BAC Information

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BAC

Clone NameB6Ng01-312L12
Chromosome7 (Build37)
Map Location 5,675,296 - 5,676,444
singlet/doubletsinglet
Overlap genenone
Upstream geneBC022651, Suv420h2, Cox6b2, 4930401F20Rik, Il11, 4930572D21Rik, 2210411K11Rik, Rpl28, Ube2s, D430041B17Rik, Isoc2b, Isoc2a, LOC384524, Zfp628, Nat14, A430110N23Rik, LOC665049, Gm1079, Gm1078, Zfp579, Fiz1, Zfp524, 6430526N21Rik, 4632433K11Rik, Zfp784, Zfp580, Ccdc106, U2af2, Epn1, Rfpl4, Rasl2-9, EG665126, V1rd5, V1rd3, EG665150, Nlrp2, EG272350, V1rd4, EG665163, V1rd10, EG630071, EG665255, EG636697, EG636705, LOC636731, LOC673215, V1rd2, LOC100041627
Downstream geneLOC100041637, V1rd1, LOC100041647, V1rd11, LOC100041666, V1rd6, EG384525, EG269859, Nlrp4c, Zfp787, Zfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312L12.bB6Ng01-312L12.g
ACCGA104119GA104120
length1,1511,141
definitionB6Ng01-312L12.b B6Ng01-312L12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaactgaggaatatcaaatggctgagaagcacctgaaaaaatg
tttagcatccttaatcatcagggaaatgcaaatcaaaacaaccttgagat
tctacctcacaccagtcagaatggctaagttctaaaattcaagtgacagt
agatgctggcaaggatgtggagaaagaggaacactcctctatttttttca
tgctgattctagtttattcctaattgggattctctatggctagattttaa
ataatgttaaattcttaacatttagttgtcagttaatcccaagttgtaat
atacataatgtaagcttcctaaaatgatactttagtgaaaacaactattt
aacaagcacatgttctactacgtgcctttttttaaaaaataataattcca
tttgcttaatctcaaatgatatccccctcctggtacccctccaaactcct
gctatcccacatccatcctctcccccttccgatgaggctctatgggggca
ctcccatcctaccactcctgcttccctctatgctggggcatcaaactccc
atagaatctagagccttccctcccattaatgtcagacaaggctctcctct
gttatatatgtatctggagccctggaggtctgcctgtacatatgttggtt
gataccacatgcctttaatccacatattaagggggccatgacagccagat
ctctgagttagaagccagcattgactacaggcttagttccaggcttgtga
tggttacaaagcaaaacctcttttcaaaaaaattactatgaattggacag
tggtggcacgtgcctttaatcccagcagttgggaggcagaggctggtaga
tttctgagctcaaggacaccctgttatacagagtgagttccaggacagtc
atggctacacagagaaaccctgtctctaaaaacaaacaaacacacaaaca
aacaaattactgtgaaacaatttcttggaatgtttaatatttaatatgat
gtgatgaattaatatgatccaaacatatcaatgatgttgtatttgtttaa
gaaaaatgctatggactctcaaactctgacctgaacaaatatgaatagaa
tatttctgagaattatttctgacatagtataacaataatagccattattg
t
gaattcctcatctttccaagacttttatcatgaagtggtattggattttc
tcaaatgctttctcagcactaatgagatgatcatttgatttttgtctttg
agtttgattatatagtggattacattgatggatttctgtatattaaatca
tccctgcatttctgggattaagcctacttgatcattttggatgatggttt
ggatgtgttcttggattcagttcgtggggattttattgagtatttttgca
tcgatgttcataagggaaattggtctgaaattgtctttctttgttgggtt
ttattgtggtttatgtatcagagtaattgtggctcatagaatgaattggg
tagagtactttctgtttctgttttttttttttttccgaatagtttgagga
gaattggaattaggtcttttttgaaggtctgataaaactctgccctaaac
ccatctggtccggggatttatttggttgggaaactattaatgactgcttc
tatttctttagggaaaatggaactgtttagatcattaatctgttcctcat
gtaactttagtacctggtatctgtctaggaaatttgtccatttcacccag
gttttccagttttgttgagtatagccttttgtagtaggatctgttgatgt
tttggatttcctcaggttctgttgttatgtttcccttttcatatctgatt
ttgttaattagtatactgtccttgtgccctctagtgagtctggctaaggg
tttatctatcttgttgattttctcaaagaactacctcctggattgtttga
ttctttgaatagtcctcatttccacttggttgatttcagccctaagattt
tatgattttcctgcagtctactccttcttgggtgaattttgcttcctttt
ttttctagatcttttagggtgttgattgtcaggctgcctagtgtattttt
cttctcaacttttcttccttggaaggcactcagaagctatgagttttctt
cttaaggactgtttcattgtgtcatgtaagttttggtatgttgtgggttt
aattttcattaacctctagaaatttcaattctttcttctatctattcatg
actaatttactattgggttagtacgtgttgtccgtcacttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_5675296_5676444
seq2: B6Ng01-312L12.b_49_1199

seq1  GAATTCTCAACTGAGGAATATCAAATGGCTGAGAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAACTGAGGAATATCAAATGGCTGAGAAGCACCTGAAAAAATG  50

seq1  TTTAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCTTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCTTGAGAT  100

seq1  TCTACCTCACACCAGTCAGAATGGCTAAGTTCTAAAATTCAAGTGACAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTCACACCAGTCAGAATGGCTAAGTTCTAAAATTCAAGTGACAGT  150

seq1  AGATGCTGGCAAGGATGTGGAGAAAGAGGAACACTCCTCTATTTTTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGGCAAGGATGTGGAGAAAGAGGAACACTCCTCTATTTTTTTCA  200

seq1  TGCTGATTCTAGTTTATTCCTAATTGGGATTCTCTATGGCTAGATTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGATTCTAGTTTATTCCTAATTGGGATTCTCTATGGCTAGATTTTAA  250

seq1  ATAATGTTAAATTCTTAACATTTAGTTGTCAGTTAATCCCAAGTTGTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTTAAATTCTTAACATTTAGTTGTCAGTTAATCCCAAGTTGTAAT  300

seq1  ATACATAATGTAAGCTTCCTAAAATGATACTTTAGTGAAAACAACTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAATGTAAGCTTCCTAAAATGATACTTTAGTGAAAACAACTATTT  350

seq1  AACAAGCACATGTTCTACTACGTGCCTTTTTTTAAAAAATAATAATTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCACATGTTCTACTACGTGCCTTTTTTTAAAAAATAATAATTCCA  400

seq1  TTTGCTTAATCTCAAATGATATCCCCCTCCTGGTACCCCTCCAAACTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTAATCTCAAATGATATCCCCCTCCTGGTACCCCTCCAAACTCCT  450

seq1  GCTATCCCACATCCATCCTCTCCCCCTTCCGATGAGGCTCTATGGGGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCCACATCCATCCTCTCCCCCTTCCGATGAGGCTCTATGGGGGCA  500

seq1  CTCCCATCCTACCACTCCTGCTTCCCTCTATGCTGGGGCATCAAACTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATCCTACCACTCCTGCTTCCCTCTATGCTGGGGCATCAAACTCCC  550

seq1  ATAGAATCTAGAGCCTTCCCTCCCATTAATGTCAGACAAGGCTCTCCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATCTAGAGCCTTCCCTCCCATTAATGTCAGACAAGGCTCTCCTCT  600

seq1  GTTATATATGTATCTGGAGCCCTGGAGGTCTGCCTGTACATATGTTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATATGTATCTGGAGCCCTGGAGGTCTGCCTGTACATATGTTGGTT  650

seq1  GATACCACATGCCTTTAATCCACATATTAAGGGGGCCATGACAGCCAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCACATGCCTTTAATCCACATATTAAGGGGGCCATGACAGCCAGAT  700

seq1  CTCTGAGTTAGAAGCCAGCATTGACTACAGGCTTAGTTCCAGGCTTGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGTTAGAAGCCAGCATTGACTACAGGCTTAGTTCCAGGCTTGTGA  750

seq1  TGGTTACAAAGCAAAACCTCTTTTCAAAAAAATTACTATGAATTGGACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTACAAAGCAAAACCTCTTTTCAAAAAAATTACTATGAATTGGACAG  800

seq1  TGGTGGCACGTGCCTTTAATCCCAGCAGTTGGGAGGCAGAGGCTGGTAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCACGTGCCTTTAATCCCAGCAGTTGGGAGGCAGAGGCTGGTAGA  850

seq1  TTTCTGAGCTCAAGGACACCCTGTTATACAGAGTGAGTTCCAGGACAGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAGCTCAAGGACACCCTGTTATACAGAGTGAGTTCCAGGACAGTC  900

seq1  ATGGCTACACAGAGAAACCCTGTCTCTAAAAACAAACAAACACACAAACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTACACAGAGAAACCCTGTCTCTAAAAACAAACAAACACACAAACA  950

seq1  AACAAATTACTGTGAAACAA-TTCTTGGAATGTTTAATATTTAATAATGA  999
      |||||||||||||||||||| |||||||||||||||||||||||| ||||
seq2  AACAAATTACTGTGAAACAATTTCTTGGAATGTTTAATATTTAAT-ATGA  999

seq1  TGTGATGAATTAATATGATCCCAAACATATCAAATGATGTTGTA-TTGTT  1048
      ||||||||||||||||||| ||||||||||| |||||||||||| |||||
seq2  TGTGATGAATTAATATGAT-CCAAACATATC-AATGATGTTGTATTTGTT  1047

seq1  TAAGAAAAATTGCTATGGACTCTCAAACTCTGAACTG-ACAAATATGAAT  1097
      ||||||||| ||||||||||||||||||||||| ||| ||||||||||||
seq2  TAAGAAAAA-TGCTATGGACTCTCAAACTCTGACCTGAACAAATATGAAT  1096

seq1  AG-ATA-TTCTGAGA--TA-TTCTGACCATAAGTATAACAATAATAAGCA  1142
      || ||| ||||||||  || |||||| ||| |||||||||||||||  ||
seq2  AGAATATTTCTGAGAATTATTTCTGA-CAT-AGTATAACAATAATAGCCA  1144

seq1  TTATTGT  1149
      |||||||
seq2  TTATTGT  1151