BAC Information

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BAC

Clone NameB6Ng01-313L10
Chromosome2 (Build37)7 (Build37)
Map Location 86,727,166 - 86,727,49814,999,111 - 15,000,225
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneOlfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1
Downstream geneOlfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313L10.bB6Ng01-313L10.g
ACCGA104847GA104848
length1,0071,121
definitionB6Ng01-313L10.b B6Ng01-313L10.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(86,727,166 - 86,727,498)(14,999,111 - 15,000,225)
sequence
gaattcattgttatctcatattcttagctcatataaaaccccaccattgt
tttccttcccacacagtccctcactcctctttttttacattaatttattt
atttttattattttctttatatacatttcaaatgctatcctgaaagttcc
ctatacctccccctctgccctgctcccctactcacccactccctcttctt
ggccctggcatttcatgtactggagcataaaaagtttgcaaataccaagg
ggcctctcttcccagtgatggccgactaggccatcttctgctacatatgc
agctagagacacaagctctggggtactggttaattcatattgttgttcca
cctatagggttgcagacaccttcagctacttggctgctttctctagcttc
tccattgggggccctgtgttccatctgatagaagactgtgagcatccact
tctgtatttgccagtcactggcatagcctcatacgagacagctataacag
ggtcccttcagcaaaaccttgctggcatatgcaatagtgtctgggtttgg
tggctgattatggaatagatccccaggtggggtagtctctgaatactcca
cccttttgtcttagctccaaattttgtctctgtaacttctttcatgagta
ttaggttccctattctaaggaggaacgaagtatccacccattggtcttcc
ctcttcttgattttcttttgttttgcaaattgtatcttgggtgttctatg
tttctaggttaatatccacttatcagtgagtacatatctaatgacttctt
ttgtgattgggttacctcactaagaatgacatcctccagatacatccatt
tgaccaagaatttcataaattcattctttttaatagctgagtagcacacc
attatgtaaatgtaccacagttctgtattcattcttctgttgagggacat
ctgggttctttccagcttctgtataaataagttgctatgaacatggtgga
gcatgtg
gaattcacagatcttcttgatggtatttcttgtatcctgaaggaaaacaa
aaataccagtgggatttgaacctgaacaacaaaataacaggaattgagaa
gggtgaaagagaaggagaagaatagagaatgaaagtaataaataaaggga
atgaggtttgggaatgctgaaaaggctcaagggagaggaagcaaaagtga
gaagtaacatcaccatttgtcctctgacctccacatgtccacaatgacaa
caaatatagaagagcacatacaggttccatcagtcacagacacacacaca
cacacacacacacacacacacacacacactcacaaactcacatacattca
cacactgtttgaaagcatatgagggccgaaggaatggctcaacacatgcc
cattgaagggagcctggattttgtttcaataactctcatcagttagctca
gaattggttgatactccaactctgagaattcatctccttgtctggactct
gcaagtactttcactcatggaccacaactaactctttcccgaaccctact
cacaaattaaatcaatcatttggatatggttgtgtaggcttgtaatctca
ggactttggaaacaaaagcagtcacatttctctgagtttgagacaagtct
ggtctacatagtgagtaccagcatcatcactgttatatagatagagcatc
aaaatcaaagatattattaaatgaataaaataaatctttagtaatttgtg
ttccatgatttctcacatacacacatgagtgcacacacaaacacacacag
atatccatgcatatatattatcaatgaagaggcaaacaaatgtaaaaaaa
aaaattgttcaggagtctggcatattgatgtataaccaaatttcccagca
ctttgggagttacagagagaatggagagttcaagggtacccagtcacaca
aagtaagtttgagaactacctggatccatgagacctaaatctaagaacaa
aacttccacaagaagcagcacaggaagaccctgacaaagtcagtcattga
gttatgggaggaccatgttctgtgagccgaggaggtggctagctgaaact
gggaaataactatgagtgcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86727166_86727498
seq2: B6Ng01-313L10.b_126_343

seq1  TCTTTTTTTACATTAATTTATTTATTTGTTCACATTACATCCAGATCCCA  50
                                                        
seq2  --------------------------------------------------  0

seq1  GAGCACCACACCTGAGTACCAACGTGCCCTGGTAGGATCAAGCTACACAT  100
                                                       |
seq2  -------------------------------------------------T  1

seq1  CTGCTACATGCCTACATATAACACTATTTTTAAACAATTTTTATTAGATA  150
      ||      |   ||||| |||   | | |||     ||||||||    ||
seq2  CT-----TTTTTTACAT-TAA---TTTATTT-----ATTTTTAT----TA  33

seq1  TTTTCTTCATTTACATTTTAAATGCTATTCCAAAAGTCCTCTATACC-CT  199
      ||||||| || ||||||| ||||||||| |  ||||| | ||||||| | 
seq2  TTTTCTTTATATACATTTCAAATGCTATCCTGAAAGTTCCCTATACCTCC  83

seq1  ACCCCCACCCTGTTCCCCAACACACCCACTCTTGCTTCCTGGCCATGACA  249
       || |  ||||| ||||| || |||||||||   |||| ||||| || ||
seq2  CCCTCTGCCCTGCTCCCCTACTCACCCACTCCCTCTTCTTGGCCCTGGCA  133

seq1  TTCCCCTGTACTGGGGCATATAA--TTTTCACAAGACCAA-GGGTCTCTC  296
      ||  | |||||||| ||||| ||  ||| || || ||||| ||| |||||
seq2  TT-TCATGTACTGGAGCATAAAAAGTTTGCA-AATACCAAGGGGCCTCTC  181

seq1  CTCCCAGTGATGGACGACTAGACCATCTTCTGCTACA  333
       |||||||||||| ||||||| |||||||||||||||
seq2  TTCCCAGTGATGGCCGACTAGGCCATCTTCTGCTACA  218

seq1: chr7_14999111_15000225
seq2: B6Ng01-313L10.g_69_1189

seq1  GAATTCACAGATCTTCTTGATGGTATTTCTTGTATCCTGAAGGAAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGATCTTCTTGATGGTATTTCTTGTATCCTGAAGGAAAACAA  50

seq1  AAATACCAGTGGGATTTGAACCTGAACAACAAAATAACAGGAATTGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCAGTGGGATTTGAACCTGAACAACAAAATAACAGGAATTGAGAA  100

seq1  GGGTGAAAGAGAAGGAGAAGAATAGAGAATGAAAGTAATAAATAAAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAAAGAGAAGGAGAAGAATAGAGAATGAAAGTAATAAATAAAGGGA  150

seq1  ATGAGGTTTGGGAATGCTGAAAAGGCTCAAGGGAGAGGAAGCAAAAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTTTGGGAATGCTGAAAAGGCTCAAGGGAGAGGAAGCAAAAGTGA  200

seq1  GAAGTAACATCACCATTTGTCCTCTGACCTCCACATGTCCACAATGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAACATCACCATTTGTCCTCTGACCTCCACATGTCCACAATGACAA  250

seq1  CAAATATAGAAGAGCACATACAGGTTCCATCAGTCACAGACACACACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATAGAAGAGCACATACAGGTTCCATCAGTCACAGACACACACACA  300

seq1  CACACACACACACACACACACACACACACTCACAAACTCACATACATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACTCACAAACTCACATACATTCA  350

seq1  CACACTGTTTGAAAGCATATGAGGGCCGAAGGAATGGCTCAACACATGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGTTTGAAAGCATATGAGGGCCGAAGGAATGGCTCAACACATGCC  400

seq1  CATTGAAGGGAGCCTGGATTTTGTTTCAATAACTCTCATCAGTTAGCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAAGGGAGCCTGGATTTTGTTTCAATAACTCTCATCAGTTAGCTCA  450

seq1  GAATTGGTTGATACTCCAACTCTGAGAATTCATCTCCTTGTCTGGACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGGTTGATACTCCAACTCTGAGAATTCATCTCCTTGTCTGGACTCT  500

seq1  GCAAGTACTTTCACTCATGGACCACAACTAACTCTTTCCCGAACCCTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTACTTTCACTCATGGACCACAACTAACTCTTTCCCGAACCCTACT  550

seq1  CACAAATTAAATCAATCATTTGGATATGGTTGTGTAGGCTTGTAATCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATTAAATCAATCATTTGGATATGGTTGTGTAGGCTTGTAATCTCA  600

seq1  GGACTTTGGAAACAAAAGCAGTCACATTTCTCTGAGTTTGAGACAAGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTGGAAACAAAAGCAGTCACATTTCTCTGAGTTTGAGACAAGTCT  650

seq1  GGTCTACATAGTGAGTACCAGCATCATCACTGTTATATAGATAGAGCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTACATAGTGAGTACCAGCATCATCACTGTTATATAGATAGAGCATC  700

seq1  AAAATCAAAGATATTATTAAATGAATAAAATAAATCTTTAGTAATTTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAAAGATATTATTAAATGAATAAAATAAATCTTTAGTAATTTGTG  750

seq1  TTCCATGATTTCTCACATACACACATGAGTGCACACACAAACACACACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGATTTCTCACATACACACATGAGTGCACACACAAACACACACAG  800

seq1  ATATCCATGCATATATATTATCAATGAAGAGGCAAACAAATGT-AAAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATATCCATGCATATATATTATCAATGAAGAGGCAAACAAATGTAAAAAAA  850

seq1  AAAATTGTTCAGGAGTCTGGCATATTGATGTATAACCAAA-TTCCCAGCA  898
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAAATTGTTCAGGAGTCTGGCATATTGATGTATAACCAAATTTCCCAGCA  900

seq1  CTTT-GGAGTTACAGAGAGAATGGAGAGTTCAAGGGTACCCAGTCACACA  947
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGAGTTACAGAGAGAATGGAGAGTTCAAGGGTACCCAGTCACACA  950

seq1  AAGTAAGTTGGAG-ACTACCCTGGATCCATGAGACCCTAAATCTAAG-AC  995
      ||||||||| ||| |||| ||||||||||||||| |||||||||||| ||
seq2  AAGTAAGTTTGAGAACTA-CCTGGATCCATGAGA-CCTAAATCTAAGAAC  998

seq1  AAAAC-TCCACAAGAAGCAGCACAGGAAGA-CCTGACAAAGTCAGTCATT  1043
      ||||| |||||||||||||||||||||||| |||||||||||||||||||
seq2  AAAACTTCCACAAGAAGCAGCACAGGAAGACCCTGACAAAGTCAGTCATT  1048

seq1  GAGTTATGGGAGGACCATG-TCTGTGAGCCGAGGAGGTGCGAAGCTGAGA  1092
      ||||||||||||||||||| |||||||||||||||||||   |||||| |
seq2  GAGTTATGGGAGGACCATGTTCTGTGAGCCGAGGAGGTGGCTAGCTGAAA  1098

seq1  CTGGAGAATAACTATGAGTGCGA  1115
      ||||  |||||||||||||||||
seq2  CTGGGAAATAACTATGAGTGCGA  1121