BAC Information

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BAC

Clone NameB6Ng01-315M22
Chromosome7 (Build37)
Map Location 5,573,196 - 5,573,793
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem86b, Saps1, EG628211, 1500019G21Rik, Brsk1, BC022651, Suv420h2, Cox6b2, 4930401F20Rik, Il11, 4930572D21Rik, 2210411K11Rik, Rpl28, Ube2s, D430041B17Rik, Isoc2b, Isoc2a, LOC384524, Zfp628, Nat14, A430110N23Rik, LOC665049, Gm1079, Gm1078, Zfp579, Fiz1, Zfp524, 6430526N21Rik, 4632433K11Rik, Zfp784, Zfp580, Ccdc106, U2af2, Epn1, Rfpl4, Rasl2-9, EG665126, V1rd5, V1rd3, EG665150, Nlrp2, EG272350, V1rd4, EG665163, V1rd10, EG630071, EG665255, EG636697, EG636705, LOC636731
Downstream geneLOC673215, V1rd2, LOC100041627, LOC100041637, V1rd1, LOC100041647, V1rd11, LOC100041666, V1rd6, EG384525, EG269859, Nlrp4c, Zfp787, Zfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315M22.bB6Ng01-315M22.g
ACCGA106359GA106360
length1,2261,014
definitionB6Ng01-315M22.b B6Ng01-315M22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttataaccccatgggacaaggaattgttgagcgtgctcatcac
actctgaaaaattggcttttaaaaacaaaacaggggccgttgtacccccc
aaagtcatcaaaagcaaatcttgcttttgtcctgtttgttttaaagtttt
tgcaaactgatgttaaaagtctgtctgcagcagatccccactggcatcca
gttgcttccagttcatatgccatggctaaatggtgggacccattaagtaa
tatgtggaatggtccagaccccattttaatctggggaagaggttctgtct
gtttttatttattttttcacaaaaaaagaagatggagcgacatggctgcc
tgaaagactggtccgtcaaggggacacagatcttgaatattctagtaagt
atgattctaaccttgttgatggttaaaaatcctttttaccccccaaaaat
taatttggagcactgcctccactttcagagaatttttgacttttctgcta
attcccaaagtcacctcccccacaccgggtggtcagagtctgagcttgat
tgttgataatttgcaactgaataaagtacctggacttccccaaagaagct
tttatcctgttgttttccaactatctcgactttgtttttcaagcaggtca
gtctcttattacagcctgacttcagcaagcatgcagccttgcctccagca
agtgcaggtggcagaaattcatcaatatgaagaagcatattaagtatata
ttgtggctttggtctgatttgggaataaggtgtgctatgagggccggtca
gccaatgatggcaacaagatttcaaagctatatcaatctaagacagagat
acatgccaagaggctgtgttttgttaataatacaccacagagccatggtt
gtgtaaaataaacacaaacaagctgcatatatgccccttgatagataaga
gtggcttctggaaaatctgagtccccaagccaggcactggcacagccacc
ataattcccaggcaggactatggagcataatttaattttatgcctcgggt
cttacctattttaaattatatatcaagcggggaaattgtagcttccctta
ggctgaggtgggctggtaacagacttgttgccacctggaagggtggtgcc
cacttggggtcagctttctgactggacttgacctggtattgagagatggt
tctacataatcacgctatactctctc
gaattctacgggtctcaacccttccctgatgaagggcttctccacctgaa
ttttctctgaattttcctactttaaggagtgggtgggggtaggcttgttt
accgtgatcctatgcagtggagcgttgcttttgctctggatggtctgtaa
acttaaagcccaaacaaaaagggacaagatggtaatagcccaagcacttg
cagcattagaacacagtacctcccctgatatatggttatctatacttaag
caataggtcgctggccactcagctcttgcatcccacgaggctagtctcat
tgcacgggatagagtgagtgtgcttcagcagcccgagagagttgcacggc
taagcactgcagtagaaaggctctgtggcataaaatgagcctattctagg
gagacatgtcatctcgtatgaaggttgagtgtccaagtgtccttccccca
ggaaaaacgacatgggagccgaccaagacccctctgggtgatgagcctgg
gagaaggttttgtgtaatgcccctatttttgcacactggggatttgacct
ctatctccactctcaatatatgggtggcctattgctcttcaataaaagaa
aggggggagatgtgaggagctgcccttgcaatcgcaattacaagatggcg
ctgatatccggtgttctaactagtaaacaagtagtctgcgcatgtgctcg
ggtatttttccatgccttgtgccttggctgtcctgtggcagtcatttggg
ttgatagtgagcagctaatcaggagctgacacatctccaaccgctctttg
tgggttataaaaggactgagtttcctgtattcgagatcttcctgataagt
aagcaataaagctttgctgtagaaggatctggttgtccgagtgtgttttg
ctggtgaaacattacagacagattcacctatgctaaatctggtttgtgtg
catatacagaaacttatatttcctcctctagctacacacacaatgtgcac
gagagacaagagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_5573196_5573793
seq2: B6Ng01-315M22.g_490_1081

seq1  GGTTGAGTGTCCAAGTGTCCTTCCCCCAGGAAAAACGACATGGGAGCCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAGTGTCCAAGTGTCCTTCCCCCAGGAAAAACGACATGGGAGCCGA  50

seq1  CCAAGACCCCTCTGGGTGATGAGCCTGGGAGAAGGTTTTGTGTAATGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGACCCCTCTGGGTGATGAGCCTGGGAGAAGGTTTTGTGTAATGCCC  100

seq1  CTATTTTTGCACACTGGGGATTTGACCTCTATCTCCACTCTCAATATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTGCACACTGGGGATTTGACCTCTATCTCCACTCTCAATATATG  150

seq1  GGTGGCCTATTGCTCTTCAATAAAAGAAAGGGGGGAGATGTGAGGAGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCCTATTGCTCTTCAATAAAAGAAAGGGGGGAGATGTGAGGAGCTG  200

seq1  CCCTTGCAATCGCAATTACAAGATGGCGCTGATATCCGGTGTTCTAACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGCAATCGCAATTACAAGATGGCGCTGATATCCGGTGTTCTAACTA  250

seq1  GTAAACAAGTAGTCTGCGCATGTGCTCGGGTATTTTTCCATGCCTTGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAAGTAGTCTGCGCATGTGCTCGGGTATTTTTCCATGCCTTGTGC  300

seq1  CTTGGCTGTCCTGTGGCAGTCATTTGGGTTGATAGTGAGCAGCTAATCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTGTCCTGTGGCAGTCATTTGGGTTGATAGTGAGCAGCTAATCAG  350

seq1  GAGCTGACACATCTCCAACCGCTCTTTGTGGGTTATAAAAGGACTGAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGACACATCTCCAACCGCTCTTTGTGGGTTATAAAAGGACTGAGTT  400

seq1  TCCTGTATTCGAGATCTTCCTGATAAGTAAGCAATAAAGCTTTGCTGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTATTCGAGATCTTCCTGATAAGTAAGCAATAAAGCTTTGCTGTAG  450

seq1  AAGGATCTGGTTGTCCGAGTGTGTTTTGCTGGTGAAACATTACAAGGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||  ||| 
seq2  AAGGATCTGGTTGTCCGAGTGTGTTTTGCTGGTGAAACATTACA--GAC-  497

seq1  AGATTCACCTATGCTAAATCTGGTTTTGTGTGCATATACAAGAAAC-TAT  549
      ||||||||||||||||||||||| ||||||||||||||| |||||| |||
seq2  AGATTCACCTATGCTAAATCTGG-TTTGTGTGCATATAC-AGAAACTTAT  545

seq1  ATTTTCT-CTCTAGCTTACACACACAATGTGGAAAGAGAGACAAAGAGAC  598
      |||| || ||||||| |||||||||||||| | | ||||||| |||||||
seq2  ATTTCCTCCTCTAGC-TACACACACAATGT-GCACGAGAGAC-AAGAGAC  592