BAC Information

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BAC

Clone NameB6Ng01-313D07
Chromosome7 (Build37)
Map Location 67,009,017 - 67,010,216
singlet/doubletsinglet
Overlap genenone
Upstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1
Downstream geneLOC664788, Snrpn, Snurf, EG664849, LOC100041201, LOC100041211, LOC664896
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313D07.bB6Ng01-313D07.g
ACCGA104484GA104485
length7811,203
definitionB6Ng01-313D07.b B6Ng01-313D07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tgggaagcaggcttcattttcacagctgaaaggaacccccctctctctcc
ctctctctgtgttagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtccctcacaccgagccagggctggctgtggctg
cctctctctatctctctccgcctggctcgtgctgtttgtggcagatgcaa
acacctccccctcgctcttgagattgcttatccccccctgccccgatctt
ttctggtgaggggaacactaacccgcccactctgcttctctcacgaaaaa
aaaaaaaaatgcaaataacaaaaacaagcccagaccagatccgacttgat
ttaagttagtgtgagggaggcaatccccctcaccaacattaacttctccc
ttaccatctccatgcggatggctctggaggtgagggggactaaaacaaca
cgctctgacctgatcacccccccatgcacaccacccatatgacttgccgt
gccagaagaattaggacaaaacaaagaaaagttgcctcacatttcgctct
cgtttttagagtgtcactcaccctcatggttctgctcaagtgtgggagag
agaacagaactgatacttttacttccaccctgccatggagagtgagaaga
acaaacagatcaacgatagctatggcattatctcaccccaagcaaggtta
cctatcagaacagagatgtaaatcctagttagatctatttatccatatcc
aggccgcgcccgggcctgctcatgctatgag
gaattctgaactctcagaggagtttgattttacctcatgcaaagacccag
aagtaatgatcagagaaggactggagccatgattgaaggctcaaaagttg
ttggcttagatatccttggaggcccaatattgctggtggagttattcaga
gctgcctcctccttcttcgactgcataggcaaggggacctatgattgccc
ttgttattggctttttctgactgcatgcttggagaagagccttcattccc
ttgaaaactatgctcaggacactggtggaggaagttgatggcaaagacct
aagagaaagtgttgagtacctgtattgcagctcacatatcatccttaagt
ccttagagtgagctgaggacccagcaagcacttgagacaaagggcatggc
atgttcacatccaaggcctgagagtaacagcaagtgagatctggaagggc
agtgtgaagaggttggtaagagcaggagtgttgagggtgcctgtgagata
tgacaagcccatagtacatggtaagcccataatccatgtggttttgcatt
ggtcccactgtaatcggggcatgttctttgtgttgtcttcacagggttgc
attccctttccagtatggtccatggaaaacatgcagaggaaatggcccca
cagcattggctgagtgtttatgtcgtccaactgagtgtccatcgaactgt
tgtggtgttgctgacttgccctaggtcacctgagttaaatggtaaggaac
atgggaattgctgcatgaattctaggtgcccaggtcttggtggagcaggg
aacggctgccattgattatgtccaggccctttcgggacatggagcatgcc
tagggcctctggtttctcccatgtttggagcttcggcccattgttccctg
gcagtggattgtcagtgtccagcagtccattgctctccccaaagcaagag
caatccagagtactggaaccacttgatgcaatgcactccaacgagcttgg
aatctatgatgattccagtcaaacattccttggaaagctgaacaaatgga
gtgaaactgtgttaccgcccactctcatcgaactgagtccagcatccttg
gttctcaaggtctatgggcgttcaagcacaggctaccaatccttcaatgt
ttctgaacttcttcagctctaagccagaaactctccagaaagaacaggtg
tgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_67009017_67010216
seq2: B6Ng01-313D07.g_65_1267 (reverse)

seq1  ACACACCTG---TCTCTGGAGAG--TCTGGC-TAGAGCCCGAAGAAGTCA  44
      |||||||||   | |||||||||  |||||| ||||| | ||||||||  
seq2  ACACACCTGTTCTTTCTGGAGAGTTTCTGGCTTAGAG-CTGAAGAAGTTC  49

seq1  AGAACAATGGAGTGGTTGGGCAGCCTGTGCCTG-ACGCCCATAGCACCTG  93
      ||||  || ||  || | || ||||||||| || |||||||||| |||| 
seq2  AGAAACATTGA-AGGATTGGTAGCCTGTGCTTGAACGCCCATAG-ACCT-  96

seq1  GGAGACCCAA-GATGCTGGACCTCAGTTCCGATGAGAGT-GGCGGT-ACA  140
       |||| |||| ||||||||| ||||||| |||||||||| |||||| |||
seq2  TGAGAACCAAGGATGCTGGA-CTCAGTT-CGATGAGAGTGGGCGGTAACA  144

seq1  GAGTTTCCACTCATTTTGTTCAGCTTTTCCAAGGAATGTTTGACTGGGAA  190
       ||||| |||||  |||||||||| |||||||||||||||||||| ||||
seq2  CAGTTT-CACTCCATTTGTTCAGC-TTTCCAAGGAATGTTTGACT-GGAA  191

seq1  TCATCATAGA-TCCAAGCTCGTTGGAGTGCATTGCATCAAGTGGTTCCAG  239
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCATCATAGATTCCAAGCTCGTTGGAGTGCATTGCATCAAGTGGTTCCAG  241

seq1  TACTCTGGAGTGCTCTGGCTTTGGGGAGAGCAATGGACTGCTGGACACTG  289
      ||||||||| |||||| |||||||||||||||||||||||||||||||||
seq2  TACTCTGGATTGCTCTTGCTTTGGGGAGAGCAATGGACTGCTGGACACTG  291

seq1  ACAATCCACTGCCAGGGAACAATGGGCCAAAGCTCAAAACATGGGAGAAA  339
      |||||||||||||||||||||||||||| |||||| ||||||||||||||
seq2  ACAATCCACTGCCAGGGAACAATGGGCCGAAGCTCCAAACATGGGAGAAA  341

seq1  CCAGAGGCCCTAGGCATGCTCCATGTCCCG-AAGGGCCTGGACATAATCA  388
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCAGAGGCCCTAGGCATGCTCCATGTCCCGAAAGGGCCTGGACATAATCA  391

seq1  ATGGCAGCTGTTCCCTGCTCCACCAAGACCTGGGCACCTAGAATTCATGC  438
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGCCGTTCCCTGCTCCACCAAGACCTGGGCACCTAGAATTCATGC  441

seq1  AGCAATTCCCATGTTCCTTACCATTTAACTCAGGTGACCTAGGGCAAGTC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTCCCATGTTCCTTACCATTTAACTCAGGTGACCTAGGGCAAGTC  491

seq1  AGCAACACCACAACAGTTCGATGGAGACTCAGTTGGACGACATAAACACT  538
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGCAACACCACAACAGTTCGATGGACACTCAGTTGGACGACATAAACACT  541

seq1  CAGCCAATGCTGTGGGGCCATTTCCTCTGCATGTTTTCCATGGACCATTC  588
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CAGCCAATGCTGTGGGGCCATTTCCTCTGCATGTTTTCCATGGACCATAC  591

seq1  TGGAAAGGGAATGCAACCCTGTGAAGACAACACAAAGAACATGCCCTGAT  638
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGGAAAGGGAATGCAACCCTGTGAAGACAACACAAAGAACATGCCCCGAT  641

seq1  TACAGTGGGACCAATGCAAAACCACATGGATTATGGGCTTACCATGTACT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGGGACCAATGCAAAACCACATGGATTATGGGCTTACCATGTACT  691

seq1  ATGGGCTTGTCATATCTCACAGGCACCCTCAACACTCCTGCTCTTACCAA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTTGTCATATCTCACAGGCACCCTCAACACTCCTGCTCTTACCAA  741

seq1  CCTCTTCACACTGCCCTTCCAGATCTCACTTGCTGTTACTCTCAGGCCTT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCACACTGCCCTTCCAGATCTCACTTGCTGTTACTCTCAGGCCTT  791

seq1  GGATGTGAACATGCCATGCCCTTTGTCTCAAGTGCTTGCTGGGTCCTCAG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGAACATGCCATGCCCTTTGTCTCAAGTGCTTGCTGGGTCCTCAG  841

seq1  CTCACTCTAAGGACTTAAGGATGATATGTGAGCTGCAATACTGGTACTCA  888
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTCACTCTAAGGACTTAAGGATGATATGTGAGCTGCAATACAGGTACTCA  891

seq1  ACACTTTCTCTTAGGTCTTTGCCATCAACTTCCTCCACCAGTGTCCTGAG  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTCTCTTAGGTCTTTGCCATCAACTTCCTCCACCAGTGTCCTGAG  941

seq1  CATAGTTTTCACGGGAATGAAGGCTCTTCTCCAAGCATGCAGTCAGAAAA  988
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTTTCAAGGGAATGAAGGCTCTTCTCCAAGCATGCAGTCAGAAAA  991

seq1  AGCCAATAACAAGGGCAATCATAGGTCCCCTTGCCTATGCAGTCGAAGAA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAATAACAAGGGCAATCATAGGTCCCCTTGCCTATGCAGTCGAAGAA  1041

seq1  GGAGGAGGCAGCTCTGAATAACTCCACCAGCAAAATTGGGCCTCCAAGGA  1088
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGAGGAGGCAGCTCTGAATAACTCCACCAGCAATATTGGGCCTCCAAGGA  1091

seq1  TATCTAAGCCAACAACTTTTGAGCCTTCAATCATGGCTCCAGTCCTTCTC  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAGCCAACAACTTTTGAGCCTTCAATCATGGCTCCAGTCCTTCTC  1141

seq1  TGATCATTGCTTCTGGGACTTTGCATGAGGTAAAATCAAACTCCTCTGAG  1188
      |||||||| |||||||| ||||||||||||||||||||||||||||||||
seq2  TGATCATTACTTCTGGGTCTTTGCATGAGGTAAAATCAAACTCCTCTGAG  1191

seq1  AGTTCAGAATTC  1200
      ||||||||||||
seq2  AGTTCAGAATTC  1203