MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-315O23
Chromosome	7 (Build37)
Map Location	80,768,748 - 80,888,714
singlet/doublet	doublet
Overlap gene	LOC244061, A830073O21Rik
Upstream gene	LOC100042880, LOC233391, LOC665570, LOC100042029, EG384643, LOC625243, 4930429H19Rik, LOC665588, Rgma, Chd2, 1810026B05Rik, EG665610
Downstream gene	St8sia2, LOC100042127, LOC100042140, LOC546979, Slco3a1, EG665308, EG665641
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042880 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042880
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 874 ESTs, 9 Proteins

name	LOC233391 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:233391
definition	note : 2310037I24Rik pseudogene pseudo : _no_value

name	LOC665570 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665570
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 14 Proteins pseudo : _no_value

name	LOC100042029 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042029
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG384643 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384643 MGI:3647920
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 Proteins pseudo : _no_value

name	LOC625243 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625243
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	4930429H19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73897 MGI:1921147
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC665588 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665588
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins pseudo : _no_value

name	Rgma (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244058 MGI:2679262
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244059 MGI:2448567
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 38 ESTs, 6 Proteins

name	1810026B05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69170 MGI:1916420
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	EG665610 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665610 MGI:3644623
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	LOC244061 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:244061
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 5 Proteins pseudo : _no_value

name	A830073O21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320262 MGI:2443692
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	St8sia2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20450 MGI:106020
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042127 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042127
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100042140 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042140
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC546979 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	Slco3a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108116 MGI:1351867
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG665308 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665308 MGI:3646746
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	EG665641 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665641 MGI:3647356
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC100042880 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257512 GeneID:100042880
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 874 ESTs, 9 Proteins product : similar to Rpl17 protein transcript_id : XM_001478911.1

name	LOC625243 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257515 GeneID:625243
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC625243 transcript_id : XM_001478938.1

name	4930429H19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380564 GeneID:73897 MGI:1921147
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 4930429H19 gene transcript_id : XM_977950.1

name	Rgma (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359793 GeneID:244058 MGI:2679262
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RGM domain family, member A transcript_id : NM_177740.3

name	Chd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257517 GeneID:244059 MGI:2448567
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 38 ESTs, 6 Proteins product : chromodomain helicase DNA binding protein 2 transcript_id : XM_001478970.1

name	1810026B05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380566 GeneID:69170 MGI:1916420
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : RIKEN cDNA 1810026B05 gene, transcript variant 2 transcript_id : XM_897347.2

name	EG665610 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380579 GeneID:665610 MGI:3644623
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : predicted gene, EG665610 transcript_id : XM_978127.1

name	A830073O21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82524305 GeneID:320262 MGI:2443692
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A830073O21 gene transcript_id : NM_177118.3

name	St8sia2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677964 GeneID:20450 MGI:106020
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 transcript_id : NM_009181.1

name	Slco3a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84579877 GeneID:108116 MGI:1351867
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 3a1 transcript_id : NM_001038643.1

name	Slco3a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84579879 GeneID:108116 MGI:1351867
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 3a1 transcript_id : NM_023908.2

name	EG665308 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380555 GeneID:665308 MGI:3646746
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : predicted gene, EG665308 transcript_id : XM_977583.1

name	LOC100042880 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257513 GeneID:100042880
definition	codon_start : 1 product : similar to Rpl17 protein protein_id : XP_001478961.1

name	LOC625243 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257516 GeneID:625243
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478988.1

name	4930429H19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94380565 GeneID:73897 MGI:1921147
definition	codon_start : 1 product : hypothetical protein LOC73897 protein_id : XP_983044.1

name	Rgma (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244230 CCDS:CCDS21362.1 GeneID:244058 MGI:2679262
definition	GO_component : GO:0009986 - cell surface [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0001843 - neural tube closure [Evidence IMP] codon_start : 1 note : repulsive guidance molecule A product : RGM domain family, member A protein_id : NP_808408.1

name	Chd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257518 GeneID:244059 MGI:2448567
definition	codon_start : 1 product : chromodomain helicase DNA binding protein 2 protein_id : XP_001479020.1

name	1810026B05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94380567 GeneID:69170 MGI:1916420
definition	codon_start : 1 product : hypothetical protein LOC69170 isoform 2 protein_id : XP_902440.2

name	EG665610 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94380580 GeneID:665610 MGI:3644623
definition	codon_start : 1 product : hypothetical protein protein_id : XP_983221.1

name	A830073O21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893065 GeneID:320262 MGI:2443692
definition	codon_start : 1 product : hypothetical protein LOC320262 protein_id : NP_796092.1

name	St8sia2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677965 CCDS:CCDS21365.1 GeneID:20450 MGI:106020
definition	GO_component : GO:0030173 - integral to Golgi membrane [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003828 - alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity [Evidence IDA]; GO:0008373 - sialyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0006486 - protein amino acid glycosylation [Evidence IEA] codon_start : 1 exception : mismatches in translation note : sialyltransferase 8 (alpha-2, 8-sialyltransferase) B product : ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 protein_id : NP_033207.1

name	Slco3a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84579878 CCDS:CCDS21366.1 GeneID:108116 MGI:1351867
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; androgen regulated protein 1; solute carrier family 21 (organic anion transporter), member 11 product : solute carrier organic anion transporter family, member 3a1 isoform 2 protein_id : NP_001033732.1

name	Slco3a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84579880 CCDS:CCDS21367.1 GeneID:108116 MGI:1351867
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; androgen regulated protein 1; solute carrier family 21 (organic anion transporter), member 11 product : solute carrier organic anion transporter family, member 3a1 isoform 1 protein_id : NP_076397.2

name	EG665308 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94380556 GeneID:665308 MGI:3646746
definition	codon_start : 1 product : hypothetical protein protein_id : XP_982677.1

name	LOC100042029 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042029
definition	number : 1 pseudo : _no_value

name	LOC100042029 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042029
definition	number : 2 pseudo : _no_value

name	EG384643 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384643
definition	number : 1 pseudo : _no_value

name	LOC100042127 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042127
definition	number : 6 pseudo : _no_value

name	LOC100042127 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042127
definition	number : 5 pseudo : _no_value

name	LOC100042127 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042127
definition	number : 4 pseudo : _no_value

name	LOC100042127 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042127
definition	number : 3 pseudo : _no_value

name	LOC100042127 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042127
definition	number : 2 pseudo : _no_value

name	LOC100042127 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042127
definition	number : 1 pseudo : _no_value

name	LOC100042140 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042140
definition	number : 3 pseudo : _no_value

name	LOC100042140 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042140
definition	number : 2 pseudo : _no_value

name	LOC100042140 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042140
definition	number : 1 pseudo : _no_value

name	LOC546979 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546979
definition	number : 1 pseudo : _no_value

name	LOC546979 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546979
definition	number : 2 pseudo : _no_value

name	LOC546979 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546979
definition	number : 3 pseudo : _no_value

name	EG665641 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665641
definition	number : 1 pseudo : _no_value

name	EG665641 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665641
definition	number : 2 pseudo : _no_value

name	EG665641 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665641
definition	number : 3 pseudo : _no_value

name	EG665641 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665641
definition	number : 4 pseudo : _no_value

name	EG665641 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665641
definition	number : 5 pseudo : _no_value

name	LOC665570 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257514 GeneID:665570
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 14 Proteins product : similar to LOC654472 protein pseudo : _no_value transcript_id : XR_033989.1

name	LOC665588 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257491 GeneID:665588
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : similar to rpL21 protein pseudo : _no_value transcript_id : XR_033243.1

name	LOC244061 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257492 GeneID:244061
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 5 Proteins product : similar to Smad nuclear interacting protein 1 pseudo : _no_value transcript_id : XR_033282.1

clone name	MSMg01-459G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508D04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-417F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302I14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-315O23.b	B6Ng01-315O23.g
ACC	GA106455	GA106456
length	82	873
definition	B6Ng01-315O23.b	B6Ng01-315O23.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(80,888,633 - 80,888,714)	(80,768,748 - 80,769,617)
sequence	tctgaatatcccaacatgcatatatttcatcttcctcttccttcattaac atcagaaaaagaatatcacggtgggggggggg	gaattcctggggcttgctactttctcagggatggcaccgcccataggggg ctaggctagcacacactaatcagcaaacatgaatcacatcacagatgtac ccacagaccagtcagatggacgcaattcctcaactgaggttccctcttcc caggtgattagtttgtgtcaagttgacaaacacaaatcagcatctcacta aatggagggaggagcccacgtggttagacagcattccagaagagatctct tttctttgctcagaaaagaaggtagagttgctaggctgggcagctgcagg aagaagctggctgtagctctgtgaggatggatgatgggagccagggggcg agggatataggccaagacagcaaagaaaagcagggtaggggagccagggt aggagggtctcagcccaggtgctgcaggctctcactcagcagcctggagg aagcagtcaggaaagcttgctggtttggccagagtaatgtctaggttcct atgttaggctcccagcattcctgtggttttctaggtgttagcattaaagt gtctgctttctggaagggtgctccatggctctcaggctcttgaaggaatt gtaaaacgcttattagtcatcagcagtttctgacagtttaaacgagagag aaagggggaaaaaacccaaaaaccttgcacctcacacctgtcagtatgtg ggagaaactgcactggaacctctaactgctaaaacagactctcaacctgt aggtcttgtgtgtgtgtgtgtagaatgacattttcagaggggtagcctaa gaccactggaaaacacaggtatttacattacttttttttttttgtttttg tttgttttttttcccagacaggg
quality values	Open. Hide. 49 58 58 58 36 50 41 35 30 58 58 31 38 58 44 58 58 58 45 58 58 58 54 53 45 41 31 14 31 45 52 58 58 58 58 58 58 58 58 58 58 58 58 49 54 58 58 58 58 54 58 58 54 54 58 58 58 58 58 58 62 62 54 54 62 49 62 62 33 46 46 25 49 62 62 46 36 46 62 62 41 15	Open. Hide. 62 47 47 41 62 62 62 56 62 56 56 36 41 56 56 62 30 25 51 47 62 62 62 62 62 62 47 62 62 49 32 44 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 49 62 59 59 62 59 62 62 49 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 49 62 62 49 49 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 56 62 62 62 49 62 62 62 54 47 62 49 47 62 62 49 47 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 47 47 62 62 62 56 62 62 62 62 62 56 54 62 62 62 62 62 62 46 62 62 62 62 62 56 62 62 51 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 56 50 56 62 62 56 56 56 56 62 62 62 62 62 56 41 62 52 62 62 62 62 52 62 62 62 62 52 62 54 50 62 62 62 62 62 47 42 62 62 62 52 62 54 52 62 62 62 62 62 62 52 54 52 52 54 52 58 52 54 52 49 54 58 58 58 45 48 54 52 49 58 46 54 58 54 54 58 58 54 54 58 58 58 52 52 52 52 52 52 54 58 58 54 54 51 58 52 54 54 41 52 52 49 54 52 54 54 52 52 52 54 54 58 54 54 58 58 54 52 54 58 58 58 50 58 51 51 54 50 49 50 51 54 51 58 58 51 54 58 49 49 51 51 50 49 49 51 50 53 58 48 51 50 31 58 48 50 54 42 48 50 44 42 53 51 48 50 58 53 58 50 53 29 58 42 51 53 58 50 51 58 51 32 54 58 32 31 58 58 50 51 48 44 42 27 32 42 50 49 53 39 39 49 40 50 50 42 51 50 53 36 43 51 42 58 58 37 41 53 50 53 42 43 42 58 58 41 40 44 44 44 40 54 32 49 41 51 31 53 54 37 29 49 18 38 35 19 27 36 33 33 31 34 31 36 23 45 40 52 29 39 34 41 47 46 39 21 35 42 47 37 37 40 40 34 38 40 53 37 52 40 29 53 41 37 54 52 54 54 47 39 32 52 41 25 23 47 47 32 28 32 32 52 41 36 15 16 31 33 32 41 28 34 34 32 52 40 52 31 40 40 31 31 31 34 35 26 42 38 31 31 31 32 31 33 31 45 31 35 12 32 31 38 31 33 51 30 41 32 45 35 43 31 41 30 43 32 37 31 29 38 42 41 28 31 30 17 25 37 48 46 28 32 32 21 46 11 48 46 40 27 32 31 37 24 29 24 31 26 36 19 12 16 23 31 25 29 33 41 41 23 18 18 29 27 11 23 31 26 24 47 19 16 29 21 25 24 25 29 31 47 47 48 47 47 47 47 47 48 48 29 38 23 44 47 44 24 20 18 48 37 31 26 44 44 47 43 44 44 20 23 38 16 9 18 36 9 19 25 17 15

Alignment Information

BAC End 1

BAC End 2

seq1: chr7_80888633_80888714
seq2: B6Ng01-315O23.b_51_132 (reverse)

seq1  CCCCCCCCCCACCGTGATATTCTTTTTCTGATGTTAATGAAGGAAGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCACCGTGATATTCTTTTTCTGATGTTAATGAAGGAAGAGGA  50

seq1  AGATGAAATATATGCATGTTGGGATATTCAGA  82
      ||||||||||||||||||||||||||||||||
seq2  AGATGAAATATATGCATGTTGGGATATTCAGA  82

seq1: chr7_80768748_80769617
seq2: B6Ng01-315O23.g_66_938

seq1  GAATTCCTGGGGCTTGCTACTTTCTCAGGGATGGCACCGCCCATAGGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGGGCTTGCTACTTTCTCAGGGATGGCACCGCCCATAGGGGG  50

seq1  CTAGGCTAGCACACACTAATCAGCAAACATGAATCACATCACAGATGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTAGCACACACTAATCAGCAAACATGAATCACATCACAGATGTAC  100

seq1  CCACAGACCAGTCAGATGGACGCAATTCCTCAACTGAGGTTCCCTCTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGACCAGTCAGATGGACGCAATTCCTCAACTGAGGTTCCCTCTTCC  150

seq1  CAGGTGATTAGTTTGTGTCAAGTTGACAAACACAAATCAGCATCTCACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGATTAGTTTGTGTCAAGTTGACAAACACAAATCAGCATCTCACTA  200

seq1  AATGGAGGGAGGAGCCCACGTGGTTAGACAGCATTCCAGAAGAGATCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGGGAGGAGCCCACGTGGTTAGACAGCATTCCAGAAGAGATCTCT  250

seq1  TTTCTTTGCTCAGAAAAGAAGGTAGAGTTGCTAGGCTGGGCAGCTGCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGCTCAGAAAAGAAGGTAGAGTTGCTAGGCTGGGCAGCTGCAGG  300

seq1  AAGAAGCTGGCTGTAGCTCTGTGAGGATGGATGATGGGAGCCAGGGGGCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTGGCTGTAGCTCTGTGAGGATGGATGATGGGAGCCAGGGGGCG  350

seq1  AGGGATATAGGCCAAGACAGCAAAGAAAAGCAGGGTAGGGGAGCCAGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATATAGGCCAAGACAGCAAAGAAAAGCAGGGTAGGGGAGCCAGGGT  400

seq1  AGGAGGGTCTCAGCCCAGGTGCTGCAGGCTCTCACTCAGCAGCCTGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGTCTCAGCCCAGGTGCTGCAGGCTCTCACTCAGCAGCCTGGAGG  450

seq1  AAGCAGTCAGGAAAGCTTGCTGGTTTGGCCAGAGTAATGTCTAGGTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTCAGGAAAGCTTGCTGGTTTGGCCAGAGTAATGTCTAGGTTCCT  500

seq1  ATGTTAGGCTCCCAGCATTCCTGTGGTTTTCTAGGTGTTAGCATTAAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAGGCTCCCAGCATTCCTGTGGTTTTCTAGGTGTTAGCATTAAAGT  550

seq1  GTCTGCTTTCTGGAAGGGTGCTCCATGGCTCTCAGGCTCTTGAAGGAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCTTTCTGGAAGGGTGCTCCATGGCTCTCAGGCTCTTGAAGGAATT  600

seq1  GTAAAACGCTTATTAGTCATCAGCAGTTTCTGACAGTTTAAACGAGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACGCTTATTAGTCATCAGCAGTTTCTGACAGTTTAAACGAGAGAG  650

seq1  AAAGGGGGAAAAAACCCAAAAACCTTGCACCTCACACCTGTCAGTATGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGGGAAAAAACCCAAAAACCTTGCACCTCACACCTGTCAGTATGTG  700

seq1  GGAGAAACTGCACTGGAACCTCTAACTGCTAAAACAGACTCTCAACCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAACTGCACTGGAACCTCTAACTGCTAAAACAGACTCTCAACCTGT  750

seq1  AGGTCTTGTGTGTGTGTGTGTAGAATGACATTTTCAGAGGGGTAGCCTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTGTGTGTGTGTGTGTAGAATGACATTTTCAGAGGGGTAGCCTAA  800

seq1  GACCACTGGAAAACACAGGTATTTACATTAC-TTTTTTTTTTTGTTTTTG  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GACCACTGGAAAACACAGGTATTTACATTACTTTTTTTTTTTTGTTTTTG  850

seq1  TTTGTTTTTTT--CCAGACAGGG  870
      |||||||||||  ||||||||||
seq2  TTTGTTTTTTTTCCCAGACAGGG  873

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information