BAC Information

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BAC

Clone NameB6Ng01-315O15
Chromosome7 (Build37)
Map Location 29,516,810 - 29,625,012
singlet/doubletdoublet
Overlap geneFbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4
Upstream geneZfp60, LOC100043229, LOC100043233, 4933426I21Rik, Zfp59, 4732475C15Rik, Prkcz2, 1700049G17Rik, EG668175, LOC100043771, Zfp780b, C130069I09Rik, LOC100043772, Psmc4, LOC100043774, 9530053A07Rik, Fbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27
Downstream geneLgals7, Capn12, Actn4, Eif3s12, Map4k1, Ryr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315O15.bB6Ng01-315O15.g
ACCGA106439GA106440
length1,1091,027
definitionB6Ng01-315O15.b B6Ng01-315O15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,623,893 - 29,625,012)(29,516,810 - 29,517,842)
sequence
gaattcaggaggtaaatctgggccttggtacttctttctaggcccatgat
gaccaaagtcctgtcacctatgcttcacatacccaaccctagagcaagct
ggagtcgtgggagtcacagagatcctgtttagcaggccctctgctgtctt
cgcggttcagcctctctcggagccacagctctgtacatatgacctggacc
ctgtctggaccctttccctcctcctcttcctcctcttcctcctcttcctc
cacctcctccttctctttttttcgttgttgtgggtttgtttgtttgttca
gttggttggtttggtttggcttttttgagtcagggtttctcagtatagct
ctggccatcctagaactcactttgtagaccaaggcatcctcgaactcaga
gatccacctgcctccaccttcagagtgctgggattaaatggtgtgccacc
accgcaggctcatcatcctcatttttactgtctctgttttctcctccttt
taattaactcctattctgaaagttcttcaaatcaatcaatcaattcattt
ctctgtctccatccccccacagtccccttcccaaaacacaaacaccaggg
tgttgatctgtggcccaggctggtctccttgcagtgaacattctgcctca
gcctcctgatgctgggatcacaggcagtagtcaccatgctgggctggact
ccatatttggcatcagcgctcccccacccctaccccacccccatgacagt
gtgtctgtaacttgttccgtctccccttcagtgataaactccccattttg
atccatcgacttgttgaagagcaggctgatcattttttatttttaaaata
tttatttactaaattttcatgtatgtgcctaagtacacatctgtgacccc
tgtgggggtcagagagggctcagagtccccggaactggacttacaaatga
ctatgcacttgggagctggcaactggacctagtctctggtttattcaaga
caggttcactattagtctgctgttctggcactctaatgcaagactagctg
gcatgaacttcacagagaatccacttgcctctagttctccagcactggat
ccgaggtgt
gaattcaaacaacactaggtatgcaagactttaaatggtcagccatggag
atgaagctaggtacagaaagagtgagaggcagcaggaagggtgcaggaac
ataggattggagaccaaagggtgtgggtctccaagaccctggagaaaaat
gacagagtaaaggaaatgatgggccttgggtgagaatatggtgggtagta
gactcactgccctccagtgccctccagctgagatcttcagatgggggcct
ggtggagggttgagacggaatagtctggatgcggctcggaggagcaagga
cactactggtttggaaggaacataagcagagacttggattctagatacct
tcaggaagaaagtatgagatatatagtgaattccaaggcccaagtgggtg
acacaagtctgggcagaaatggttttccctcattgacctttgttgttttt
tttaaaaagtctcactatgtgggacaggctagacttaaattcacagcaat
tctcctgcctctccctccagagtgcatgctctccaccacaccctgatggg
actagattagacttggagggagtctttggtcccagaggaaagggtgtgct
ctatatccttgtctgctgtcaggtatcctgacctcctgaccgggtccgtg
accttgggaagctgaacaccaacccctcttcacccagaggacgacgccag
cggcaggtcatgggagcgcggccctcgcgacggcagatgactgaagctcg
gcgcctggctctaaccaagctgccccctgagctgctggtgcaggtgctga
gccacgtgccgcctcgcgcgttagtgacccgctgccggccagtgtgcccg
ggcctggcgcgacctggtagatgggcccaagtatatggctgctgcaactg
gctcgcgaccgcagcgcggagggcagagccctctacgccttggcccagcg
ctgtcccgccgacgccgacgcgacgcgacgcgacggcaccgcacgacgag
tcccatctgcgctctgcccgattctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_29623893_29625012
seq2: B6Ng01-315O15.b_50_1158 (reverse)

seq1  ACACCTCGGATCCCAGTGCTGGAGAACTAGAGGCAAGTGGA-TCTCTGTG  49
      ||||||||||| ||||||||||||||||||||||||||||| ||||||||
seq2  ACACCTCGGAT-CCAGTGCTGGAGAACTAGAGGCAAGTGGATTCTCTGTG  49

seq1  -AGTTCAATGCCAGCCTAGTC-TGCATAGGGAGTGCCAGAACAGCCAGAC  97
       ||||| ||||||| |||||| |||||   |||||||||||||| |||||
seq2  AAGTTC-ATGCCAG-CTAGTCTTGCAT-TAGAGTGCCAGAACAG-CAGAC  95

seq1  CTAAATAGTGAGACCCTGTCTTGAATAAACCAGAAGGACCTAGGTCCAGT  147
         ||||||  || ||||||||||||||||||||  || |||||||||||
seq2  --TAATAGT--GAACCTGTCTTGAATAAACCAGA--GA-CTAGGTCCAGT  138

seq1  TGCCAGCTCCCAAGTGCATAGTCATTTGTAAGTCCAGTTCCGGGGACTCT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGCTCCCAAGTGCATAGTCATTTGTAAGTCCAGTTCCGGGGACTCT  188

seq1  GAGCCCTCCTCTGACCCCCACAGGGGTCACAGATGTGTACTTAGGCACAT  247
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCT-CTCTGACCCCCACAGGGGTCACAGATGTGTACTTAGGCACAT  237

seq1  ACATGAAAATTTAGTAAATAAATATTTTAAAAATAAAAAATGATCAGCCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAAATTTAGTAAATAAATATTTTAAAAATAAAAAATGATCAGCCT  287

seq1  GCTCTTCAACAAGTCGATGGATCAAAATGGGGAGTTTATCACCTGAAGGG  347
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCTCTTCAACAAGTCGATGGATCAAAATGGGGAGTTTATCA-CTGAAGGG  336

seq1  GAGACGGAACAAGTTACAGACACACTGTCATGGGGGTGGGGTAGGGGTGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACGGAACAAGTTACAGACACACTGTCATGGGGGTGGGGTAGGGGTGG  386

seq1  GGGAGCGCTGATGCCAAATATGGAGTCCAGCCCAGCATGGTGACTACTGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCGCTGATGCCAAATATGGAGTCCAGCCCAGCATGGTGACTACTGC  436

seq1  CTGTGATCCCAGCATCAGGAGGCTGAGGCAGAATGTTCACTGCAAGGAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATCCCAGCATCAGGAGGCTGAGGCAGAATGTTCACTGCAAGGAGA  486

seq1  CCAGCCTGGGCCACAGATCAACACCCTGGTGTTTGTGTTTTGGGAAGGGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTGGGCCACAGATCAACACCCTGGTGTTTGTGTTTTGGGAAGGGG  536

seq1  ACTGTGGGGGGATGGAGACAGAGAAATGAATTGATTGATTGATTTGAAGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGGGGGATGGAGACAGAGAAATGAATTGATTGATTGATTTGAAGA  586

seq1  ACTTTCAGAATAGGAGTTAATTAAAAGGAGGAGAAAACAGAGACAGTAAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAGAATAGGAGTTAATTAAAAGGAGGAGAAAACAGAGACAGTAAA  636

seq1  AATGAGGATGATGAGCCTGCGGTGGTGGCACACCATTTAATCCCAGCACT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGATGATGAGCCTGCGGTGGTGGCACACCATTTAATCCCAGCACT  686

seq1  CTGAAGGTGGAGGCAGGTGGATCTCTGAGTTCGAGGATGCCTTGGTCTAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGTGGAGGCAGGTGGATCTCTGAGTTCGAGGATGCCTTGGTCTAC  736

seq1  AAAGTGAGTTCTAGGATGGCCAGAGCTATACTGAGAAACCCTGACTCAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAGTTCTAGGATGGCCAGAGCTATACTGAGAAACCCTGACTCAAA  786

seq1  AAAGCCAAACCAAACCAACCAACTGAACAAACAAACAAACCCACAACAAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAAACCAAACCAACCAACTGAACAAACAAACAAACCCACAACAAC  836

seq1  GAAAAAAAGAGAAGGAGGAGGTGGAGGAAGAGGAGGAAGAGGAGGAAGAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAGAGAAGGAGGAGGTGGAGGAAGAGGAGGAAGAGGAGGAAGAG  886

seq1  GAGGAGGGAAAGGGTCCAGACAGGGTCCAGGTCATATGTACAGAGCTGTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGGAAAGGGTCCAGACAGGGTCCAGGTCATATGTACAGAGCTGTG  936

seq1  GCTCCGAGAGAGGCTGAACCGCGAAGACAGCAGAGGGCCTGCTAAACAGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCGAGAGAGGCTGAACCGCGAAGACAGCAGAGGGCCTGCTAAACAGG  986

seq1  ATCTCTGTGACTCCCACGACTCCAGCTTGCTCTAGGGTTGGGTATGTGAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGTGACTCCCACGACTCCAGCTTGCTCTAGGGTTGGGTATGTGAA  1036

seq1  GCATAGGTGACAGGACTTTGGTCATCATGGGCCTAGAAAGAAGTACCAAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGGTGACAGGACTTTGGTCATCATGGGCCTAGAAAGAAGTACCAAG  1086

seq1  GCCCAGATTTACCTCCTGAATTC  1120
      |||||||||||||||||||||||
seq2  GCCCAGATTTACCTCCTGAATTC  1109

seq1: chr7_29516810_29517842
seq2: B6Ng01-315O15.g_65_1091

seq1  GAATTCAAACAACACTAGGTATGCAAGACTTTAAATGGTCAGCCATGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACAACACTAGGTATGCAAGACTTTAAATGGTCAGCCATGGAG  50

seq1  ATGAAGCTAGGTACAGAAAGAGTGAGAGGCAGCAGGAAGGGTGCAGGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCTAGGTACAGAAAGAGTGAGAGGCAGCAGGAAGGGTGCAGGAAC  100

seq1  ATAGGATTGGAGACCAAAGGGTGTGGGTCTCCAAGACCCTGGAGAAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGATTGGAGACCAAAGGGTGTGGGTCTCCAAGACCCTGGAGAAAAAT  150

seq1  GACAGAGTAAAGGAAATGATGGGCCTTGGGTGAGAATATGGTGGGTAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGTAAAGGAAATGATGGGCCTTGGGTGAGAATATGGTGGGTAGTA  200

seq1  GACTCACTGCCCTCCAGTGCCCTCCAGCTGAGATCTTCAGATGGGGGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCACTGCCCTCCAGTGCCCTCCAGCTGAGATCTTCAGATGGGGGCCT  250

seq1  GGTGGAGGGTTGAGACGGAATAGTCTGGATGCGGCTCGGAGGAGCAAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGGGTTGAGACGGAATAGTCTGGATGCGGCTCGGAGGAGCAAGGA  300

seq1  CACTACTGGTTTGGAAGGAACATAAGCAGAGACTTGGATTCTAGATACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACTGGTTTGGAAGGAACATAAGCAGAGACTTGGATTCTAGATACCT  350

seq1  TCAGGAAGAAAGTATGAGATATATAGTGAATTCCAAGGCCCAAGTGGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAGAAAGTATGAGATATATAGTGAATTCCAAGGCCCAAGTGGGTG  400

seq1  ACACAAGTCTGGGCAGAAATGGTTTTCCCTCATTGACCTTTGTTGTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGTCTGGGCAGAAATGGTTTTCCCTCATTGACCTTTGTTGTTTTT  450

seq1  TTTAAAAAGTCTCACTATGTGGGACAGGCTAGACTTAAATTCACAGCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAGTCTCACTATGTGGGACAGGCTAGACTTAAATTCACAGCAAT  500

seq1  TCTCCTGCCTCTCCCTCCAGAGTGCATGCTCTCCACCACACCCTGATGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGCCTCTCCCTCCAGAGTGCATGCTCTCCACCACACCCTGATGGG  550

seq1  ACTAGATTAGACTTGGAGGGAGTCTTTGGTCCCAGAGGAAAGGGTGTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGATTAGACTTGGAGGGAGTCTTTGGTCCCAGAGGAAAGGGTGTGCT  600

seq1  CTATATCCTTGTCTGCTGTCAGGTATCCTGACCTCCTGACCGGGTCCGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCCTTGTCTGCTGTCAGGTATCCTGACCTCCTGACCGGGTCCGTG  650

seq1  ACCTTGGGAAGCTGAACACCAACCCCTCTTCACCCAGAGGACGACGCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGGAAGCTGAACACCAACCCCTCTTCACCCAGAGGACGACGCCAG  700

seq1  CGGCAGGTCATGGGAGCGCGGCCCTCGCGACGGCAGATGACTGAAGCTCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCAGGTCATGGGAGCGCGGCCCTCGCGACGGCAGATGACTGAAGCTCG  750

seq1  GCGCCTGGCTCTAACCAAGCTGCCCCCTGAGCTGCTGGTGCAGGTGCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCTGGCTCTAACCAAGCTGCCCCCTGAGCTGCTGGTGCAGGTGCTGA  800

seq1  GCCACGTGCCGCCTCGCGCGTTAGTGACCCGCTGCCGGCCAGTGTG-CCG  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GCCACGTGCCGCCTCGCGCGTTAGTGACCCGCTGCCGGCCAGTGTGCCCG  850

seq1  GGCCTGGCGCGACCTGGTAGAT-GGCCCAAGTATATGGCTGCTGCAACTG  898
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGCCTGGCGCGACCTGGTAGATGGGCCCAAGTATATGGCTGCTGCAACTG  900

seq1  GCTCGCGACCGCAGCGCGGAGGGCAGAGCCCTCTACGCCTTGGCCCAGCG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGCGACCGCAGCGCGGAGGGCAGAGCCCTCTACGCCTTGGCCCAGCG  950

seq1  CTGTCCCGCCGACGCCGACGCCGACGCCGACGCCGACGGCAACCGCCACG  998
      |||||||||||||||||||| ||||| ||||| ||||||| |||| ||||
seq2  CTGTCCCGCCGACGCCGACG-CGACG-CGACG-CGACGGC-ACCG-CACG  995

seq1  ACGAGTTCCCATTCTGCGCTCTGGCCCGATTCTGC  1033
      ||||| ||||| |||||||||| ||||||||||||
seq2  ACGAG-TCCCA-TCTGCGCTCT-GCCCGATTCTGC  1027