BAC Information

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BAC

Clone NameB6Ng01-314J24
Chromosome7 (Build37)
Map Location 150,115,366 - 150,300,735
singlet/doubletdoublet
Overlap geneAscl2, Tspan32, R74862, Cd81, Tssc4, Trpm5, Kcnq1
Upstream geneEG623757, Brsk2, 2700078K21Rik, Dusp8, LOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as, Ins2, EG640264, EG624121, Th
Downstream geneCdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314J24.bB6Ng01-314J24.g
ACCGA105501GA105502
length940948
definitionB6Ng01-314J24.b B6Ng01-314J24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,299,941 - 150,300,735)(150,115,366 - 150,116,306)
sequence
gaattccaaacatagtaagagagaagtgccaagttacataaaagggaatc
ttcagtatactaacagtgagaagccttttaagccaggaaagaataggatg
ataccaccagagttttaaaaggaaatgaatgaatgaatgaatacccatca
accaggaatatgatacccagcaaaactatcctacagaaaaaaaaaagtct
ttctaaagcaagcaaaactaaaagaactcatcaatagattagtcctataa
gaaaggcttcaagtagtgctcagaaaaaacaaatattgtctctggtcttt
tcctagctcaaactgtaagccaaaataaattctttcttaaattgcttctg
tcagggattatatcattgcagtgataaaaataactaacacggagactgaa
agttcagggatgggaaacacaactcaggcaaatgaaagcaaaagcaagca
gtaggcacacttacatcaggaaagtcaactgtcagtcaaagactaaatag
agacagggaagcctggccaagggatggagtcaacaggtgaattcctgcac
ccattagatctcaaaggagaaacattatctaacagaatgacagttaagga
caaactgtatcaatggacaagtagtccaggaaaatgtcagtgcaaaaatg
ctggagttaaaatacactatagactaaaaggatctacaagttgttcacaa
aataccttctcaccagcacagggaatggcctacagtatagaccacatggg
agaccacaaagtctcacacacacacacacacacacacacacacacacaca
cacacacacagagagagagagagagagagagagagagagagagttagaac
tgggtcatttgaagttaacaaagatgtacgaacaaaatgcatgttaaaac
ttcatagagctccatatctgaccactaacttgctagggac
gaattctgggaggagatgcttggaagtaataagatggtgttccaacccag
agcgtacaggcatccataagcctggtggagctatttcccaagtccattga
ggctccaccatttcccaagcacccctgtggtggcctagttctgccagcag
ggccttcccttcaggaagctggttgctaagcagaaactagggtcacccca
cctctacctaccaaggatgctgagggcattggctcacactccagaaataa
cccatcccgggatgccccgtgggtgacatgaaggctgccagtggctgcat
gtctctgcttgcccatagattgtggcagcagggccccttctgacctcatc
tcttcccagtggaggtcagcagttgcccacagagaagtaagaagtacaga
gagtagtgaaaagaggatggggagaccacctggaagttataagcagcctg
aggcagggtcaaggccagaagagtagccagagaggcgaagggacagcagg
gcttagagacctgaaggaatgaggacaggctggagagaaagtaatagagc
gttaccagggcacagaagtggctgggataaggacagggtatgctaaaaca
aggtaggagcagaggtttcgtggatgggcccaagtacaaagctttactgg
gttccagagggaggacagcaggcaaggctgggcatttgagctggggcaca
gatggctatgggacagagaaaggactagcagacctggagcagctgctgga
gcaccaagattctcctgccaaagcaaagacagaagtgagagccagacccc
attcaggaaataaggtgatggggggaccctttggccccaagcacaagcct
tcactacatagctcttgtagcttgtgaggtctaaggcctggccatggcct
tggtgtggagtgtgcttcttaaccatgcaagggcgggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_150299941_150300735
seq2: B6Ng01-314J24.b_47_841 (reverse)

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGACTTTGTGGTCTCCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGACTTTGTGGTCTCCCAT  50

seq1  GTGGTCTATACTGTAGGCCATTCCCTGTGCTGGTGAGAAGGTATTTTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTATACTGTAGGCCATTCCCTGTGCTGGTGAGAAGGTATTTTGTG  100

seq1  AACAACTTGTAGATCCTTTTAGTCTATAGTGTATTTTAACTCCAGCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTTGTAGATCCTTTTAGTCTATAGTGTATTTTAACTCCAGCATTT  150

seq1  TTGCACTGACATTTTCCTGGACTACTTGTCCATTGATACAGTTTGTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTGACATTTTCCTGGACTACTTGTCCATTGATACAGTTTGTCCTT  200

seq1  AACTGTCATTCTGTTAGATAATGTTTCTCCTTTGAGATCTAATGGGTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCATTCTGTTAGATAATGTTTCTCCTTTGAGATCTAATGGGTGCA  250

seq1  GGAATTCACCTGTTGACTCCATCCCTTGGCCAGGCTTCCCTGTCTCTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCACCTGTTGACTCCATCCCTTGGCCAGGCTTCCCTGTCTCTATT  300

seq1  TAGTCTTTGACTGACAGTTGACTTTCCTGATGTAAGTGTGCCTACTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTTGACTGACAGTTGACTTTCCTGATGTAAGTGTGCCTACTGCTT  350

seq1  GCTTTTGCTTTCATTTGCCTGAGTTGTGTTTCCCATCCCTGAACTTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGCTTTCATTTGCCTGAGTTGTGTTTCCCATCCCTGAACTTTCAG  400

seq1  TCTCCGTGTTAGTTATTTTTATCACTGCAATGATATAATCCCTGACAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCGTGTTAGTTATTTTTATCACTGCAATGATATAATCCCTGACAGAA  450

seq1  GCAATTTAAGAAAGAATTTATTTTGGCTTACAGTTTGAGCTAGGAAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTAAGAAAGAATTTATTTTGGCTTACAGTTTGAGCTAGGAAAAGA  500

seq1  CCAGAGACAATATTTGTTTTTTCTGAGCACTACTTGAAGCCTTTCTTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGACAATATTTGTTTTTTCTGAGCACTACTTGAAGCCTTTCTTATA  550

seq1  GGACTAATCTATTGATGAGTTCTTTTAGTTTTGCTTGCTTTAGAAAGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAATCTATTGATGAGTTCTTTTAGTTTTGCTTGCTTTAGAAAGACT  600

seq1  TTTTTTTTTCTGTAGGATAGTTTTGCTGGGTATCATATTCCTGGTTGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCTGTAGGATAGTTTTGCTGGGTATCATATTCCTGGTTGATG  650

seq1  GGTATTCATTCATTCATTCATTTCCTTTTAAAACTCTGGTGGTATCATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTCATTCATTCATTCATTTCCTTTTAAAACTCTGGTGGTATCATCC  700

seq1  TATTCTTTCCTGGCTTAAAAGGCTTCTCACTGTTAGTATACTGAAGATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTCCTGGCTTAAAAGGCTTCTCACTGTTAGTATACTGAAGATTC  750

seq1  CCTTTTATGTAACTTGGCACTTCTCTCTTACTATGTTTGGAATTC  795
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTATGTAACTTGGCACTTCTCTCTTACTATGTTTGGAATTC  795

seq1: chr7_150115366_150116306
seq2: B6Ng01-314J24.g_70_1016

seq1  GAATTCTGGGAGGAGATGCTTGGAAGTAATAAGATGGTGTTCCAACCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGAGGAGATGCTTGGAAGTAATAAGATGGTGTTCCAACCCAG  50

seq1  AGCGTACAGGCATCCATAAGCCTGGTGGAGCTATTTCCCAAGTCCATTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTACAGGCATCCATAAGCCTGGTGGAGCTATTTCCCAAGTCCATTGA  100

seq1  GGCTCCACCATTTCCCAAGCACCCCTGTGGTGGCCTAGTTCTGCCAGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCACCATTTCCCAAGCACCCCTGTGGTGGCCTAGTTCTGCCAGCAG  150

seq1  GGCCTTCCCTTCAGGAAGCTGGTTGCTAAGCAGAAACTAGGGTCACCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCCCTTCAGGAAGCTGGTTGCTAAGCAGAAACTAGGGTCACCCCA  200

seq1  CCTCTACCTACCAAGGATGCTGAGGGCATTGGCTCACACTCCAGAAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACCTACCAAGGATGCTGAGGGCATTGGCTCACACTCCAGAAATAA  250

seq1  CCCATCCCGGGATGCCCCGTGGGTGACATGAAGGCTGCCAGTGGCTGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCCGGGATGCCCCGTGGGTGACATGAAGGCTGCCAGTGGCTGCAT  300

seq1  GTCTCTGCTTGCCCATAGATTGTGGCAGCAGGGCCCCTTCTGACCTCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGCTTGCCCATAGATTGTGGCAGCAGGGCCCCTTCTGACCTCATC  350

seq1  TCTTCCCAGTGGAGGTCAGCAGTTGCCCACAGAGAAGTAAGAAGTACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCAGTGGAGGTCAGCAGTTGCCCACAGAGAAGTAAGAAGTACAGA  400

seq1  GAGTAGTGAAAAGAGGATGGGGAGACCACCTGGAAGTTATAAGCAGCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGTGAAAAGAGGATGGGGAGACCACCTGGAAGTTATAAGCAGCCTG  450

seq1  AGGCAGGGTCAAGGCCAGAAGAGTAGCCAGAGAGGCGAAGGGACAGCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGGTCAAGGCCAGAAGAGTAGCCAGAGAGGCGAAGGGACAGCAGG  500

seq1  GCTTAGAGACCTGAAGGAATGAGGACAGGCTGGAGAGAAAGTAATAGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGAGACCTGAAGGAATGAGGACAGGCTGGAGAGAAAGTAATAGAGC  550

seq1  GTTACCAGGGCACAGAAGTGGCTGGGATAAGGACAGGGTATGCTAAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCAGGGCACAGAAGTGGCTGGGATAAGGACAGGGTATGCTAAAACA  600

seq1  AGGTAGGAGCAGAGGTTTCGTGGATGGGCCCAAGTACAAAGCTTTACTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGAGCAGAGGTTTCGTGGATGGGCCCAAGTACAAAGCTTTACTGG  650

seq1  GTTCCAGAGGGAGGACAGCAGGCAAGGCTGGGCATTTGAGCTGGGGCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGAGGGAGGACAGCAGGCAAGGCTGGGCATTTGAGCTGGGGCACA  700

seq1  GATGGCTATGGGACAGAG-AAGGACTAGCAGACCTGGAGCAGCTGCTGGA  749
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GATGGCTATGGGACAGAGAAAGGACTAGCAGACCTGGAGCAGCTGCTGGA  750

seq1  GCACCAAGATTCTCCTGCCAAAGCAAAGACAGAAGTGAGAGCCAGACCCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAAGATTCTCCTGCCAAAGCAAAGACAGAAGTGAGAGCCAGACCCC  800

seq1  ATTCAGGAAATAAGGTGAT-GGGGGACCCTTTGGCCCCAAGCACAAGCCC  848
      ||||||||||||||||||| ||||||||||||||||||||||||||| ||
seq2  ATTCAGGAAATAAGGTGATGGGGGGACCCTTTGGCCCCAAGCACAAG-CC  849

seq1  TTCACTACATAGCTCTTGTAGCTTGTGAGGTCTAAGGCCTGGCCATGG-C  897
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTCACTACATAGCTCTTGTAGCTTGTGAGGTCTAAGGCCTGGCCATGGCC  899

seq1  TTGGTGT-GAGTGTGC-TCTT-ACCATGCAA-GGCGGGGGGGGGGGGG  941
      ||||||| |||||||| |||| ||||||||| ||||||||||||||||
seq2  TTGGTGTGGAGTGTGCTTCTTAACCATGCAAGGGCGGGGGGGGGGGGG  947