BAC Information

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BAC

Clone NameB6Ng01-318D06
Chromosome7 (Build37)
Map Location 130,717,004 - 130,718,077
singlet/doubletsinglet
Overlap genenone
Upstream genePrkcb1, Cacng3, 4930413G21Rik, Rbbp6, LOC628696, LOC100042977, LOC100042981, Tnrc6a, Slc5a11, Arhgap17, Lcmt1, Aqp8, Zkscan2, LOC100043482
Downstream geneEG628779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318D06.bB6Ng01-318D06.g
ACCGA108152GA108153
length1,1711,076
definitionB6Ng01-318D06.b B6Ng01-318D06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacataataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggttgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcaacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagggaactcctaaacc
tgataaacagctttggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtaaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaaatggaaagatctcccatgc
tcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaagc
aatctacagattcaatgcaatccccatcaaaattccaactcaattcttca
acgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacct
aggatagcaaaaagtcttctcaagtataaaagaacctctggtggaatcac
catgcctgacctaaagctttactacagggcaattgtgataaaaactgcat
ggtactggtatagagacagacaagtagaccaatggaatagaattgaagac
ccagaaatgaacccacacacctatggtcacttgatcttcgacaagggagc
taaaaccatccagtgggaagaaagacagcattttcaacaattgggtgctg
gcacaactgggttgttatcatgtagaagaatgcgaatcgatccattactt
atctcattgtactaagtcaaatctaaggtggatcaaggacttcacataaa
accagagacacttgaaactatagagagaaggtggggaaagctggagattg
gctaacagggggtaaaaatctgaaccagacaggccattggcttgggctct
tgtaagagaagtccgggaaaa
gaattctgtctgtcttaaacatgagagtgagtatgtctgctgtggcaaga
atggagtgtgtatgtaggttattcaagttgctgtttaatgctcttttagc
catacagtttaaaaggatttaaaaatataaggaatgaacgagacccctgg
actatagaaagttgccacttaagctgaagtccagaggtgctcaggagtct
aatgcaaatcaagagaggaaaggggaggctgcaaactcttgggtgaatat
aaaactaagccctaagagtgggagtaaaatgcacgcttttcaatagaggt
gtcaccaagtaccttctctcctcacactttgacaagctcccctttctgtg
ggagtgatgagggtgggagaccaggagacagtgctccagactgacagtgt
cagtcacatgcctcttgttcaaagcactgagatgttttcaaccacaaagg
ggggaaaaacccttcaacttttcttatttcatccaagctgggttgtctgt
ccctttgcggttgctatgacaacagcagctctcctccttcttcatttgga
tctatttccgaaggaagaacaatgaatgcaaaagatcagaaaatgggaaa
ggcaagtaggcattaaaggcattagaattatttaccctggagaggagaat
gctaagaggtggcaattatattgttctgggctattaaaggttactactac
agaagtcgttccctgcttgggcccaagataaaatcagatttatggtaact
gtcggaaaatagctttagggagaaaaagtccctgatgcaaagttctcagg
gtctctttgcctctgttgggggacagaatgggaggcatctgaaaataggt
gttctgcacaagttattctcctccaaagtccttagcccagtgagacagta
gcacacacaaaaaaataaacacacaggcatgcatgagtgcacaacagaga
aacacacacacacacacacacacacacacacacccacacacacacagagc
ttcttctttgtcagtatagtagtttgttgtgtacatggtgttgtatatgt
gagtgtatgtggagtggatatgtgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_130717004_130718077
seq2: B6Ng01-318D06.g_66_1141

seq1  GAATTCTGTCTGTCTTAAACATGAGAGTGAGTATGTCTGCTGTGGCAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCTGTCTTAAACATGAGAGTGAGTATGTCTGCTGTGGCAAGA  50

seq1  ATGGAGTGTGTATGTAGGTTATTCAAGTTGCTGTTTAATGCTCTTTTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGTGTGTATGTAGGTTATTCAAGTTGCTGTTTAATGCTCTTTTAGC  100

seq1  CATACAGTTTAAAAGGATTTAAAAATATAAGGAATGAACGAGACCCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGTTTAAAAGGATTTAAAAATATAAGGAATGAACGAGACCCCTGG  150

seq1  ACTATAGAAAGTTGCCACTTAAGCTGAAGTCCAGAGGTGCTCAGGAGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAGAAAGTTGCCACTTAAGCTGAAGTCCAGAGGTGCTCAGGAGTCT  200

seq1  AATGCAAATCAAGAGAGGAAAGGGGAGGCTGCAAACTCTTGGGTGAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAATCAAGAGAGGAAAGGGGAGGCTGCAAACTCTTGGGTGAATAT  250

seq1  AAAACTAAGCCCTAAGAGTGGGAGTAAAATGCACGCTTTTCAATAGAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAAGCCCTAAGAGTGGGAGTAAAATGCACGCTTTTCAATAGAGGT  300

seq1  GTCACCAAGTACCTTCTCTCCTCACACTTTGACAAGCTCCCCTTTCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCAAGTACCTTCTCTCCTCACACTTTGACAAGCTCCCCTTTCTGTG  350

seq1  GGAGTGATGAGGGTGGGAGACCAGGAGACAGTGCTCCAGACTGACAGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGATGAGGGTGGGAGACCAGGAGACAGTGCTCCAGACTGACAGTGT  400

seq1  CAGTCACATGCCTCTTGTTCAAAGCACTGAGATGTTTTCAACCACAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACATGCCTCTTGTTCAAAGCACTGAGATGTTTTCAACCACAAAGG  450

seq1  GGGGAAAAACCCTTCAACTTTTCTTATTTCATCCAAGCTGGGTTGTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAAACCCTTCAACTTTTCTTATTTCATCCAAGCTGGGTTGTCTGT  500

seq1  CCCTTTGCGGTTGCTATGACAACAGCAGCTCTCCTCCTTCTTCATTTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGCGGTTGCTATGACAACAGCAGCTCTCCTCCTTCTTCATTTGGA  550

seq1  TCTATTTCCGAAGGAAGAACAATGAATGCAAAAGATCAGAAAATGGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTCCGAAGGAAGAACAATGAATGCAAAAGATCAGAAAATGGGAAA  600

seq1  GGCAAGTAGGCATTAAAGGCATTAGAATTATTTACCCTGGAGAGGAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTAGGCATTAAAGGCATTAGAATTATTTACCCTGGAGAGGAGAAT  650

seq1  GCTAAGAGGTGGCAATTATATTGTTCTGGGCTATTAAAGGTTACTACTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAGGTGGCAATTATATTGTTCTGGGCTATTAAAGGTTACTACTAC  700

seq1  AGAAGTCGTTCCCTGCTTGGGCCCAAGATAAAATCAGATTTATGGTAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCGTTCCCTGCTTGGGCCCAAGATAAAATCAGATTTATGGTAACT  750

seq1  GTCGGAAAATAGCTTTAGGGAGAAAAAGTCCCTGATGCAAAGTTCTCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGGAAAATAGCTTTAGGGAGAAAAAGTCCCTGATGCAAAGTTCTCAGG  800

seq1  GTCTCTTTGCCTCTGTTGGGGGACAGAATGGGAGGCATCTGAAAATAGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTTGCCTCTGTTGGGGGACAGAATGGGAGGCATCTGAAAATAGGT  850

seq1  GTTCTGCACAAGTTATTCTCCTCCAAAAGTCCTTAG-CCAGTGAGACAGT  899
      |||||||||||||||||||||||| ||||||||||| |||||||||||||
seq2  GTTCTGCACAAGTTATTCTCCTCC-AAAGTCCTTAGCCCAGTGAGACAGT  899

seq1  AGCAACACAC-AAAAAATAAACACACAGGCATGCATGAGTGCACAAACAG  948
      ||| |||||| ||||||||||||||||||||||||||||||||| |||||
seq2  AGC-ACACACAAAAAAATAAACACACAGGCATGCATGAGTGCAC-AACAG  947

seq1  AGAAAACACACACACACACACACACACACACACACACACACACACACACA  998
      || |||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AG-AAACACACACACACACACACACACACACACACACCCACACACACACA  996

seq1  GAGCTTC-TCTTTGTCAAGTATTAAGTAGTTTG-TGTGTACAT-GTG-TG  1044
      ||||||| |||||||| |||||  ||||||||| ||||||||| ||| ||
seq2  GAGCTTCTTCTTTGTC-AGTAT--AGTAGTTTGTTGTGTACATGGTGTTG  1043

seq1  TATATGTGAGTGTATGT-GAGTG--TATGTGAG  1074
      ||||||||||||||||| |||||  ||||||||
seq2  TATATGTGAGTGTATGTGGAGTGGATATGTGAG  1076