCTACCTGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACACAGTCAGGACCTTCCACTTGCTCAATCAGGACCCTCCTACCTGG  500

seq1  ACCAGTCAAAAAAAAAAAAAAAAAAAAAACCTCTACCTGGGTGCTGCAGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTCAAAAAAAAAAAAAAAAAAAAAACCTCTACCTGGGTGCTGCAGG  550

seq1  GCCCCTGAAAGAGAGAATTGGCCCTCTCTGCCCTGGGGTTATCTCTAAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGAAAGAGAGAATTGGCCCTCTCTGCCCTGGGGTTATCTCTAAAA  600

seq1  ACCCCAGAAGGGCTTGGTTCTGATACCTAGCCAGGTCTGGAGACAGGACT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGAAGGGCTTGGTTCTGATACCTAGCCAGGTCTGGAGACAGGACT  650

seq1  GGGTGAATTC  655
      ||||||||||
seq2  GGGTGAATTC  660