BAC Information

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BAC

Clone NameB6Ng01-313H02
Chromosome7 (Build37)11 (Build37)
Map Location 86,576,434 - 86,577,61957,898,020 - 57,898,069
singlet/doubletsingletsinglet
Overlap geneBC025462
Upstream geneNtrk3, Mrpl46, Mrps11, Det1, Isg20l1, Isg20, Acan, Hapln3, Mfge8, Abhd2, Rlbp1
Downstream genePolg, AI854517, Rhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep, Ap3s2, 2610034B18Rik, Zfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313H02.bB6Ng01-313H02.g
ACCGA104656GA104657
length1,178101
definitionB6Ng01-313H02.b B6Ng01-313H02.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(86,576,434 - 86,577,619)(57,898,020 - 57,898,069)
sequence
gaattctcatgtagctttaatttcccagtagactgatttttcaagtgagg
aggacccaagacttggagagctgtcaacatcagtagtaagtgaaagtact
ggtttagactcaggcagtctgactcataagtctaggctctttttaagaat
cttttactcgttgacagcttcatgcgtgtatataatacatcttgatcatg
acctcaggtacctccagtttcccagcaccccctccgccaacgcattccct
gcccaccttcatgtcttctcctttttacttactgtaacccgctgagtcca
atccttcctgcagcctgtcctcatcggacttccctgagaatgctgaccgc
ctctgcagacgtaggggcggatatgaggggagtaaaaaagttagaaagtt
accttgatcagtgctgtgagtggatgcaagcaggccaaaggattcacatt
tgttacatcattcttctgcagttgggaaaagcgccttaggaaggctaagg
tgccatcagcttcagcagttaaaaactcaaggattcatgagtcgcggttt
ttctgtctatacacagttaaaacagttctatgagccagagcctgatctgc
tacctcctctgaaactaggagcttgtgttctgacccaaggaagtcagatc
tttctacaagagccgctggtaagacgtggcgcctgcctgcagccactgtc
ccctcgtcggtggtaaggttgatctacagctggttccgttctccctgaag
ctttcccagttctttctaggagtttttacttttccatgtcggttattggt
gacccatcatgagattgatttattgtattttatgtgtatgagtatttgcc
tgcaaggacatatgtgtgttatataggcgcctggtgcctagcggcattag
attccttggaactggagttgtgaaccacagcatgattgctgaaactggaa
cccagatcctctaggagcagcaagtgctactgctgagccgtctctccagc
ccctacttaggatcttctggtcagtagtactttcactaatcctgacagcc
gccttcttctagagtcatgcctgtcacttatagaacctgcttatacactg
tgagttagagatgcacagtgtgagcgacagatctgctccagctgcggagg
aacttgaagtacccctctctgatccttg
aaggccagcctggtctacagagtgagttctggggcagccagggctacaca
gcgggggggggggggctgtaggaggattacttgcaaatttgaaagtagcc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_86576434_86577619
seq2: B6Ng01-313H02.b_45_1222

seq1  GAATTCTCATGTAGCTTTAATTTCCCAGTAGACTGATTTTTCAAGTGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGTAGCTTTAATTTCCCAGTAGACTGATTTTTCAAGTGAGG  50

seq1  AGGACCCAAGACTTGGAGAGCTGTCAACATCAGTAGTAAGTGAAAGTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCCAAGACTTGGAGAGCTGTCAACATCAGTAGTAAGTGAAAGTACT  100

seq1  GGTTTAGACTCAGGCAGTCTGACTCATAAGTCTAGGCTCTTTTTAAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAGACTCAGGCAGTCTGACTCATAAGTCTAGGCTCTTTTTAAGAAT  150

seq1  CTTTTACTCGTTGACAGCTTCATGCGTGTATATAATACATCTTGATCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACTCGTTGACAGCTTCATGCGTGTATATAATACATCTTGATCATG  200

seq1  ACCTCAGGTACCTCCAGTTTCCCAGCACCCCCTCCGCCAACGCATTCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGGTACCTCCAGTTTCCCAGCACCCCCTCCGCCAACGCATTCCCT  250

seq1  GCCCACCTTCATGTCTTCTCCTTTTTACTTACTGTAACCCGCTGAGTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACCTTCATGTCTTCTCCTTTTTACTTACTGTAACCCGCTGAGTCCA  300

seq1  ATCCTTCCTGCAGCCTGTCCTCATCGGACTTCCCTGAGAATGCTGACCGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCCTGCAGCCTGTCCTCATCGGACTTCCCTGAGAATGCTGACCGC  350

seq1  CTCTGCAGACGTAGGGGCGGATATGAGGGGAGTAAAAAAGTTAGAAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCAGACGTAGGGGCGGATATGAGGGGAGTAAAAAAGTTAGAAAGTT  400

seq1  ACCTTGATCAGTGCTGTGAGTGGATGCAAGCAGGCCAAAGGATTCACATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGATCAGTGCTGTGAGTGGATGCAAGCAGGCCAAAGGATTCACATT  450

seq1  TGTTACATCATTCTTCTGCAGTTGGGAAAAGCGCCTTAGGAAGGCTAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACATCATTCTTCTGCAGTTGGGAAAAGCGCCTTAGGAAGGCTAAGG  500

seq1  TGCCATCAGCTTCAGCAGTTAAAAACTCAAGGATTCATGAGTCGCGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCAGCTTCAGCAGTTAAAAACTCAAGGATTCATGAGTCGCGGTTT  550

seq1  TTCTGTCTATACACAGTTAAAACAGTTCTATGAGCCAGAGCCTGATCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTATACACAGTTAAAACAGTTCTATGAGCCAGAGCCTGATCTGC  600

seq1  TACCTCCTCTGAAACTAGGAGCTTGTGTTCTGACCCAAGGAAGTCAGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCTCTGAAACTAGGAGCTTGTGTTCTGACCCAAGGAAGTCAGATC  650

seq1  TTTCTACAAGAGCCGCTGGTAAGACGTGGCGCCTGCCTGCAGCCACTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACAAGAGCCGCTGGTAAGACGTGGCGCCTGCCTGCAGCCACTGTC  700

seq1  CCCTCGTCGGTGGTAAGGTTGATCTACAGCTGGTTCCGTTCTCCCTGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCGTCGGTGGTAAGGTTGATCTACAGCTGGTTCCGTTCTCCCTGAAG  750

seq1  CTTTCCCAGTTCTTTCTAGGAGTTTTTACTTTTCCATGTCGGTTATTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCAGTTCTTTCTAGGAGTTTTTACTTTTCCATGTCGGTTATTGGT  800

seq1  GACCCATCATGAGATTGATTTATTGTATTTTATGTGTATGAGTATTTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCATCATGAGATTGATTTATTGTATTTTATGTGTATGAGTATTTGCC  850

seq1  TGCAAGGACATATGTGTGTTATATAGGCGCCTGGTGCCTAGCGGCATTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGACATATGTGTGTTATATAGGCGCCTGGTGCCTAGCGGCATTAG  900

seq1  ATTCCTTGGAACTGGAGTTGTGAACCACAGCATGATTGCTGAAACTGGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTGGAACTGGAGTTGTGAACCACAGCATGATTGCTGAAACTGGAA  950

seq1  CCCAGATCCTCTAGGAGCAGCAAGTGCCACTGCTGAGCCGTCTCTCCAGC  1000
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCCAGATCCTCTAGGAGCAGCAAGTGCTACTGCTGAGCCGTCTCTCCAGC  1000

seq1  CCCTACTTAGGATCTCTTGGTCAAGTAGTAC-TTCACTAATCCTGACAGC  1049
      |||||||||||||||  ||||| |||||||| ||||||||||||||||||
seq2  CCCTACTTAGGATCTTCTGGTC-AGTAGTACTTTCACTAATCCTGACAGC  1049

seq1  CGCCTCTTCCTAAGAGTCATGCCTGTCACTTATAGACCCTTGGTTATACA  1099
      |||||  | || |||||||||||||||||||||||| || || |||||||
seq2  CGCCTTCTTCT-AGAGTCATGCCTGTCACTTATAGAACC-TGCTTATACA  1097

seq1  CTGTTGGAAGTAGAGATGCACAGTG-GAGCGAACAGATCTGCTTCCCCAG  1148
      ||||  ||  ||||||||||||||| ||||| |||||||||||   ||||
seq2  CTGT--GAGTTAGAGATGCACAGTGTGAGCG-ACAGATCTGCT---CCAG  1141

seq1  TCTGCGGGGAGGAACTGGGA-TGACCCTCTCTG-TCCTTG  1186
       ||||  ||||||||| | | |  ||||||||| ||||||
seq2  -CTGC--GGAGGAACTTGAAGTACCCCTCTCTGATCCTTG  1178

seq1: chr11_57898020_57898069
seq2: B6Ng01-313H02.g_72_121

seq1  AGGCCAGCCTGGTCTACAGAGTGAGGTCTGGGACAGCCAGGGCTACACAG  50
      ||||||||||||||||||||||||| |||||| |||||||||||||||||
seq2  AGGCCAGCCTGGTCTACAGAGTGAGTTCTGGGGCAGCCAGGGCTACACAG  50