BAC Information

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BAC

Clone NameB6Ng01-314A15
Chromosome7 (Build37)
Map Location 82,175,797 - 82,298,675
singlet/doubletdoublet
Overlap geneSv2b
Upstream geneLOC100042127, LOC100042140, LOC546979, Slco3a1, EG665308, EG665641, 0610006L08Rik
Downstream gene1500012K07Rik, LOC100042171, Akap13, Klhl25, LOC100042210
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314A15.bB6Ng01-314A15.g
ACCGA105088GA105089
length1,0291,157
definitionB6Ng01-314A15.b B6Ng01-314A15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,297,671 - 82,298,675)(82,175,797 - 82,176,950)
sequence
gaattcaccttagactccctgccaggccgaagcacagtgattcccagggt
gcaaaccatcctgagaatattttctagatgatattaatggcgctagcttt
cctcctggaagcagtaggcatggctactctgtttacagggcacaggtaca
aaggcagcatgtcttcaactcagacagcaagcagtgaggccatgacttcc
tctggttagatcagcctaaaacaggctctcacctcaaccaggcaccactt
acttggaagatgcaggtcctggctgggctagaaagtacgtctttcttcac
ccatggaagcgagcacaggatgatccatgccatgtgtctgcagcacagtg
ggtgaagtggggcaggaagggtggaaatgggtgatgtgagaggagagaat
agtcacagtaatcattaccacctgcattagtttataaaccttacctaaac
acacacacacacacacacacacacacacacacacacaccctcctgaatgc
atggtttcttttttgactttgctttttaagacaggatttcatgttgtggc
cttggttggccttgaacttgcggcagccctcctacttctgtgttaacttg
ttgggattacaggcatgtactaaaatggtggggagcagacgagaccaaaa
tgaaaaggccatgtggagggaccacatggttttggtctggtcactgctgg
ctgacggtagtgcttgtggctaaatatttttaccccaaatggataggaac
tttctttattcttatgcctgtatgaaatctgtgactttcatattctaatt
tagaagttagcgggtttaatcaaagtgggcattttgctttggagaaaaaa
ctatttctagacatgatttcagcagaatcagaatacagcaagagcaatta
cttaataatccattttagttgcttttgcaagagggtattcattgggagtc
ctggcctccagaaaatttgggcaactgatttcagaagaaaggaaagttgg
ctaaaaactccagagtctttcgtcctcct

gaattcctatattgacactgttccgtgaatgtcatggaacatacactgta
tagttttaatttgattttaatttatgagtctatttactttatgtatttac
atgctttctacatttaagtgatgactaaaaattcatgttttgaccacatt
gcatgcactttatgtacatctctctgattaaagtatatccagcaagaaag
caatttatacttccacaattcaataacatatctatgtttaaaataaacat
agatatgaaacagactttgatagatatacaaatattatatagtatgatgt
taaggtttttatattgatctaaattttaaaggtctcatcactttaatata
aatcaggcagtacatagatttttctttttaccaaaatacttaatttagat
agcatattctagagtatataaatactattcaggaaaaaattatttctaaa
aatatacttatccaggtggagaaatcctagaagctatataaggccccaga
aataattactgctgactttttaaaataaatacagaaactatatttgagaa
taaatattatttatctaacagagaattatgaaattatgtaaaagaaatga
ataagaacctgatatttgtaccatgtaaacatactctatataaaaacata
aatgttctacttaaagactctagcatttatagaatctttcccccaaaaaa
gtaacaaaaaatgatagtttccaattccttcccatattactgactgattg
tcatcactaaagaaacttgatactgcagtgtctgggataatctatatgga
gactagtcctcacgaatggactcactagcagtgggctatgtgtcactagg
tggtgaaaagattaagttttctattacttctcagctcctctttaaataaa
actgtccaggacaacgttagtggctgtaggtgtaaggaggcagtcttcaa
caacctgagttcctcaccatgactcagaacctccagtgcaagccagaaca
cataacactgacacacacacacacacacacacacacgggagagtgagctt
gtgtcctcttatacatcagcctactttaagtctccccccacatctaggct
tttctcctggattagctcaagacttattttaaaactttctttgagaggtc
caaggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_82297671_82298675
seq2: B6Ng01-314A15.b_43_1071 (reverse)

seq1  AGGAGG----AGGACTCT-GAGTTTT--GCC-ACTTT-CTTTC-TCTG-A  39
      ||||||    | |||||| |||||||  ||| ||||| ||||| |||| |
seq2  AGGAGGACGAAAGACTCTGGAGTTTTTAGCCAACTTTCCTTTCTTCTGAA  50

seq1  ATCAGTTGCCCAAA-TTTCTGGA-GCCAGGACTCCC-ATG-ATTCCCTCT  85
      |||||||||||||| |||||||| |||||||||||| ||| || ||||||
seq2  ATCAGTTGCCCAAATTTTCTGGAGGCCAGGACTCCCAATGAATACCCTCT  100

seq1  TGCAAAAGCAACT-AAATGGATTATTAAGTAATTGCTCTTGCTGTATTCT  134
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGCAAAAGCAACTAAAATGGATTATTAAGTAATTGCTCTTGCTGTATTCT  150

seq1  GATTCTGCTG-AATCATGTCTAG-AATAGTTTTTTCTCC-AAGC-AAATG  180
      |||||||||| |||||||||||| ||||||||||||||| |||| |||||
seq2  GATTCTGCTGAAATCATGTCTAGAAATAGTTTTTTCTCCAAAGCAAAATG  200

seq1  CCCACTTTGATTAAA-CCGCT-ACTTCTAAATTAGAATATGAAAGTCACA  228
      ||||||||||||||| ||||| ||||||||||||||||||||||||||||
seq2  CCCACTTTGATTAAACCCGCTAACTTCTAAATTAGAATATGAAAGTCACA  250

seq1  GATTTCATACAGGCATAAGAATAAAGAAAGTTCCTATCCATTTGGGGT-A  277
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GATTTCATACAGGCATAAGAATAAAGAAAGTTCCTATCCATTTGGGGTAA  300

seq1  AAATATTTAGCCACAAGCACTACCGTCAGCCAGCAGTGACCAGACCAAAA  327
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTAGCCACAAGCACTACCGTCAGCCAGCAGTGACCAGACCAAAA  350

seq1  CCATGTGGTCCCTCCACATGGCC-TTTCATTTTGGTCTCGTCTGCTCCCC  376
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCATGTGGTCCCTCCACATGGCCTTTTCATTTTGGTCTCGTCTGCTCCCC  400

seq1  ACCATTTTAGTACATGCCTGTAATCCCAACAAGTTAACACAGAAGTAGGA  426
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTTAGTACATGCCTGTAATCCCAACAAGTTAACACAGAAGTAGGA  450

seq1  GGGCTGCCGCAAGTTCAAGGCCAACCAAGGCCACAACATGAAATCCTGTC  476
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGCCGCAAGTTCAAGGCCAACCAAGGCCACAACATGAAATCCTGTC  500

seq1  TTAAAAAGCAAAGTCAAAAAAGAAACCATGCATTCAGGAGGGTGTGTGTG  526
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGCAAAGTCAAAAAAGAAACCATGCATTCAGGAGGGTGTGTGTG  550

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAGGTAAGGTTTATAAAC  576
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAGGTAAGGTTTATAAAC  600

seq1  TAATGCAGGTGGTAATGATTACTGTGACTATTCTCTCCTCTCACATCACC  626
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCAGGTGGTAATGATTACTGTGACTATTCTCTCCTCTCACATCACC  650

seq1  CATTTCCACCCTTCCTGCCCCACTTCACCCACTGTGCTGCAGACACATGG  676
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCACCCTTCCTGCCCCACTTCACCCACTGTGCTGCAGACACATGG  700

seq1  CATGGATCATCCTGTGCTCGCTTCCATGGGTGAAGAAAGACGTACTTTCT  726
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGATCATCCTGTGCTCGCTTCCATGGGTGAAGAAAGACGTACTTTCT  750

seq1  AGCCCAGCCAGGACCTGCATCTTCCAAGTAAGTGGTGCCTGGTTGAGGTG  776
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGCCAGGACCTGCATCTTCCAAGTAAGTGGTGCCTGGTTGAGGTG  800

seq1  AGAGCCTGTTTTAGGCTGATCTAACCAGAGGAAGTCATGGCCTCACTGCT  826
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTGTTTTAGGCTGATCTAACCAGAGGAAGTCATGGCCTCACTGCT  850

seq1  TGCTGTCTGAGTTGAAGACATGCTGCCTTTGTACCTGTGCCCTGTAAACA  876
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCTGAGTTGAAGACATGCTGCCTTTGTACCTGTGCCCTGTAAACA  900

seq1  GAGTAGCCATGCCTACTGCTTCCAGGAGGAAAGCTAGCGCCATTAATATC  926
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGCCATGCCTACTGCTTCCAGGAGGAAAGCTAGCGCCATTAATATC  950

seq1  ATCTAGAAAATATTCTCAGGATGGTTTGCACCCTGGGAATCACTGTGCTT  976
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGAAAATATTCTCAGGATGGTTTGCACCCTGGGAATCACTGTGCTT  1000

seq1  CGGCCTGGCAGGGAGTCTAAGGTGAATTC  1005
      |||||||||||||||||||||||||||||
seq2  CGGCCTGGCAGGGAGTCTAAGGTGAATTC  1029


seq1: chr7_82175797_82176950
seq2: B6Ng01-314A15.g_69_1225

seq1  GAATTCCTATATTGACACTGTTCCGTGAATGTCATGGAACATACACTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATATTGACACTGTTCCGTGAATGTCATGGAACATACACTGTA  50

seq1  TAGTTTTAATTTGATTTTAATTTATGAGTCTATTTACTTTATGTATTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTAATTTGATTTTAATTTATGAGTCTATTTACTTTATGTATTTAC  100

seq1  ATGCTTTCTACATTTAAGTGATGACTAAAAATTCATGTTTTGACCACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTCTACATTTAAGTGATGACTAAAAATTCATGTTTTGACCACATT  150

seq1  GCATGCACTTTATGTACATCTCTCTGATTAAAGTATATCCAGCAAGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCACTTTATGTACATCTCTCTGATTAAAGTATATCCAGCAAGAAAG  200

seq1  CAATTTATACTTCCACAATTCAATAACATATCTATGTTTAAAATAAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTATACTTCCACAATTCAATAACATATCTATGTTTAAAATAAACAT  250

seq1  AGATATGAAACAGACTTTGATAGATATACAAATATTATATAGTATGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGAAACAGACTTTGATAGATATACAAATATTATATAGTATGATGT  300

seq1  TAAGGTTTTTATATTGATCTAAATTTTAAAGGTCTCATCACTTTAATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTTTTTATATTGATCTAAATTTTAAAGGTCTCATCACTTTAATATA  350

seq1  AATCAGGCAGTACATAGATTTTTCTTTTTACCAAAATACTTAATTTAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGCAGTACATAGATTTTTCTTTTTACCAAAATACTTAATTTAGAT  400

seq1  AGCATATTCTAGAGTATATAAATACTATTCAGGAAAAAATTATTTCTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATTCTAGAGTATATAAATACTATTCAGGAAAAAATTATTTCTAAA  450

seq1  AATATACTTATCCAGGTGGAGAAATCCTAGAAGCTATATAAGGCCCCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACTTATCCAGGTGGAGAAATCCTAGAAGCTATATAAGGCCCCAGA  500

seq1  AATAATTACTGCTGACTTTTTAAAATAAATACAGAAACTATATTTGAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTACTGCTGACTTTTTAAAATAAATACAGAAACTATATTTGAGAA  550

seq1  TAAATATTATTTATCTAACAGAGAATTATGAAATTATGTAAAAGAAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTATTTATCTAACAGAGAATTATGAAATTATGTAAAAGAAATGA  600

seq1  ATAAGAACCTGATATTTGTACCATGTAAACATACTCTATATAAAAACATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAACCTGATATTTGTACCATGTAAACATACTCTATATAAAAACATA  650

seq1  AATGTTCTACTTAAAGACTCTAGCATTTATAGAATCTTTCCCCCAAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCTACTTAAAGACTCTAGCATTTATAGAATCTTTCCCCCAAAAAA  700

seq1  GTAACAAAAAATGATAGTTTCCAATTCCTTCCCATATTACTGACTGATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAAAAAATGATAGTTTCCAATTCCTTCCCATATTACTGACTGATTG  750

seq1  TCATCACTAAAGAAACTTGATACTGCAGTGTCTGGGATAATCTATATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACTAAAGAAACTTGATACTGCAGTGTCTGGGATAATCTATATGGA  800

seq1  GACTAGTCCTCACGAATGGACTCACTAGCAGTGGGCTATGTGTCACTAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGTCCTCACGAATGGACTCACTAGCAGTGGGCTATGTGTCACTAGG  850

seq1  TGGTGAAAAGATTAAGTTTTCTATTACTTCTCAGCTCCTCTTTAAATAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAAAAGATTAAGTTTTCTATTACTTCTCAGCTCCTCTTTAAATAAA  900

seq1  ACTGTCCAGGACAACGTTAGTGGCTGTAGGTGTAAGGAGGCAGTCTTCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCAGGACAACGTTAGTGGCTGTAGGTGTAAGGAGGCAGTCTTCAA  950

seq1  CAACCTGAGTTCCTCACCATGACTCAGAACCTCCAAGTGCAAGCCAAGAA  1000
      |||||||||||||||||||||||||||||||||| |||||||||| ||||
seq2  CAACCTGAGTTCCTCACCATGACTCAGAACCTCC-AGTGCAAGCC-AGAA  998

seq1  CACAT-ACACTGAACACACACACACACACACACACACACGGAAGAAGTGA  1049
      ||||| |||||| |||||||||||||||||||||||||||| || |||||
seq2  CACATAACACTG-ACACACACACACACACACACACACACGGGAG-AGTGA  1046

seq1  GCTTGTGTCCTCTTATACATCAGCCTACTTTTAGTCTCCCCCACAATCTA  1099
      ||||||||||||||||||||||||||||||| ||||||||||   |||||
seq2  GCTTGTGTCCTCTTATACATCAGCCTACTTTAAGTCTCCCCCCACATCTA  1096

seq1  -GCTTTTCTC--TGATTAGCTCAAAGGACTATTTTTAAAAATTTC---GT  1143
       |||||||||   |||||||||||  ||||  |||||||| ||||   | 
seq2  GGCTTTTCTCCTGGATTAGCTCAA--GACTTATTTTAAAACTTTCTTTGA  1144

seq1  GAGGTC--AGGCC  1154
      ||||||  |||||
seq2  GAGGTCCAAGGCC  1157


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