BAC Information

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BAC

Clone NameB6Ng01-317F13
Chromosome7 (Build37)
Map Location 21,532,372 - 21,533,225
singlet/doubletsinglet
Overlap genenone
Upstream gene2210010C17Rik, EG243872, Ceacam20, Nlrp9b, EG667040, EG667067, LOC620401, V1rd21, EG620537, LOC100043519, EG620574, LOC100043523, EG545926, LOC100043528, LOC100042964, LOC100042966, LOC100043533, EG435949, LOC100043536, LOC100042968, LOC100042971, EG667129, EG667135, EG435946, LOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936, LOC100043559, LOC667311, LOC100043561, LOC667302, EG667292, LOC100043566
Downstream geneLOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016, LOC100043602, LOC100043604, EG667378, LOC100043607
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317F13.bB6Ng01-317F13.g
ACCGA107515GA107516
length995856
definitionB6Ng01-317F13.b B6Ng01-317F13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgtgggattttg
tgaactgctttctcagcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcatatccctgcat
cactggaataaaacctacttggtcaggatggatgattgttttgatgtgtt
cttggatttggttagtgagaactttattgagtatttttgcatcaatattc
ataagcaaattgttctgaagttctctatctttgttagatctttctgtggt
ttaggtatcagagtaattgtggcttcatagaatgagttgggtagagtgcc
ttctacttctattttgtggaattgtttgtgcagaactggaattagatctt
ctttgaaggtctgatagaactctgcactaaacctgtctggtcctgggctt
ttttggttgggagaccattaatgactgcttctatttctttaggggatatg
ggactgtttagatccttaacttgatcctggtttaactttggtaccttgta
tctgtctagaaatttgttcatttcgtccagcttttccagttttgttgact
atagacatttgtagaagaatctgatggtgttttggatttcttcaggatct
gttgttatgtctcccttttcatttctgattttgttaattaggatgctgtt
cctgtgccctctagtgagtcttgctaagggtttatctatcttgttgattt
tctcaaagaaccagctcctcatttggttgattctttgaatagttcttctt
tgtttccacttggtttatttcgccccctgagtatatttcctgccgtctac
tcctccttgggtaattttcttcctttttttctagagctttttaggtgtgc
tgtccacctgctagtggtgttgctctctctagtttcctttttggaaggca
ctcagagcttatgagttttttccatagaaatggcttccttggtgt
gaattctttaaagaaagtaaaaaagaaagagaaaagaaaaaaaaaagaaa
agaacttcaggaaagagagagagagagagagagagagagagagagagaga
gagagagagagagaaagagaatgagagagagagaatgaaaatagtaaatg
ggcttttcaagggagacacagtttcttggcagtagatagacataggatct
ttttttttttctttttttttttttggcaattgattttttactacacaaca
aggttgtaaaatgagaattggtcaaaccaaggcacagagatgagaaattt
cttggcgggaatcttcaagaagtgtagggacaaacgacataaatttatag
aatgaacagttgtaaaatcatcagacaacaccaaatcgttaaccatttag
agttcaaagttttgtttttttgctttttttaattaggtattttcctcatt
tacattttcaatgctatcccaaaggtcccccatacccacccccccccaat
cccctaccaacccactccccctttttggccctggcgttcccctgtactga
ggcatataaagtttgcaagtccaatgggcctctctttgcagtgatggccg
actaggccatcttttgatacatatgcagctagagtcaagagctcccgggt
actggttagctcatattgttgttccacctgtagggttgcagttccctata
gctccttgggtaatttctctagctcctccattaggggccgtgtgacccat
ccaatagctgactgtgatcatccactttctgtgtttgctaggccccggca
tagtctcacaagagagagtcataaactgggtcctttctgcaaaatcttgc
ttgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_21532372_21533225
seq2: B6Ng01-317F13.g_65_920

seq1  GAATTCTTTAAAGAAAGTAAAAAAGAAAGAGAAAAGAAAAAAAAAAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAGAAAGTAAAAAAGAAAGAGAAAAGAAAAAAAAAAGAAA  50

seq1  AGAACTTCAGGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTCAGGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  100

seq1  GAGAGAGAGAGAGAAAGAGAATGAGAGAGAGAGAATGAAAATAGTAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAAAGAGAATGAGAGAGAGAGAATGAAAATAGTAAATG  150

seq1  GGCTTTTCAAGGGAGACACAGTTTCTTGGCAGTAGATAGACATAGGATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTCAAGGGAGACACAGTTTCTTGGCAGTAGATAGACATAGGATCT  200

seq1  TTTTTTTTTTCTTTTTTTTTTTTTGGCAATTGATTTTTTACTACACAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTCTTTTTTTTTTTTTGGCAATTGATTTTTTACTACACAACA  250

seq1  AGGTTGTAAAATGAGAATTGGTCAAACCAAGGCACAGAGATGAGAAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTAAAATGAGAATTGGTCAAACCAAGGCACAGAGATGAGAAATTT  300

seq1  CTTGGCGGGAATCTTCAAGAAGTGTAGGGACAAACGACATAAATTTATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCGGGAATCTTCAAGAAGTGTAGGGACAAACGACATAAATTTATAG  350

seq1  AATGAACAGTTGTAAAATCATCAGACAACACCAAATCGTTAACCATTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACAGTTGTAAAATCATCAGACAACACCAAATCGTTAACCATTTAG  400

seq1  AGTTCAAAGTTTTGTTTTTTTGCTTTTTTTAATTAGGTATTTTCCTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAAGTTTTGTTTTTTTGCTTTTTTTAATTAGGTATTTTCCTCATT  450

seq1  TACATTTTCAATGCTATCCCAAAGGTCCCCCATACCCACCCCCCCCCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTCAATGCTATCCCAAAGGTCCCCCATACCCACCCCCCCCCAAT  500

seq1  CCCCTACCAACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTACCAACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGA  550

seq1  GGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCG  600

seq1  ACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCCGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCCGGGT  650

seq1  ACTGGTTAGCTCATATTGTTGTTCCACCTGTAGGGTTGCAGTTCCCTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTAGCTCATATTGTTGTTCCACCTGTAGGGTTGCAGTTCCCTATA  700

seq1  GCTCCTTGGGTAATTTCTCTAGCTCCTCCATTAGGGGCCGTGTGACCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTGGGTAATTTCTCTAGCTCCTCCATTAGGGGCCGTGTGACCCAT  750

seq1  CCAATAGCTGACTGTGATCATCCAC-TTCTGTGTTTGCTAGGCCCCGGCA  799
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCAATAGCTGACTGTGATCATCCACTTTCTGTGTTTGCTAGGCCCCGGCA  800

seq1  TAGTCTCACAAGAGAGAGCTAT-AACTGGGTCCTTTCAGCGAAATCTTGC  848
      ||||||||||||||||||  || |||||||||||||| || |||||||||
seq2  TAGTCTCACAAGAGAGAGTCATAAACTGGGTCCTTTCTGCAAAATCTTGC  850

seq1  TAGTGT  854
      | ||||
seq2  TTGTGT  856