BAC Information

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BAC

Clone NameB6Ng01-314E20
Chromosome7 (Build37)
Map Location 104,491,248 - 104,492,349
singlet/doubletsinglet
Overlap geneEG622320
Upstream geneOdz4, LOC666858, Nars2, Gab2, LOC100040457, Usp35
Downstream geneAlg8, Ndufc2, Thrsp, Kctd14, Ints4, 1810020D17Rik, Rsf1, LOC622994, LOC100040211, Clns1a, Aqp11, LOC100040594, Pak1, Gdpd4, Myo7a, Capn5, Omp, B3gnt6, Phca
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314E20.bB6Ng01-314E20.g
ACCGA105274GA105275
length1,1681,084
definitionB6Ng01-314E20.b B6Ng01-314E20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtttgatatgggaaggatgttgtaaccataatcgagatggaaa
aattgtaggaaaatgagtccaatggatattagaaggttagattttagagg
taaaaaggagtttagacagtgtcttgtctgtattcctggctggcctggaa
ctcactgtgtagcccaggctggcctcaaactgtcaagactcctgtcttag
tcatgtgctgagattacaggtgtgagttactctgcctggctgaaagttag
attttttaacattcttgttttgaaatgcttaatgatgaagagttggatat
aggactcgggttcagcagatggagctaagctgggggttgactttcaggag
ttgaagcaattagatggcttttgatccaatggtggatatagaaacagact
atctgagaactgagcattagagcaatctagagcttagagaaaaaggagaa
ggaaagaccagcactggcatcagaaaagcaataccaagtgagaaaatgag
agtggatgctaaagcccagtgaagaaagtgtgccactgaaggtagaataa
tagacctttgtaaactgttcctgatcacagaaagctccaagggttagtta
gcagtactgcagtcttcaagacttttgatacattgtatcggaggtacagt
gggaagcagattgatgaaggtgccttcatataagagtagaggaaacaaat
aagcatagttccataggtagtgcttgaagcttaactgaagagttggaaag
ctgagccaatagtcagaaatgaatgtggaatcaagacacccttttacttt
tttctgaaatggtagaaatgattctaagcagggaaagggtgaagcaacta
ctctgaagagggggcagttgttgaagcagtgttccagaaagatgaaagga
tgtgtgcctagggaagaaagctgatataaattattaggaaagctgtattc
tccagtcaccagagaatgtgactgtgaagatggctgcattggtaactgtg
gcatcagacccttttgattgatttcctcatgaatgagaacgagtagtttt
ggagatttaaggaaagaaaatcagaagattgtgccaaagagtacagtagg
tttcttttacgaggactagtagatagtcggcatggtcagtggtcccattg
tgtgaaagagccctacag
gaattccaggtatcattcccatggggttgaagctgtttaggccaaagatg
aaaggacacaccctgtgtgaggagaagctgtctcagcaggcagccttcca
cgcatctcttttccctgtctataagaagccatttcatctgccgaagctcc
cgggatagcctttaccatctcagagtttcagcccttgaataaaccctgac
ttccttctcaccacgaccttgtctcacagtattggcttctgagaggtgaa
cacgctcagtcttggaatagaagcaacacaagcaccagacatgatggtgt
atgcctgcaatcccagcagctcggaagtggaagattactctttgacacca
gctgttctatggcaagttcctctgggataaacaatccatctggaaggaag
gtctagactggagggaagctcactaagaggcaggatgttaaaactgaggt
gagcacaaggatgttctaaggagaggtgaaatgctctatcctgcagggaa
gcttgcaaggcccccaaaataaataattccaaagctccaggatgtccctc
aaactgagtctgtttactaggcctctccctcttcaaggatacataaacaa
ggatgcagagccatcctctcagacaagccaagctgcctaaagaaggctcc
aatcccacgggccagcagcctgagataatttccagccctccaagctgctg
acagttgtgcagtgggcttctgctttttgtgagctgtcacacagggctct
gggtaatacagatgtctttgagtcatttctgctcctgtaagttactccaa
taaaactcactggtttacctcattggactacggtggtttcctatctaaac
tgagtagacatttattcacattttcccagaaaaaagtgtcacacaacacc
agcctacgctgggttctaggccagtcttggctttatagactcttgtctca
atctccgtcacaacaaatcaacccaaacaaagaaatagtacacacaaaga
catagcagcactactggtagagcatgattaaaccacaataccactgtacg
tctacaaaattaagtgctcagtctaatgctggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_104491248_104492349
seq2: B6Ng01-314E20.g_63_1146 (reverse)

seq1  CACCAGCATTTAGAATTGAGCACTTTTATTTTTGTAGACGTACAGTGGTA  50
      |||||||| |||| | |||||||  ||| |||||||||||||||||||||
seq2  CACCAGCA-TTAG-ACTGAGCAC--TTAATTTTGTAGACGTACAGTGGTA  46

seq1  TTTGTGGTTTTAATTCCATGCCTCTAACAGGTAGTGCTGCTTAATTGTTC  100
       |||||| ||||||  |||| ||||| || |||||||||||  ||   ||
seq2  -TTGTGG-TTTAAT--CATG-CTCTACCA-GTAGTGCTGCT--AT--GTC  86

seq1  TTTGTGTTGTTACTATTTCTTTGGTTTGGGTTTGATTTG-TGTGACGGGA  149
      |||||||   |||||||||||| ||||||| |||||||| |||||| |||
seq2  TTTGTGT--GTACTATTTCTTT-GTTTGGG-TTGATTTGTTGTGAC-GGA  131

seq1  GATTGAGACAAGAGTCTTATAAAGCCAAGACTGGCCTAGAA-CCAGCCTA  198
      |||||||||||||||| |||||||||||||||||||||||| ||||| ||
seq2  GATTGAGACAAGAGTC-TATAAAGCCAAGACTGGCCTAGAACCCAGCGTA  180

seq1  GGCTGGTGTTGTGTGACACTTTTTTCTGGGAAAATGTGAATAAATGTCTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTGTTGTGTGACACTTTTTTCTGGGAAAATGTGAATAAATGTCTA  230

seq1  CTCAGTTTAGATAGGAAACCACCGTAGTCCAATGAGGTAAACCAGTGAGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTTAGATAGGAAACCACCGTAGTCCAATGAGGTAAACCAGTGAGT  280

seq1  TTTATTGGAGTAACTTACAGGAGCAGAAATGACTCAAAGACATCTGTATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGGAGTAACTTACAGGAGCAGAAATGACTCAAAGACATCTGTATT  330

seq1  ACCCAGAGCCCTGTGTGACAGCTCACAAAAAGCAGAAGCCCACTGCACAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAGCCCTGTGTGACAGCTCACAAAAAGCAGAAGCCCACTGCACAA  380

seq1  CTGTCAGCAGCTTGGAGGGCTGGAAATTATCTCAGGCTGCTGGCCCGTGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGCAGCTTGGAGGGCTGGAAATTATCTCAGGCTGCTGGCCCGTGG  430

seq1  GATTGGAGCCTTCTTTAGGCAGCTTGGCTTGTCTGAGAGGATGGCTCTGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGAGCCTTCTTTAGGCAGCTTGGCTTGTCTGAGAGGATGGCTCTGC  480

seq1  ATCCTTGTTTATGTATCCTTGAAGAGGGAGAGGCCTAGTAAACAGACTCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGTTTATGTATCCTTGAAGAGGGAGAGGCCTAGTAAACAGACTCA  530

seq1  GTTTGAGGGACATCCTGGAGCTTTGGAATTATTTATTTTGGGGGCCTTGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGGGACATCCTGGAGCTTTGGAATTATTTATTTTGGGGGCCTTGC  580

seq1  AAGCTTCCCTGCAGGATAGAGCATTTCACCTCTCCTTAGAACATCCTTGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCCCTGCAGGATAGAGCATTTCACCTCTCCTTAGAACATCCTTGT  630

seq1  GCTCACCTCAGTTTTAACATCCTGCCTCTTAGTGAGCTTCCCTCCAGTCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACCTCAGTTTTAACATCCTGCCTCTTAGTGAGCTTCCCTCCAGTCT  680

seq1  AGACCTTCCTTCCAGATGGATTGTTTATCCCAGAGGAACTTGCCATAGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTCCTTCCAGATGGATTGTTTATCCCAGAGGAACTTGCCATAGAA  730

seq1  CAGCTGGTGTCAAAGAGTAATCTTCCACTTCCGAGCTGCTGGGATTGCAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGTGTCAAAGAGTAATCTTCCACTTCCGAGCTGCTGGGATTGCAG  780

seq1  GCATACACCATCATGTCTGGTGCTTGTGTTGCTTCTATTCCAAGACTGAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACACCATCATGTCTGGTGCTTGTGTTGCTTCTATTCCAAGACTGAG  830

seq1  CGTGTTCACCTCTCAGAAGCCAATACTGTGAGACAAGGTCGTGGTGAGAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTTCACCTCTCAGAAGCCAATACTGTGAGACAAGGTCGTGGTGAGAA  880

seq1  GGAAGTCAGGGTTTATTCAAGGGCTGAAACTCTGAGATGGTAAAGGCTAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCAGGGTTTATTCAAGGGCTGAAACTCTGAGATGGTAAAGGCTAT  930

seq1  CCCGGGAGCTTCGGCAGATGAAATGGCTTCTTATAGACAGGGAAAAGAGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGGAGCTTCGGCAGATGAAATGGCTTCTTATAGACAGGGAAAAGAGA  980

seq1  TGCGTGGAAGGCTGCCTGCTGAGACAGCTTCTCCTCACACAGGGTGTGTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTGGAAGGCTGCCTGCTGAGACAGCTTCTCCTCACACAGGGTGTGTC  1030

seq1  CTTTCATCTTTGGCCTAAACAGCTTCAACCCCATGGGAATGATACCTGGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATCTTTGGCCTAAACAGCTTCAACCCCATGGGAATGATACCTGGA  1080

seq1  ATTC  1102
      ||||
seq2  ATTC  1084