BAC Information

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BAC

Clone NameB6Ng01-318A20
Chromosome7 (Build37)
Map Location 37,335,904 - 37,538,099
singlet/doubletdoublet
Overlap geneTshz3
Upstream geneNudt19, Rgs9bp, Ankrd27, Pdcd5, Dpy19l3, zfp507, LOC100043872, EG668988, LOC668507
Downstream geneLOC100043874, Zfp536
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318A20.bB6Ng01-318A20.g
ACCGA108037GA108038
length1,138366
definitionB6Ng01-318A20.b B6Ng01-318A20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,536,962 - 37,538,099)(37,335,904 - 37,336,275)
sequence
gaattcttgcctagcatgcacaagaccctgggctcatccccaacactgca
gcaaaagaaaatgccacaaataatattaagtgaagcctaagccactgggc
acaacagagaatgcactactttaatccatttgtgtaaatttcaaaattag
gcagaattaacttgtggtgttataagccaagtgtgtttgttgcccttagg
gagaaaatagccatgaaagacaaagagactctggactgtcatgtctgagc
cctggtgagatgcattctttcgcccagggaaaatgtatcgacctacacta
acgtgctgtcctgttgttgtgttataatgcaaataaaataaattaatgaa
atttacaaagcaatgtaactcttcaaatgttcacctgggaagatctctga
gacatagtgtggaaaatgaaagaagtctcttctgggggagctctgtgatg
ggtgcccctctggcgaatcccacctggatgtgaacagatcctgcaggtgc
aggatggcatgtgctgttgagagacgactgaggagagaggctcttaccgc
caccattgaaactcacgggccactgagaagcctgagaaaaaccatcagag
tgaatgcatttgcattttagcacctgctgcatgtcaggctctgtacaggg
catgttctacggggaccactgaaggcacagcacccgtgagcatgcggcac
acaaacatacctggggagacaggtttcctgtcctggggggctggatacaa
aggtggaggtgtctgagtagccgcctttgccaggatgccaagaagtccaa
cccatctccatatcctgcctcagtttcccagcgatcctggcattctgggt
gaagatgacacccacagtgataatggacaacagaacaagacaataggcaa
atgctgtgcttaatctccatggaaacaagaggcaggagcctccatctaag
agcctggtcttcaagcttcctaatgctacgaccctttagtacagttcctc
atgttgtggtgaaccaacacaaccattaaattgttttttggtgctacttc
taactataattttgctactaattatggatccatgtgtaccacatctatat
ttctaaatggtctccttgtgaaagggtcattgactccc

actgatgatgtctgagcctgtatggttcaatcatttctcaataatttggt
atggtcagtaagggccaggccttttacacaagcgtcttcagacaagcatt
tcatagccattccaaaccgtgggttggtgagagctggaggctgcagaaca
ccagccttcagccccaggccaggttgccttcaccgtgggagcacagctat
gcctctcaattgtcccatccttcctgactggggtagcaccacttttcaca
aggcaagcaactgagaggaatttggcaaaacccaaaggaataggccagat
ttaagaatgccaaaatgaaaatgcagccgaaaagtaaaaggaaaggaaag
gggaggggaggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_37536962_37538099
seq2: B6Ng01-318A20.b_47_1184 (reverse)

seq1  GGGAGTCAAATGACCTTTCCACAA-GAGACCATTAGGAAATATAGATGT-  48
      ||||||| ||||||| || ||||| |||||||||  ||||||||||||| 
seq2  GGGAGTC-AATGACCCTTTCACAAGGAGACCATTTAGAAATATAGATGTG  49

seq1  GTACACTATGATCCATAA-TAGTAGCAAAATTATAGTTAGAAAGTAGCAC  97
      ||||||   ||||||||| ||||||||||||||||||||| |||||||||
seq2  GTACACATGGATCCATAATTAGTAGCAAAATTATAGTTAG-AAGTAGCAC  98

seq1  C-AAAAACAATTTAATGGTTGGTGTTGGGTTCACCACAACATGAGGAACT  146
      | |||||||||||||||||| ||||| |||||||||||||||||||||||
seq2  CAAAAAACAATTTAATGGTT-GTGTT-GGTTCACCACAACATGAGGAACT  146

seq1  GTACTAAAGGGTCGTAGCATTAGGAAGCTTGAAGACCAGGCTCTTAGATG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAAAGGGTCGTAGCATTAGGAAGCTTGAAGACCAGGCTCTTAGATG  196

seq1  GAGGCTCCTGCCTCTTGTTTCCATGGAGATTAAGCACAGCATTTGCCTAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCCTGCCTCTTGTTTCCATGGAGATTAAGCACAGCATTTGCCTAT  246

seq1  TGTCTTGTTCTGTTGTCCATTATCACTGTGGGTGTCATCTTCACCCAGAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGTTCTGTTGTCCATTATCACTGTGGGTGTCATCTTCACCCAGAA  296

seq1  TGCCAGGATCGCTGGGAAACTGAGGCAGGATATGGAGATGGGTTGGACTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGATCGCTGGGAAACTGAGGCAGGATATGGAGATGGGTTGGACTT  346

seq1  CTTGGCATCCTGGCAAAGGCGGCTACTCAGACACCTCCACCTTTGTATCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCATCCTGGCAAAGGCGGCTACTCAGACACCTCCACCTTTGTATCC  396

seq1  AGCCCCCCAGGACAGGAAACCTGTCTCCCCAGGTATGTTTGTGTGCCGCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCCCAGGACAGGAAACCTGTCTCCCCAGGTATGTTTGTGTGCCGCA  446

seq1  TGCTCACGGGTGCTGTGCCTTCAGTGGTCCCCGTAGAACATGCCCTGTAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCACGGGTGCTGTGCCTTCAGTGGTCCCCGTAGAACATGCCCTGTAC  496

seq1  AGAGCCTGACATGCAGCAGGTGCTAAAATGCAAATGCATTCACTCTGATG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTGACATGCAGCAGGTGCTAAAATGCAAATGCATTCACTCTGATG  546

seq1  GTTTTTCTCAGGCTTCTCAGTGGCCCGTGAGTTTCAATGGTGGCGGTAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCTCAGGCTTCTCAGTGGCCCGTGAGTTTCAATGGTGGCGGTAAG  596

seq1  AGCCTCTCTCCTCAGTCGTCTCTCAACAGCACATGCCATCCTGCACCTGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTCTCCTCAGTCGTCTCTCAACAGCACATGCCATCCTGCACCTGC  646

seq1  AGGATCTGTTCACATCCAGGTGGGATTCGCCAGAGGGGCACCCATCACAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTGTTCACATCCAGGTGGGATTCGCCAGAGGGGCACCCATCACAG  696

seq1  AGCTCCCCCAGAAGAGACTTCTTTCATTTTCCACACTATGTCTCAGAGAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCCCCAGAAGAGACTTCTTTCATTTTCCACACTATGTCTCAGAGAT  746

seq1  CTTCCCAGGTGAACATTTGAAGAGTTACATTGCTTTGTAAATTTCATTAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAGGTGAACATTTGAAGAGTTACATTGCTTTGTAAATTTCATTAA  796

seq1  TTTATTTTATTTGCATTATAACACAACAACAGGACAGCACGTTAGTGTAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTATTTGCATTATAACACAACAACAGGACAGCACGTTAGTGTAG  846

seq1  GTCGATACATTTTCCCTGGGCGAAAGAATGCATCTCACCAGGGCTCAGAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGATACATTTTCCCTGGGCGAAAGAATGCATCTCACCAGGGCTCAGAC  896

seq1  ATGACAGTCCAGAGTCTCTTTGTCTTTCATGGCTATTTTCTCCCTAAGGG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGTCCAGAGTCTCTTTGTCTTTCATGGCTATTTTCTCCCTAAGGG  946

seq1  CAACAAACACACTTGGCTTATAACACCACAAGTTAATTCTGCCTAATTTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAACACACTTGGCTTATAACACCACAAGTTAATTCTGCCTAATTTT  996

seq1  GAAATTTACACAAATGGATTAAAGTAGTGCATTCTCTGTTGTGCCCAGTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTACACAAATGGATTAAAGTAGTGCATTCTCTGTTGTGCCCAGTG  1046

seq1  GCTTAGGCTTCACTTAATATTATTTGTGGCATTTTCTTTTGCTGCAGTGT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGGCTTCACTTAATATTATTTGTGGCATTTTCTTTTGCTGCAGTGT  1096

seq1  TGGGGATGAGCCCAGGGTCTTGTGCATGCTAGGCAAGAATTC  1138
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATGAGCCCAGGGTCTTGTGCATGCTAGGCAAGAATTC  1138


seq1: chr7_37335904_37336275
seq2: B6Ng01-318A20.g_67_438

seq1  GAATTCACTGATGATGTCTGAGCCTGTATGGTTCAATCATTTCTCAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGATGATGTCTGAGCCTGTATGGTTCAATCATTTCTCAATAA  50

seq1  TTTGGTATGGTCAGTAAGGGCCAGGCCTTTTACACAAGCGTCTTCAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTATGGTCAGTAAGGGCCAGGCCTTTTACACAAGCGTCTTCAGACA  100

seq1  AGCATTTCATAGCCATTCCAAACCGTGGGTTGGTGAGAGCTGGAGGCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTCATAGCCATTCCAAACCGTGGGTTGGTGAGAGCTGGAGGCTGC  150

seq1  AGAACACCAGCCTTCAGCCCCAGGCCAGGTTGCCTTCACCGTGGGAGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACCAGCCTTCAGCCCCAGGCCAGGTTGCCTTCACCGTGGGAGCAC  200

seq1  AGCTATGCCTCTCAATTGTCCCATCCTTCCTGACTGGGGTAGCACCACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGCCTCTCAATTGTCCCATCCTTCCTGACTGGGGTAGCACCACTT  250

seq1  TTCACAAGGCAAGCAACTGAGAGGAATTTGGCAAAACCCAAAGGAATAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAGGCAAGCAACTGAGAGGAATTTGGCAAAACCCAAAGGAATAGG  300

seq1  CCAGATTTAAGAATGCCAAAATGAAAATGCAGCCGAAAAGTAAAAGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTTAAGAATGCCAAAATGAAAATGCAGCCGAAAAGTAAAAGGAAA  350

seq1  GGAAAGGGGAGGGGAGGGGAGG  372
      ||||||||||||||||||||||
seq2  GGAAAGGGGAGGGGAGGGGAGG  372


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