BAC Information

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BAC

Clone NameB6Ng01-315G18
Chromosome7 (Build37)
Map Location 150,289,585 - 150,290,156
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as, Ins2, EG640264, EG624121, Th, Ascl2, Tspan32, R74862, Cd81, Tssc4, Trpm5
Downstream geneKcnq1, Cdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315G18.bB6Ng01-315G18.g
ACCGA106076GA106077
length1,183567
definitionB6Ng01-315G18.b B6Ng01-315G18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggatacaatgagtagacaaaacctagggataataggagtaga
ggagaatgaagattttcaacttaaagggtcagcaaatatcttcaacaaaa
ttatagaagaaaacttcccaaacctaaagtaagagatgcccatgaacata
caagaaccctacaaaactccaaatagactggaccagaaaagaaattcctc
ccaacacataataatcagaacaacaaatgcactaaatatagaatattaaa
agtagtaagggaaaaaggtcaagtgacatataaaggcaggcctattagaa
ttacatcagacttctcaccagagactatgaaagccagaaatcctggacag
atgttatacagatcctaagaaaacacaaatgccagcccaggctgctatac
ccagcaaaattctcaattaccatagatggaaaaaccaaaatattccatga
taagaccaaattcacacaatgtctttcctcatatccagcccttcaaagga
taataaagggaaaacaacaacacaagtacagaaaccacaccctagaaaaa
gcaagaaagtaatccttcaacaaacctaatagaagatagccacaagaaca
gaatcccaagtttaacaacaaaaataacaagaagcaacaattacttttct
ttaatttctcttaacatcaatagactcaattccccaataaaaagacatag
actaatagactggctacacaaacaggacacaacattttgctgctgacagg
aaacccacctcagggacaaagacagacactacctcagagtgaaaggctgg
aaaacaattttccaagcaaatggtcagaagaaacaagctggagtagtcat
tttaatatcgaacaaaactactttccaacccaagttatcaaaaaagacaa
ggagggcacatcatactcatcaaaggcaaaatctaccaagatgaactctc
attctgatatgctccaaatacaagacatccacattaatttaagaacttta
gtaagcccttaagcacatattgcacctcacacaataatagtgggagacgt
taacaccccactttgcacaatggaacggattctgtaacagaaactaatta
gagaacacattgacacttaacagatttatgaccatggatttatagatttc
tacggaacattttatcctaataaaaaggaattc
tgctcttgctcagacttttccaagtgtgtgtgtttggggggtggagttta
cacaagcatgggtatatatttgtatgtggtggagtatgtgtggtgcacaa
gggtgtgtgtctgtgtgtacatgtgtgtgaaaaccagaagacaaattttt
ggtgttgttcctcggtggcagtccatcttgatttttgagacaaggtctct
ctacatctctgactgtcctggaactcactgtgtagaagaggctgaccttg
cactcacagagatccacctgcctctgtctcccaagtgctgggattaaagg
cacgggctactatgcctggtatatgtcccacatttttatgtgggttctgg
gactgaactcagtcttcatgcttgtccaagcaagcaattcaccaaccagg
ccatcctcaccctgatctttccaaagtttttagtcggatatagctgtaaa
gtaatcttgaaaggaaactacagaggagattatggtaatattttaaactc
acattaaaagatttgtttttacttctttgattttacatctgtatctttta
tatcttggttcctaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_150289585_150290156
seq2: B6Ng01-315G18.g_66_638

seq1  GAATTCTGCTCTTGCTCAGACTTTTCCAAGTGTGTGTGTTTGGGGGGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTCTTGCTCAGACTTTTCCAAGTGTGTGTGTTTGGGGGGTGG  50

seq1  AGTTTACACAAGCATGGGTATATATTTGTATGTGGTGGAGTATGTGTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTACACAAGCATGGGTATATATTTGTATGTGGTGGAGTATGTGTGGT  100

seq1  GCACAAGGGTGTGTGTCTGTGTGTACATGTGTGTGAAAACCAGAAGACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAGGGTGTGTGTCTGTGTGTACATGTGTGTGAAAACCAGAAGACAA  150

seq1  ATTTTTGGTGTTGTTCCTCGGTGGCAGTCCATCTTGATTTTTGAGACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGGTGTTGTTCCTCGGTGGCAGTCCATCTTGATTTTTGAGACAAG  200

seq1  GTCTCTCTACATCTCTGACTGTCCTGGAACTCACTGTGTAGAAGAGGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCTACATCTCTGACTGTCCTGGAACTCACTGTGTAGAAGAGGCTG  250

seq1  ACCTTGCACTCACAGAGATCCACCTGCCTCTGTCTCCCAAGTGCTGGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGCACTCACAGAGATCCACCTGCCTCTGTCTCCCAAGTGCTGGGAT  300

seq1  TAAAGGCACGGGCTACTATGCCTGGTATATGTCCCACATTTTTATGTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCACGGGCTACTATGCCTGGTATATGTCCCACATTTTTATGTGGG  350

seq1  TTCTGGGACTGAACTCAGTCTTCATGCTTGTCCAAGCAAGCAATTCACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGACTGAACTCAGTCTTCATGCTTGTCCAAGCAAGCAATTCACCA  400

seq1  ACCAGGCCATCCTCACCCTGATCTTTCCAAAGTTTTTAGTCGGATATAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCCATCCTCACCCTGATCTTTCCAAAGTTTTTAGTCGGATATAGC  450

seq1  TGTAAAGTAATCTTGAAAGGAAACAACAGAGGAGATTATGGTAATATTTT  500
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGTAAAGTAATCTTGAAAGGAAACTACAGAGGAGATTATGGTAATATTTT  500

seq1  AAACTCACATT-AAAGATTTGTTTTTACTTCTTTGATTTTACATCTGTAT  549
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAACTCACATTAAAAGATTTGTTTTTACTTCTTTGATTTTACATCTGTAT  550

seq1  CTTTTATATCTTGGTTCCTAAGA  572
      |||||||||||||||||||||||
seq2  CTTTTATATCTTGGTTCCTAAGA  573