BAC Information

Click to search

BAC

Clone NameB6Ng01-315N13
Chromosome7 (Build37)
Map Location 145,134,950 - 145,263,739
singlet/doubletdoublet
Overlap geneLOC435235
Upstream geneMgmt, EG621804, Ebf3, 9430038I01Rik, Txnl2
Downstream geneTcerg1l, LOC100043290, Mapk1ip1, Ppp2r2d, Bnip3, EG668784, LOC669185, 6330417G02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315N13.bB6Ng01-315N13.g
ACCGA106389GA106390
length442958
definitionB6Ng01-315N13.b B6Ng01-315N13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(145,263,292 - 145,263,739)(145,134,950 - 145,135,741)
sequence
acttagttcagcacttagacggcacactaagatgctaggtttgggcattt
catctcagccaatattcaggaaactgcaagatctgagatacaactttgtt
catttgaacaggtgagaaagctcactcagggatctgaggtaacctgctcc
aaggtattaaccaaatgggaaaggcttatgcttggcttgtatctccccaa
tttttgatgtttttttaattccataatcttattcttctgagccaaagaag
gtgggagaaaggaattccaggaccatcctataggctgtgcagcctccgga
ctcatcttatttaaaccacacaggacaagcccatattcctctactgcaag
acatcagggagtacctggcagaaggtactcctactgccgggcatgttctc
aaccacaaaaggtctcagctgaagctgggacttgcagactgc
gaattcccagaattctgtgcaggagaggaacagattgctgtagatctagc
atagggaaaagaatgagaagagtctcaaaaggctaagggtgatgtgtagg
gccaagttacttctgctagtctggcatgaagccaccctggtgttgtcaca
gtactgttggaaggggacctgtatattgagctgtaataggaaatttagga
ggtcactgggtcctcatgctaggagtgttccagtgggatatctcctacag
gagggaggcgcttctctgctctagaagaaaggaagtatgtgaacctgttg
ggagccgactcttcacagacagcggctgtcatctctgcagccaactcaac
ctatttatttacttacaggtggtacttttccaccctgatgagagacttgt
tttcctagcatgatgtttctgcaaaaagcccaccacagttgaacacactc
tgataacatcttgcttttctcctatgcatcttggacctgtggttaagtgt
ctccagctgccctccccagcaagtgcatatatacccatagttgcctttca
aaagacgagccttgagccttgagcagatagcctgtgttgtctccattctt
cgagtctcttgtccctcagttcccactctctctctctttttttattaggt
attttcttcatttacatttccaatgctatcccaaaagtccctcatgccct
cccccccactcccctacccacccactcccacttcttggccctggcgttcc
cctgtactgaggcatataaggtttgcaagaccaacagaagaatggataca
aaaaaatgtggtacatttacacaatggagtactactcagctattaaaaag
aatgaatttgtgaaattcctaggcaaatgggatggacctggagggcatca
tcctgagtgaggtaacccaatcacaaaagaactcacatgatatgtactca
ctgataag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_145263292_145263739
seq2: B6Ng01-315N13.b_46_493 (reverse)

seq1  GCAGTCTGCAAGTCCCAGCTTCAGCTGAGACCTTTTGTGGTTGAGAACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCTGCAAGTCCCAGCTTCAGCTGAGACCTTTTGTGGTTGAGAACAT  50

seq1  GCCCGGCAGTAGGAGTACCTTCTGCCAGGTACTCCCTGATGTCTTGCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGGCAGTAGGAGTACCTTCTGCCAGGTACTCCCTGATGTCTTGCAGT  100

seq1  AGAGGAATATGGGCTTGTCCTGTGTGGTTTAAATAAGATGAGTCCGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAATATGGGCTTGTCCTGTGTGGTTTAAATAAGATGAGTCCGGAGG  150

seq1  CTGCACAGCCTATAGGATGGTCCTGGAATTCCTTTCTCCCACCTTCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACAGCCTATAGGATGGTCCTGGAATTCCTTTCTCCCACCTTCTTTG  200

seq1  GCTCAGAAGAATAAGATTATGGAATTAAAAAAACATCAAAAATTGGGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAAGAATAAGATTATGGAATTAAAAAAACATCAAAAATTGGGGAG  250

seq1  ATACAAGCCAAGCATAAGCCTTTCCCATTTGGTTAATACCTTGGAGCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGCCAAGCATAAGCCTTTCCCATTTGGTTAATACCTTGGAGCAGG  300

seq1  TTACCTCAGATCCCTGAGTGAGCTTTCTCACCTGTTCAAATGAACAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTCAGATCCCTGAGTGAGCTTTCTCACCTGTTCAAATGAACAAAGT  350

seq1  TGTATCTCAGATCTTGCAGTTTCCTGAATATTGGCTGAGATGAAATGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTCAGATCTTGCAGTTTCCTGAATATTGGCTGAGATGAAATGCCC  400

seq1  AAACCTAGCATCTTAGTGTGCCGTCTAAGTGCTGAACTAAGTGAATTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTAGCATCTTAGTGTGCCGTCTAAGTGCTGAACTAAGTGAATTC  448

seq1: chr7_145134950_145135741
seq2: B6Ng01-315N13.g_68_859

seq1  GAATTCCCAGAATTCTGTGCAGGAGAGGAACAGATTGCTGTAGATCTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGAATTCTGTGCAGGAGAGGAACAGATTGCTGTAGATCTAGC  50

seq1  ATAGGGAAAAGAATGAGAAGAGTCTCAAAAGGCTAAGGGTGATGTGTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGAAAAGAATGAGAAGAGTCTCAAAAGGCTAAGGGTGATGTGTAGG  100

seq1  GCCAAGTTACTTCTGCTAGTCTGGCATGAAGCCACCCTGGTGTTGTCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGTTACTTCTGCTAGTCTGGCATGAAGCCACCCTGGTGTTGTCACA  150

seq1  GTACTGTTGGAAGGGGACCTGTATATTGAGCTGTAATAGGAAATTTAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGTTGGAAGGGGACCTGTATATTGAGCTGTAATAGGAAATTTAGGA  200

seq1  GGTCACTGGGTCCTCATGCTAGGAGTGTTCCAGTGGGATATCTCCTACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACTGGGTCCTCATGCTAGGAGTGTTCCAGTGGGATATCTCCTACAG  250

seq1  GAGGGAGGCGCTTCTCTGCTCTAGAAGAAAGGAAGTATGTGAACCTGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGCGCTTCTCTGCTCTAGAAGAAAGGAAGTATGTGAACCTGTTG  300

seq1  GGAGCCGACTCTTCACAGACAGCGGCTGTCATCTCTGCAGCCAACTCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCGACTCTTCACAGACAGCGGCTGTCATCTCTGCAGCCAACTCAAC  350

seq1  CTATTTATTTACTTACAGGTGGTACTTTTCCACCCTGATGAGAGACTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTATTTACTTACAGGTGGTACTTTTCCACCCTGATGAGAGACTTGT  400

seq1  TTTCCTAGCATGATGTTTCTGCAAAAAGCCCACCACAGTTGAACACACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAGCATGATGTTTCTGCAAAAAGCCCACCACAGTTGAACACACTC  450

seq1  TGATAACATCTTGCTTTTCTCCTATGCATCTTGGACCTGTGGTTAAGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAACATCTTGCTTTTCTCCTATGCATCTTGGACCTGTGGTTAAGTGT  500

seq1  CTCCAGCTGCCCTCCCCAGCAAGTGCATATATACCCATAGTTGCCTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCTGCCCTCCCCAGCAAGTGCATATATACCCATAGTTGCCTTTCA  550

seq1  AAAGACGAGCCTTGAGCCTTGAGCAGATAGCCTGTGTTGTCTCCATTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACGAGCCTTGAGCCTTGAGCAGATAGCCTGTGTTGTCTCCATTCTT  600

seq1  CGAGTCTCTTGTCCCTCAGTTCCCACTCTCTCTCTCTTTTTTTATTAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTCTCTTGTCCCTCAGTTCCCACTCTCTCTCTCTTTTTTTATTAGGT  650

seq1  ATTTTCTTCATTTACATTTCCAATGCTATCCCAAAAGTCCCTCATGCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTCATTTACATTTCCAATGCTATCCCAAAAGTCCCTCATGCCCT  700

seq1  CCCCCCCACTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGCGTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCACTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGCGTTCC  750

seq1  CCTGTACTGAGGCATATAAGGTTTGCAAGACCAACAGAAGAA  792
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACTGAGGCATATAAGGTTTGCAAGACCAACAGAAGAA  792