BAC Information

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BAC

Clone NameB6Ng01-317M14
Chromosome7 (Build37)
Map Location 62,009,822 - 62,043,220
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668789, Mrps33p, LOC622146
Downstream geneLuzp2, LOC668796, Siglech
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317M14.bB6Ng01-317M14.g
ACCGA107845GA107846
length1,1701,130
definitionB6Ng01-317M14.b B6Ng01-317M14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,042,040 - 62,043,220)(62,009,822 - 62,010,954)
sequence
gaattcctctaatataacataaagagaagactcttcttagtttctggagg
gaggaaggaaaataagtcttgtttccttagttggcattaagtaatatgtc
tcaggcatgccttctatgtctctaagtggctataactatcctggcttatt
ttccagctttgtctaacatcatcctggtgggtgttctgagttcctcctca
cagtctgcttgggttcaaagcccagatttgccatttgaatgttgtgggag
tgaagaagaagcagcatttcttcagtgacagttgattgcatggaacaaat
atgtttcaattattttcttccactattgggctgcctcctcaggagcaagt
aacccacaaatccttcatatttgtggatcagatattgattaaaagaaaat
ttaacaatctcactgaactgcatttagggtcttgctgtgctttggatata
agatatctacaggtactgactgataaattcttgatcttcagataatcatt
gttcagtatttttggtggttggattataaggcttttggcttcattaaaag
gttagtctactgatgactcagcccaatagactaatggaaattcttggaaa
atgttcaagttaggacctggtttgtcccttgtttgtgcccttgaaaatat
tggctgttttgccattggctttttatgttaagagagaaaatttgtcttac
atttaagtgaggaaataaaaatggaagaaatgacattacagaagtaacat
gtattaatattacacacagtctaaataatttatccaggaaataaaaatat
attctaaaacagtaaacttttagtcaaaaaataaaatgaaaatatattat
gtgcagtatagttacattaaaatccaagtccaatatccactctgaaatgg
gataaatgcagagcagaatcaatggtaaaaatcagataagatctaaaacc
cttctgtgtaaatggcagaaagctgcttgaatgggtaaactgtgaagagc
taagactttagacaaaggtacattcaggagccttctgactctgggacttt
tctctggctgtatatgatgtagtttcaggaccagaacagagaaaagacag
agtcttacttccagaaggagagctgaaaagagccttctaattgcttctgt
gtttaagaaaccacactgag

gaattctttatttgactgtgatatgcactttatatgggatgtcaacggaa
tgctgaatgttagaccatctctatttctttaatttaaaattcagtcaaat
ttcaccagatcaaaggctctccgtagaattcatctagaagtgaatagcct
gaagctgacttgggggattggtggatctttaacatcaaaatgaagaagat
gataagatatgattagatggttttgcttctgttttacttctatgcttcag
agtaaatggaaaatgctgagagcagtgccttaaagttccaaacatggaat
ttgtagaatgtggtaataagaagcagaggaaaataacactgtagaaagta
tatctggccctttcaatccaaggtacgggatcataaagagtcaaattgga
agtcatgatagctatcacaatatctcatcaagatagctaaacttatgtac
ataagttttgagatacacacacaaaaatattagtacatatatttgcctcc
caccatctgtaataaactatgggatatcttgaactataacataaatgatt
atccactaatggatagtcagctttaaatatcgacctaattaagctcttga
gctcttgacagttcctcagtaactggcagaaaaatgctatgcctaggtga
agtgggaagatgaacctggcatccccagcataacgccatagaggctcata
caaagaagagtgaagggttgggccagggcttttatatcgtctcaagtttt
agtcccaatgatctcacattttggaaactgccataaattttaatacagaa
aaatcatagatctgcataactgtttatttcactttaattgtagaaacatt
atcattttttatggtgagacagaagatacattaccctgaacatagggaac
aggaactataagcaataaacagaaagtagaaactgtgacttaaatgcagg
aaacagggaacgattacctaaacacagaggtaacagcttatgcctaagct
cagaggtaagaaatattccccaaacaaagaagtttaatctacagttagga
gcatgactgtcatgatggaagagtatgttttatcagaatttcttagaaac
aagtatcactagcctattttcaaggagaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_62042040_62043220
seq2: B6Ng01-317M14.b_48_1217 (reverse)

seq1  CTCAGTGTGGTCTCT--AACACAGAAAGCAAATTAGAAGGGCTCCTTCTC  48
      ||||||||||| |||  ||||||| |||| |||||||| |||| ||| ||
seq2  CTCAGTGTGGTTTCTTAAACACAG-AAGC-AATTAGAA-GGCT-CTTTTC  46

seq1  AGCCTCTTCTTCTGG-AGT-AGACTCTGGTTCTTTTCCTCCTGTCTGGTC  96
      || |||| ||||||| ||| ||||||||  |||||| |||   |||||||
seq2  AG-CTCTCCTTCTGGAAGTAAGACTCTG--TCTTTT-CTCTGTTCTGGTC  92

seq1  CTGAAACTAACAAATACAATAAATACAGCCAGAGAAAAGTCCCAGAGGTC  146
      |||||||       ||||  | |||||||||||||||||||||||| |||
seq2  CTGAAAC-------TACATCATATACAGCCAGAGAAAAGTCCCAGA-GTC  134

seq1  AGAAGGCTCCTGAATGTACCTTTGTCTAAAGTCTTAGCTCTTCACAGTTT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCTCCTGAATGTACCTTTGTCTAAAGTCTTAGCTCTTCACAGTTT  184

seq1  A-CCATTCAAGCAGCTTTCTGCCATTTACACAGAAGGGTTTTAGATCTTA  245
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTCAAGCAGCTTTCTGCCATTTACACAGAAGGGTTTTAGATCTTA  234

seq1  TCTGATTTTTACCATTGATTCTGCTCTGCATTTATCCCATTTCAGAGTGG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTTTTACCATTGATTCTGCTCTGCATTTATCCCATTTCAGAGTGG  284

seq1  ATATTGGACTTGGATTTTAATGTAACTATACTGCACATAATATATTTTCA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGACTTGGATTTTAATGTAACTATACTGCACATAATATATTTTCA  334

seq1  TTTTATTTTTTGACTAAAAGTTTACTGTTTTAGAATATATTTTTATTTCC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTTTGACTAAAAGTTTACTGTTTTAGAATATATTTTTATTTCC  384

seq1  TGGATAAATTATTTAGACTGTGTGTAATATTAATACATGTTACTTCTGTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAAATTATTTAGACTGTGTGTAATATTAATACATGTTACTTCTGTA  434

seq1  ATGTCATTTCTTCCATTTTTATTTCCTCACTTAAATGTAAGACAAATTTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATTTCTTCCATTTTTATTTCCTCACTTAAATGTAAGACAAATTTT  484

seq1  CTCTCTTAACATAAAAAGCCAATGGCAAAACAGCCAATATTTTCAAGGGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTAACATAAAAAGCCAATGGCAAAACAGCCAATATTTTCAAGGGC  534

seq1  ACAAACAAGGGACAAACCAGGTCCTAACTTGAACATTTTCCAAGAATTTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAGGGACAAACCAGGTCCTAACTTGAACATTTTCCAAGAATTTC  584

seq1  CATTAGTCTATTGGGCTGAGTCATCAGTAGACTAACCTTTTAATGAAGCC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGTCTATTGGGCTGAGTCATCAGTAGACTAACCTTTTAATGAAGCC  634

seq1  AAAAGCCTTATAATCCAACCACCAAAAATACTGAACAATGATTATCTGAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCTTATAATCCAACCACCAAAAATACTGAACAATGATTATCTGAA  684

seq1  GATCAAGAATTTATCAGTCAGTACCTGTAGATATCTTATATCCAAAGCAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAGAATTTATCAGTCAGTACCTGTAGATATCTTATATCCAAAGCAC  734

seq1  AGCAAGACCCTAAATGCAGTTCAGTGAGATTGTTAAATTTTCTTTTAATC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGACCCTAAATGCAGTTCAGTGAGATTGTTAAATTTTCTTTTAATC  784

seq1  AATATCTGATCCACAAATATGAAGGATTTGTGGGTTACTTGCTCCTGAGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTGATCCACAAATATGAAGGATTTGTGGGTTACTTGCTCCTGAGG  834

seq1  AGGCAGCCCAATAGTGGAAGAAAATAATTGAAACATATTTGTTCCATGCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCCCAATAGTGGAAGAAAATAATTGAAACATATTTGTTCCATGCA  884

seq1  ATCAACTGTCACTGAAGAAATGCTGCTTCTTCTTCACTCCCACAACATTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTGTCACTGAAGAAATGCTGCTTCTTCTTCACTCCCACAACATTC  934

seq1  AAATGGCAAATCTGGGCTTTGAACCCAAGCAGACTGTGAGGAGGAACTCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCAAATCTGGGCTTTGAACCCAAGCAGACTGTGAGGAGGAACTCA  984

seq1  GAACACCCACCAGGATGATGTTAGACAAAGCTGGAAAATAAGCCAGGATA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACCCACCAGGATGATGTTAGACAAAGCTGGAAAATAAGCCAGGATA  1034

seq1  GTTATAGCCACTTAGAGACATAGAAGGCATGCCTGAGACATATTACTTAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAGCCACTTAGAGACATAGAAGGCATGCCTGAGACATATTACTTAA  1084

seq1  TGCCAACTAAGGAAACAAGACTTATTTTCCTTCCTCCCTCCAGAAACTAA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACTAAGGAAACAAGACTTATTTTCCTTCCTCCCTCCAGAAACTAA  1134

seq1  GAAGAGTCTTCTCTTTATGTTATATTAGAGGAATTC  1181
      ||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTCTTCTCTTTATGTTATATTAGAGGAATTC  1170


seq1: chr7_62009822_62010954
seq2: B6Ng01-317M14.g_66_1195

seq1  GAATTCTTTATTTGACTGTGATATGCACTTTATATGGGATGTCAACGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATTTGACTGTGATATGCACTTTATATGGGATGTCAACGGAA  50

seq1  TGCTGAATGTTAGACCATCTCTATTTCTTTAATTTAAAATTCAGTCAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAATGTTAGACCATCTCTATTTCTTTAATTTAAAATTCAGTCAAAT  100

seq1  TTCACCAGATCAAAGGCTCTCCGTAGAATTCATCTAGAAGTGAATAGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCAGATCAAAGGCTCTCCGTAGAATTCATCTAGAAGTGAATAGCCT  150

seq1  GAAGCTGACTTGGGGGATTGGTGGATCTTTAACATCAAAATGAAGAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGACTTGGGGGATTGGTGGATCTTTAACATCAAAATGAAGAAGAT  200

seq1  GATAAGATATGATTAGATGGTTTTGCTTCTGTTTTACTTCTATGCTTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGATATGATTAGATGGTTTTGCTTCTGTTTTACTTCTATGCTTCAG  250

seq1  AGTAAATGGAAAATGCTGAGAGCAGTGCCTTAAAGTTCCAAACATGGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATGGAAAATGCTGAGAGCAGTGCCTTAAAGTTCCAAACATGGAAT  300

seq1  TTGTAGAATGTGGTAATAAGAAGCAGAGGAAAATAACACTGTAGAAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAATGTGGTAATAAGAAGCAGAGGAAAATAACACTGTAGAAAGTA  350

seq1  TATCTGGCCCTTTCAATCCAAGGTACGGGATCATAAAGAGTCAAATTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGCCCTTTCAATCCAAGGTACGGGATCATAAAGAGTCAAATTGGA  400

seq1  AGTCATGATAGCTATCACAATATCTCATCAAGATAGCTAAACTTATGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGATAGCTATCACAATATCTCATCAAGATAGCTAAACTTATGTAC  450

seq1  ATAAGTTTTGAGATACACACACAAAAATATTAGTACATATATTTGCCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTTTTGAGATACACACACAAAAATATTAGTACATATATTTGCCTCC  500

seq1  CACCATCTGTAATAAACTATGGGATATCTTGAACTATAACATAAATGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCTGTAATAAACTATGGGATATCTTGAACTATAACATAAATGATT  550

seq1  ATCCACTAATGGATAGTCAGCTTTAAATATCGACCTAATTAAGCTCTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTAATGGATAGTCAGCTTTAAATATCGACCTAATTAAGCTCTTGA  600

seq1  GCTCTTGACAGTTCCTCAGTAACTGGCAGAAAAATGCTATGCCTAGGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGACAGTTCCTCAGTAACTGGCAGAAAAATGCTATGCCTAGGTGA  650

seq1  AGTGGGAAGATGAACCTGGCATCCCCAGCATAACGCCATAGAGGCTCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAAGATGAACCTGGCATCCCCAGCATAACGCCATAGAGGCTCATA  700

seq1  CAAAGAAGAGTGAAGGGTTGGGCCAGGGCTTTTATATCGTCTCAAGTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAGAGTGAAGGGTTGGGCCAGGGCTTTTATATCGTCTCAAGTTTT  750

seq1  AGTCCCAATGATCTCACATTTTGGAAACTGCCATAAATTTTAATACAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCAATGATCTCACATTTTGGAAACTGCCATAAATTTTAATACAGAA  800

seq1  AAATCATAGATCTGCATAACTGTTTATTTCACTTTAATTGTAGAAACATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATAGATCTGCATAACTGTTTATTTCACTTTAATTGTAGAAACATT  850

seq1  ATCATTTTTTATGGTGAGACAGAAGATACATTACCCTGAACATAGGAAAC  900
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATCATTTTTTATGGTGAGACAGAAGATACATTACCCTGAACATAGGGAAC  900

seq1  AGGAACTATAAGCAATAAACAGAAAGTAGAAACTGTGACTTAAATGCAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTATAAGCAATAAACAGAAAGTAGAAACTGTGACTTAAATGCAGG  950

seq1  AAACA-GGAACGATTACCTAAACACAAGAGGTAACAGC-TATGCCTAAAG  998
      ||||| ||||||||||||||||||| |||||||||||| ||||||| |||
seq2  AAACAGGGAACGATTACCTAAACAC-AGAGGTAACAGCTTATGCCT-AAG  998

seq1  CTCAGGAGGTAAGAAATATTCCCCAAACAAAGGAAGTTTAATCTACAAGT  1048
      |||| |||||||||||||||||||||||||| |||||||||||||||   
seq2  CTCA-GAGGTAAGAAATATTCCCCAAACAAA-GAAGTTTAATCTACA--G  1044

seq1  TTAGGAGCATGACCTGTCAATGATGGAAGAGTAATGTTTATCAGA--TTC  1096
      |||||||||||| ||||| ||||||||||||||   |||||||||  |||
seq2  TTAGGAGCATGA-CTGTC-ATGATGGAAGAGTATGTTTTATCAGAATTTC  1092

seq1  -TAG-AACAAGTAATCACCTAG-CTATTTTCCAGGAGAAG  1133
       ||| ||||||| |||| |||| |||||||| ||||||||
seq2  TTAGAAACAAGT-ATCA-CTAGCCTATTTTCAAGGAGAAG  1130


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