BAC Information

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BAC

Clone NameB6Ng01-312M18
Chromosome7 (Build37)
Map Location 68,735,670 - 68,736,827
singlet/doubletsinglet
Overlap geneB230209E15Rik
Upstream geneLOC100041201, LOC100041211, LOC664896, LOC100041229, LOC625287, D0Kist2, LOC100041248, LOC100041259, EG664943, EG620934
Downstream geneLOC100041293, Ndn, Magel2, Mkrn3, Peg12, Atp5l-ps1, EG665038
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312M18.bB6Ng01-312M18.g
ACCGA104177GA104178
length1,1851,124
definitionB6Ng01-312M18.b B6Ng01-312M18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttaagctctgcaccccatttataatggggttatttgattt
ttttggagttcaccttcttgacttctttatatatattggatattagttcc
ctatctgatttaggataggtaaaggtcctttcccaaaatgttggtggcct
ttttgtcttattgatggtgtcttttgcctaacagaagctttgcaatttta
tgaggtcccatttgttgattcttgatcttacagcacaagccattgctttt
ctattcaggaattattcccctgtgcccatgtcttccaggcttttccccac
cttctcctctataagtttcactgtctctggttttatgtggaattccttga
tccacttagatttgaccttagtataaggagataggaatggatcaattcga
gttcttctatatgataaccaccagttgtcccagcaccatttgttgaaaat
gctgtcttttttccacaggatggttttagctcccttgccaaagatcacat
gaccataggtgtgtgggttcattgctgtgtcttcaattatattccattcg
tctacttgtctgtcattataccagtatcatggagtttttatcacaattgc
tctgtagtacagctttaggtcaggcatggtgattccaccaaaggttcttt
tatccttgagaacagtttttgctatcctaggttttttgttattccagatt
aatttgcagatcaccctttctaattcgttgaagaactgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttactatattgatcctgccaatccacgagtatgggagatctttccatctt
tggagatcttttttaatttctttcttcagagacttgaagttcttatcata
cagatctttcacttctttagttagagtaatgtcaaggtatttttatatta
tttgtgactattggagaagggtgttgttccctaattctttctcagcctgt
taagcctttgtgtagagaaaggccataggcttatttggagtattttatat
cagctactcacctgaagctgtttatcagctttgagtcctctggtggattt
agtgtcactatatattactatcatatccatctggcaaagggaattgtgaa
ctctctatccaagtgaattctcctgtaaaatactc
gaattcaaaagaaaaaaacttttactaaatttttaaattcatgctcactg
atggtgctgttatagtttaaccacacataaattcaaatgtcctggttaat
tgattccccatgatatataactcactcaacatcacagtgttaaaactcac
aaaaaagtagcagttaggtttcacctcattggtcgattgttcaaatattc
atggaatgacctgatatattctgccaaatagcgtcatcttgagttcattt
acctttatggtcattctcagttctggctttttcttggttctacacaacta
ctaataaaaattttcctcactattattccgtggagaaaatagtttctcct
agagactcaaattcagagaaatttgaaatctcatatcacccaacaagaaa
taagaaacaggaacataaaaactgacagcaaatgcttaggtgtatgtgga
aaaaggaaacagtcactcggtgatgtgataagaatgtagttcaatcaatt
aaaatcaattgcagagataacaaaaacctaaatttaaattttataagtca
cagttatacctctacttgtcatatgtctagatataatcaactttcttcat
gcttccttcattgagtacatttgctagattttgttttgttttgtttcttt
gttttttttgttttttttttttgttttttgagacagggtttctctgtgta
gccttggctgtcctggaactcactctgtagaccagcctgaccttgaactc
agaaatctgcctgcctctgcttcccaagtgctgggattaaaggtatgagc
caccacacgcagctcgtttgctagttttatacatacattactgaggaaat
ggaaacagcctaattggctgttgggatcagttagtgaaagtgtgatgaaa
atagtgtaagtatacaccttgaaaaataatagaaagtagtaatttataat
agacagacaggactagaaatttcagtagtatagtaatctacacttcagtg
acagatgccattattttgtgttatgaggctccagctacacctgttatatc
agaactatcaaagtgtactgcaaattagcactaacgacagctatctgtga
attagagatgaatcatactaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_68735670_68736827
seq2: B6Ng01-312M18.g_67_1190

seq1  GAATTCAAAAGAAAAAAACTTTTACTAAATTTTTAAATTCATGCTCACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGAAAAAAACTTTTACTAAATTTTTAAATTCATGCTCACTG  50

seq1  ATGGTGCTGTTATAGTTTAACCACACATAAATTCAAATGTCCTGGTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGCTGTTATAGTTTAACCACACATAAATTCAAATGTCCTGGTTAAT  100

seq1  TGATTCCCCATGATATATAACTCACTCAACATCACAGTGTTAAAACTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCCCATGATATATAACTCACTCAACATCACAGTGTTAAAACTCAC  150

seq1  AAAAAAGTAGCAGTTAGGTTTCACCTCATTGGTCGATTGTTCAAATATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTAGCAGTTAGGTTTCACCTCATTGGTCGATTGTTCAAATATTC  200

seq1  ATGGAATGACCTGATATATTCTGCCAAATAGCGTCATCTTGAGTTCATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATGACCTGATATATTCTGCCAAATAGCGTCATCTTGAGTTCATTT  250

seq1  ACCTTTATGGTCATTCTCAGTTCTGGCTTTTTCTTGGTTCTACACAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTATGGTCATTCTCAGTTCTGGCTTTTTCTTGGTTCTACACAACTA  300

seq1  CTAATAAAAATTTTCCTCACTATTATTCCGTGGAGAAAATAGTTTCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAAAATTTTCCTCACTATTATTCCGTGGAGAAAATAGTTTCTCCT  350

seq1  AGAGACTCAAATTCAGAGAAATTTGAAATCTCATATCACCCAACAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTCAAATTCAGAGAAATTTGAAATCTCATATCACCCAACAAGAAA  400

seq1  TAAGAAACAGGAACATAAAAACTGACAGCAAATGCTTAGGTGTATGTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAACAGGAACATAAAAACTGACAGCAAATGCTTAGGTGTATGTGGA  450

seq1  AAAAGGAAACAGTCACTCGGTGATGTGATAAGAATGTAGTTCAATCAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAACAGTCACTCGGTGATGTGATAAGAATGTAGTTCAATCAATT  500

seq1  AAAATCAATTGCAGAGATAACAAAAACCTAAATTTAAATTTTATAAGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAATTGCAGAGATAACAAAAACCTAAATTTAAATTTTATAAGTCA  550

seq1  CAGTTATACCTCTACTTGTCATATGTCTAGATATAATCAACTTTCTTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATACCTCTACTTGTCATATGTCTAGATATAATCAACTTTCTTCAT  600

seq1  GCTTCCTTCATTGAGTACATTTGCTAGATTTTGTTTTGTTTTGTTTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTTCATTGAGTACATTTGCTAGATTTTGTTTTGTTTTGTTTCTTT  650

seq1  GTTTTTTTTGTTTTTTTTTTTTGTTTTTTGAGACAGGGTTTCTCTGTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTGTTTTTTTTTTTTGTTTTTTGAGACAGGGTTTCTCTGTGTA  700

seq1  GCCTTGGCTGTCCTGGAACTCACTCTGTAGACCAGCCTGACCTTGAACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGGCTGTCCTGGAACTCACTCTGTAGACCAGCCTGACCTTGAACTC  750

seq1  AGAAATCTGCCTGCCTCTGCTTCCCAAGTGCTGGGATTAAAGGTATGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTGCCTGCCTCTGCTTCCCAAGTGCTGGGATTAAAGGTATGAGC  800

seq1  CACCACACGCAGCTCGTTTGCTAGTTTTATACATACATTACTGAGGAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACACGCAGCTCGTTTGCTAGTTTTATACATACATTACTGAGGAAAT  850

seq1  GGAAACAGCCTAATTGGCTGTT-GGATCAGTTAGTGAAAGTGTGATGAAA  899
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGAAACAGCCTAATTGGCTGTTGGGATCAGTTAGTGAAAGTGTGATGAAA  900

seq1  ATAGTGTAAGTATACACCTTGAAAAATAATAGAAAGTAGTAATTTATAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTAAGTATACACCTTGAAAAATAATAGAAAGTAGTAATTTATAAT  950

seq1  AGACAGACAGAACTAGAAATTTTCAGTAAGTATAGTAATCTACACTTTCA  999
      |||||||||| |||||||| ||||||| ||||||||||||||||| ||||
seq2  AGACAGACAGGACTAGAAA-TTTCAGT-AGTATAGTAATCTACAC-TTCA  997

seq1  GTGACAGATGCCAATTATTTTGTGTTATTGGAAGCTCCAAGCTACAACCC  1049
      |||||||||||| |||||||||||||||  || ||||| |||||||  ||
seq2  GTGACAGATGCC-ATTATTTTGTGTTAT--GAGGCTCC-AGCTACA--CC  1041

seq1  TG-TATATCAGGACACCTATCAAAGTGTAACTGCAAAAATAAAGAAACTA  1098
      || ||||||||   | |||||||||||| |||||  |||| |    ||||
seq2  TGTTATATCAG---AACTATCAAAGTGT-ACTGC--AAATTA--GCACTA  1083

seq1  AAAAGGGACAGCTATCTGTGTGAAATGTAGAAAGAAAAATAGGGTATATC  1148
      |     ||||||||||||||   ||| ||||           | |  |||
seq2  A----CGACAGCTATCTGTG---AAT-TAGA-----------GATGAATC  1114

seq1  ATACTAGGAT  1158
      ||||||||||
seq2  ATACTAGGAT  1124