BAC Information

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BAC

Clone NameB6Ng01-315K08
Chromosome7 (Build37)
Map Location 120,842,978 - 120,960,288
singlet/doubletdoublet
Overlap geneEG434228, Spon1
Upstream geneTead1, 4632411J06Rik, LOC434227, Arntl, A630005I04Rik, Btbd10, Pth, LOC100042736, Mlstd2
Downstream geneRras2, LOC668451, Copb1, Psma1, 4933406I18Rik, Pde3b, Cyp2r1, Calca, LOC100043295, Calcb, Insc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315K08.bB6Ng01-315K08.g
ACCGA106235GA106236
length1,2011,129
definitionB6Ng01-315K08.b B6Ng01-315K08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,959,108 - 120,960,288)(120,842,978 - 120,844,112)
sequence
ggaattcatccagatcaaaggtatgtgagcgccctttctgtaaggaaggg
taaggcagtgcatggaggctactgtgtgcctgtgttggctaaacagcttc
atgaggaggaatcagaccataagttgccaggggccagggccatgtttatc
ttattcttctgttccccgtgtccagatcactggtcacatttgctggttga
atgtgcctatctccctgaaaatcaactgcttcacactgttgcttccaaca
ttgttccaccaccctctgcctggcttatccagtgacttgtctgctctaga
ctcagtttcctaagatgaggagttgggtaagacaccctccagaaaagtcc
ttgctgccttagccagagcagactgctttgacatactcagaatgctactt
tgtgagtatgtgtatgtgagcacatgcgtttggatgtttattcatgaaga
ggccagaaagaaacctttaggtgtctggctgtcatcctcatgcaccatac
agtttcttttctattgtttctgaggcagtggaacttgccccataggctaa
gctgactggctagctgactggtctgtttattaccaccttcccagggctgg
aattacatgtctttgacacactctgcttgtcttttaagcatgggctctag
ggatccaagtgaggcctcgtgttttcaggcaagcactccactgactgagg
attctccccagcctcccatcttaacactcaagcccagtttctaagccagc
actttccacacacaactattctctcaagttttgtcagaacacacctggct
ggttctttccagtcttttttgccttcctccctcaatccttgtctctcttg
gcagcctcctttcattgggcaggtctccctaccaggcagcccggcagtct
gggagctaacctccaccttcgtgaacctttctcctaaagaacaaattcca
cagctgaagaaaatgtagcttcaccttaccatctccctaacctcagttct
gacgattggcatgtttgttgaaactgtggcacagagaggattgggttcct
cgtggtttgtaactgttctgctacacttccctgggtgtttcagtcacatg
gatcttagtaaggcctttaactttgaattcccagttcaagtttgtcctaa
ccagttttctcacccgtggacaccttaactccacaaaggcccagtgcagt
a
gaattccttctatgtcccccgccaagtgttgtgtgccaaagtagaatccc
aaatgagcaggacatggcttctgccaccaattcctaggccagtggaggag
gaagtagaaagaaatttgggtgacattttctgactctattaagaacaggc
ataatatctgatttctttccctgttatcccaataaatcctccaggccact
aggggtgttctagtgtcagatgagagttaaagatctgtgcccaggcctta
gagcgcccaagaagtaaacgcaggttaatatttgggcctacctgggtgtt
aatttttatttctgtgacaaaatacatgagatgagcaacataaaccgttt
ccctgggctagcggtgtcagggtgtcagaggttttaatgcagagtcagct
catgccattgctgtaggcccatggagaggcagcacggcacaccatgctgg
caggactgtgtcagggaacaaatagttcatgttgtagtgtccaggatgca
gaaagagaaaggggccagggcaagggatcccctcaaagatactttcccct
cccctctcccaaccccaatgagacctacccactttcaccaagcaggacca
tctcttaataacccatccggtattctctgatcagtggattaacacatgga
ctaagtcaggagcctactgatccagtcacctctcaataatggagtctacc
agcttgggaggaggtatgctttcaacatctgagcctagtaggggattctt
cctaaattaactgtacgtttaactcagaaaccacactggttctcatgtaa
agggattttctgtaggcttacatacaaatgattacttcatctatcaaaga
gatgtcattatcagcttttaggtccaaatccaatgacttcatcctaaaag
gcagagattgtggttaccgtaaggaagacgatgggagtagggctgtgggt
ggaccactggtgggaagatgcagcatttctgtgaccaacccagtccctct
ctcacagcctgtgatcttcccctgacaatccatctttttccccacccctc
cttctctgctacatacatttaatgttgtcaggaaccttagctgtgggcag
gctaacatagttataataagcagactcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_120959108_120960288
seq2: B6Ng01-315K08.b_51_1250 (reverse)

seq1  TACTGCA-TGG--CTTTGTGGAGTTTAGGTGTCCCACGGGTGAGAAAAAC  47
      ||||||| |||  |||||||||||| |||||| ||||||||||| |||||
seq2  TACTGCACTGGGCCTTTGTGGAGTTAAGGTGT-CCACGGGTGAG-AAAAC  48

seq1  TGTGTA-GACAAACTTG-ACTGGGGA-TCCAAGTT-AAGGCTTAACTAAG  93
      ||  || |||||||||| |||||| | || ||||| ||||| | ||||||
seq2  TGGTTAGGACAAACTTGAACTGGGAATTCAAAGTTAAAGGCCTTACTAAG  98

seq1  AT-CATGTGACTGAAACA-CCAGG--AGTGTAGCAG-ACAGTTAACAAAC  138
      || ||||||||||||||| |||||  |||||||||| |||||||  || |
seq2  ATCCATGTGACTGAAACACCCAGGGAAGTGTAGCAGAACAGTTACAAACC  148

seq1  ACGA-GAACCC-ATCCTCTCTTGTGCCACAGTTTCAAC-AACATGCCAAT  185
      |||| |||||| |||||||| ||||||||||||||||| |||||||||||
seq2  ACGAGGAACCCAATCCTCTC-TGTGCCACAGTTTCAACAAACATGCCAAT  197

seq1  CCGTCAGAACTGAGGTTAGGGAGATGGTAA-GTG-AGCTACATTTTC-TC  232
       ||||||||||||||||||||||||||||| ||| |||||||||||| ||
seq2  -CGTCAGAACTGAGGTTAGGGAGATGGTAAGGTGAAGCTACATTTTCTTC  246

seq1  AGCTGTGG-ATTTGTTC-TTAGGAGAAAGGTTCACG-AGGTGGAGGTTAG  279
      |||||||| |||||||| |||||||||||||||||| |||||||||||||
seq2  AGCTGTGGAATTTGTTCTTTAGGAGAAAGGTTCACGAAGGTGGAGGTTAG  296

seq1  CTCCCAGACTGCC-GGCTGCCTGGTAGGGAGACCTG-CCAATGAAGGGAG  327
      ||||||||||||| |||||||||||||||||||||| |||||||| ||||
seq2  CTCCCAGACTGCCGGGCTGCCTGGTAGGGAGACCTGCCCAATGAAAGGAG  346

seq1  GCTGCCAAGAGAGACAAGGATTGAGGGAGGAAGGCAAAAAAGACTGGAAA  377
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCAAGAGAGACAAGGATTGAGGGAGGAAGGCAAAAAAGACTGGAAA  396

seq1  GAACCAGCCAGGTGTGTTCTGACAAAACTTGAGAGAATAGTTGTGTGTGG  427
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAGCCAGGTGTGTTCTGACAAAACTTGAGAGAATAGTTGTGTGTGG  446

seq1  AAAGTGCTGGCTTAGAAACTGGGCTTGAGTGTTAAGATGGGAGGCTGGGG  477
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCTGGCTTAGAAACTGGGCTTGAGTGTTAAGATGGGAGGCTGGGG  496

seq1  AGAATCCTCAGTCAGTGGAGTGCTTGCCTGAAAACACGAGGCCTCACTTG  527
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCTCAGTCAGTGGAGTGCTTGCCTGAAAACACGAGGCCTCACTTG  546

seq1  GATCCCTAGAGCCCATGCTTAAAAGACAAGCAGAGTGTGTCAAAGACATG  577
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCTAGAGCCCATGCTTAAAAGACAAGCAGAGTGTGTCAAAGACATG  596

seq1  TAATTCCAGCCCTGGGAAGGTGGTAATAAACAGACCAGTCAGCTAGCCAG  627
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCAGCCCTGGGAAGGTGGTAATAAACAGACCAGTCAGCTAGCCAG  646

seq1  TCAGCTTAGCCTATGGGGCAAGTTCCACTGCCTCAGAAACAATAGAAAAG  677
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTAGCCTATGGGGCAAGTTCCACTGCCTCAGAAACAATAGAAAAG  696

seq1  AAACTGTATGGTGCATGAGGATGACAGCCAGACACCTAAAGGTTTCTTTC  727
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTATGGTGCATGAGGATGACAGCCAGACACCTAAAGGTTTCTTTC  746

seq1  TGGCCTCTTCATGAATAAACATCCAAACGCATGTGCTCACATACACATAC  777
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCTTCATGAATAAACATCCAAACGCATGTGCTCACATACACATAC  796

seq1  TCACAAAGTAGCATTCTGAGTATGTCAAAGCAGTCTGCTCTGGCTAAGGC  827
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAGTAGCATTCTGAGTATGTCAAAGCAGTCTGCTCTGGCTAAGGC  846

seq1  AGCAAGGACTTTTCTGGAGGGTGTCTTACCCAACTCCTCATCTTAGGAAA  877
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGACTTTTCTGGAGGGTGTCTTACCCAACTCCTCATCTTAGGAAA  896

seq1  CTGAGTCTAGAGCAGACAAGTCACTGGATAAGCCAGGCAGAGGGTGGTGG  927
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCTAGAGCAGACAAGTCACTGGATAAGCCAGGCAGAGGGTGGTGG  946

seq1  AACAATGTTGGAAGCAACAGTGTGAAGCAGTTGATTTTCAGGGAGATAGG  977
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGTTGGAAGCAACAGTGTGAAGCAGTTGATTTTCAGGGAGATAGG  996

seq1  CACATTCAACCAGCAAATGTGACCAGTGATCTGGACACGGGGAACAGAAG  1027
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCAACCAGCAAATGTGACCAGTGATCTGGACACGGGGAACAGAAG  1046

seq1  AATAAGATAAACATGGCCCTGGCCCCTGGCAACTTATGGTCTGATTCCTC  1077
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGATAAACATGGCCCTGGCCCCTGGCAACTTATGGTCTGATTCCTC  1096

seq1  CTCATGAAGCTGTTTAGCCAACACAGGCACACAGTAGCCTCCATGCACTG  1127
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAAGCTGTTTAGCCAACACAGGCACACAGTAGCCTCCATGCACTG  1146

seq1  CCTTACCCTTCCTTACAGAAAGGGCGCTCACATACCTTTGATCTGGATGA  1177
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACCCTTCCTTACAGAAAGGGCGCTCACATACCTTTGATCTGGATGA  1196

seq1  ATTC  1181
      ||||
seq2  ATTC  1200

seq1: chr7_120842978_120844112
seq2: B6Ng01-315K08.g_69_1197

seq1  GAATTCCTTCTATGTCCCCCGCCAAGTGTTGTGTGCCAAAGTAGAATCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTATGTCCCCCGCCAAGTGTTGTGTGCCAAAGTAGAATCCC  50

seq1  AAATGAGCAGGACATGGCTTCTGCCACCAATTCCTAGGCCAGTGGAGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGCAGGACATGGCTTCTGCCACCAATTCCTAGGCCAGTGGAGGAG  100

seq1  GAAGTAGAAAGAAATTTGGGTGACATTTTCTGACTCTATTAAGAACAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGAAAGAAATTTGGGTGACATTTTCTGACTCTATTAAGAACAGGC  150

seq1  ATAATATCTGATTTCTTTCCCTGTTATCCCAATAAATCCTCCAGGCCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATCTGATTTCTTTCCCTGTTATCCCAATAAATCCTCCAGGCCACT  200

seq1  AGGGGTGTTCTAGTGTCAGATGAGAGTTAAAGATCTGTGCCCAGGCCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGTTCTAGTGTCAGATGAGAGTTAAAGATCTGTGCCCAGGCCTTA  250

seq1  GAGCGCCCAAGAAGTAAACGCAGGTTAATATTTGGGCCTACCTGGGTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGCCCAAGAAGTAAACGCAGGTTAATATTTGGGCCTACCTGGGTGTT  300

seq1  AATTTTTATTTCTGTGACAAAATACATGAGATGAGCAACATAAACCGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTATTTCTGTGACAAAATACATGAGATGAGCAACATAAACCGTTT  350

seq1  CCCTGGGCTAGCGGTGTCAGGGTGTCAGAGGTTTTAATGCAGAGTCAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGCTAGCGGTGTCAGGGTGTCAGAGGTTTTAATGCAGAGTCAGCT  400

seq1  CATGCCATTGCTGTAGGCCCATGGAGAGGCAGCACGGCACACCATGCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCATTGCTGTAGGCCCATGGAGAGGCAGCACGGCACACCATGCTGG  450

seq1  CAGGACTGTGTCAGGGAACAAATAGTTCATGTTGTAGTGTCCAGGATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTGTGTCAGGGAACAAATAGTTCATGTTGTAGTGTCCAGGATGCA  500

seq1  GAAAGAGAAAGGGGCCAGGGCAAGGGATCCCCTCAAAGATACTTTCCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAAAGGGGCCAGGGCAAGGGATCCCCTCAAAGATACTTTCCCCT  550

seq1  CCCCTCTCCCAACCCCAATGAGACCTACCCACTTTCACCAAGCAGGACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTCCCAACCCCAATGAGACCTACCCACTTTCACCAAGCAGGACCA  600

seq1  TCTCTTAATAACCCATCCGGTATTCTCTGATCAGTGGATTAACACATGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTAATAACCCATCCGGTATTCTCTGATCAGTGGATTAACACATGGA  650

seq1  CTAAGTCAGGAGCCTACTGATCCAGTCACCTCTCAATAATGGAGTCTACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTCAGGAGCCTACTGATCCAGTCACCTCTCAATAATGGAGTCTACC  700

seq1  AGCTTGGGAGGAGGTATGCTTTCAACATCTGAGCCTAGTAGGGGATTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGGAGGAGGTATGCTTTCAACATCTGAGCCTAGTAGGGGATTCTT  750

seq1  CCTAAATTAACTGTACGTTTAACTCAGAAACCACACTGGTTCTCATGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATTAACTGTACGTTTAACTCAGAAACCACACTGGTTCTCATGTAA  800

seq1  AGGGATTTTCTGTAGGCTTACATACAAATGATTACTTCATCTATCAAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGGGATTTTCTGTAGGCTTACATACAAATGATTACTTCATCTATC-AAAG  849

seq1  AGATGTCATTATCAGCTTTTAGGTCCAAATCCAATGACTTCATCCTAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCATTATCAGCTTTTAGGTCCAAATCCAATGACTTCATCCTAAAA  899

seq1  GGCAGAGATTGTGGTTACCGTAAGGAAGACGAT-GGAGTAGGGCTGTGGG  949
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGCAGAGATTGTGGTTACCGTAAGGAAGACGATGGGAGTAGGGCTGTGGG  949

seq1  TGGACCACTGGTGGGAAGATGCAGCATTTCTGTGGACCAACCCAGTCCCT  999
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGGACCACTGGTGGGAAGATGCAGCATTTCTGT-GACCAACCCAGTCCCT  998

seq1  CTCTCACAGCCTGGTGATCTTCCCCTTGACAAATCCCATC-TTTTCCCCA  1048
      |||||||||||| |||||||||||| ||||||   ||||| |||||||||
seq2  CTCTCACAGCCT-GTGATCTTCCCC-TGACAA--TCCATCTTTTTCCCCA  1044

seq1  CCCCTC--TCTCTGCTTAACCATACATTTTATGTTGTCA-GAACTTTTAA  1095
      ||||||  ||||||||    ||||||||| ||||||||| |||| ||  |
seq2  CCCCTCCTTCTCTGCT---ACATACATTTAATGTTGTCAGGAACCTT--A  1089

seq1  CCTGTGGGCA-GCTAACATAGTTTTATAAT-AGCAGAATCTA  1135
       ||||||||| ||||||||||  ||||||| |||||| ||||
seq2  GCTGTGGGCAGGCTAACATAG--TTATAATAAGCAGACTCTA  1129