BAC Information

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BAC

Clone NameB6Ng01-318J04
Chromosome7 (Build37)
Map Location 111,003,861 - 111,005,017
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y
Downstream geneOlfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318J04.bB6Ng01-318J04.g
ACCGA108427GA108428
length1,1531,156
definitionB6Ng01-318J04.b B6Ng01-318J04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatgctgtgctaattttagatgttattagtatagaaatttttga
agtatactgtttgtagtaaattaggcccttaaacacaagtttttcagtgt
taaacaagaaaaaaatagtctctacagttgttcttcatcataaatagttt
taaattagaaaaattgtgagtgaagtttctgaacaggaaaaacatgtttt
gtaattttattaaaagaaatggtcactactctgcttccattttatgtctc
cattcatattcccagaacagcaataaattagatagagtaagtttcttagg
tgttgcattaactaggaatgactacatactaatgacagcaaggtggaatc
cctgcaggaagccctaaaccttcaaggaacatgcaatggaaaatgtcaaa
gacactgaatgcatcagcctcatgatttgaagatgagttaaagagagagc
catgtctttcttagctagaaatccctcccttttcagttcagagcagacac
ctgtttgactgacctctggggctatactgaaaaaccagagaagtgtctgg
cacttaattatcacgagagtttttactaggaagagaaaatagaaaaccat
agtcagccaggtattctcttgaaactggtaacctggaacaaagtcataag
tgccctattttctcccataacatcacttctctttcttggtttctttggca
ttttttaaaatgcttttaaaatgttaacattattgctacattgatgtgta
gaagtgtaaaacatttaaacaggttctccaaagcagcaaatatatatata
tttatattcccatctaaggcaggctacttgggtacttgatcagaaaggaa
acagatgagtcactggtctaagactactccattttttgttaagctataat
ttattgtcattatctaaattcaaacaaaacaagcccagactgtttattaa
ccctattttttactttttcattggcagaaagctctcatacctttctaggt
aaaacaagtttctgcattttacaatatcctatattagctacctatgatct
atttatccatcctccatgccattctttacttgggtctagaagtaataaat
ggtctatttcaggattaatctaagagaactctatcttttaaggctcaaat
aag
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaaaagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctctcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgttgccgcctcagaagctctgtggctcttgccgggaaggtggc
tggttgtctggagctgaagatggtgccgccccagaatctctgtgactctc
tcgcccgtcccagaaacggctggcactctgtattccacacggtcacccgt
gcagcctgccctccgcggagtcccggagccaagaaggctcccgccggcgc
ctgtgccacaaacctctcaggccaggcagacccccgtgctctcaccagga
aggtggccggctgtctggagctgaagatggcgccgcccagaagctctgcg
actctctcgcccgtcccagaaacggctggcactctgtattccacacggtc
acccgtgcagcctgccctccgcggagtcccggagccaagaaggctcccgc
cggcgcctgtgccacaaccctctcaggccaggcagacccccgtgctctca
ccaggaagtggccggctgtctggagctgagatggcgccgcccagaagctc
tgcgactctctcgcccgtcccagaaacggcttgccacttctgtatttcca
cacggttcacccgtgcaggccttgcccttccgcgtagtccccggagtcag
gtagcttccgcctgcgcccttgttgcccaaccttcttcaggccaagctga
ccccatggctctccacaagatgttgcagcctgttcctgtggagacctgta
gagatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_111003861_111005017
seq2: B6Ng01-318J04.b_49_1201

seq1  GAATTCAATGCTGTGCTAATTTTAGATGTTATTAGTATAGAAATTTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCTGTGCTAATTTTAGATGTTATTAGTATAGAAATTTTTGA  50

seq1  AGTATACTGTTTGTAGTAAATTAGGCCCTTAAACACAAGTTTTTCAGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATACTGTTTGTAGTAAATTAGGCCCTTAAACACAAGTTTTTCAGTGT  100

seq1  TAAACAAGAAAAAAATAGTCTCTACAGTTGTTCTTCATCATAAATAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAGAAAAAAATAGTCTCTACAGTTGTTCTTCATCATAAATAGTTT  150

seq1  TAAATTAGAAAAATTGTGAGTGAAGTTTCTGAACAGGAAAAACATGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAGAAAAATTGTGAGTGAAGTTTCTGAACAGGAAAAACATGTTTT  200

seq1  GTAATTTTATTAAAAGAAATGGTCACTACTCTGCTTCCATTTTATGTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTTATTAAAAGAAATGGTCACTACTCTGCTTCCATTTTATGTCTC  250

seq1  CATTCATATTCCCAGAACAGCAATAAATTAGATAGAGTAAGTTTCTTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATATTCCCAGAACAGCAATAAATTAGATAGAGTAAGTTTCTTAGG  300

seq1  TGTTGCATTAACTAGGAATGACTACATACTAATGACAGCAAGGTGGAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCATTAACTAGGAATGACTACATACTAATGACAGCAAGGTGGAATC  350

seq1  CCTGCAGGAAGCCCTAAACCTTCAAGGAACATGCAATGGAAAATGTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGGAAGCCCTAAACCTTCAAGGAACATGCAATGGAAAATGTCAAA  400

seq1  GACACTGAATGCATCAGCCTCATGATTTGAAGATGAGTTAAAGAGAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGAATGCATCAGCCTCATGATTTGAAGATGAGTTAAAGAGAGAGC  450

seq1  CATGTCTTTCTTAGCTAGAAATCCCTCCCTTTTCAGTTCAGAGCAGACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTTTCTTAGCTAGAAATCCCTCCCTTTTCAGTTCAGAGCAGACAC  500

seq1  CTGTTTGACTGACCTCTGGGGCTATACTGAAAAACCAGAGAAGTGTCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGACTGACCTCTGGGGCTATACTGAAAAACCAGAGAAGTGTCTGG  550

seq1  CACTTAATTATCACGAGAGTTTTTACTAGGAAGAGAAAATAGAAAACCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAATTATCACGAGAGTTTTTACTAGGAAGAGAAAATAGAAAACCAT  600

seq1  AGTCAGCCAGGTATTCTCTTGAAACTGGTAACCTGGAACAAAGTCATAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCCAGGTATTCTCTTGAAACTGGTAACCTGGAACAAAGTCATAAG  650

seq1  TGCCCTATTTTCTCCCATAACATCACTTCTCTTTCTTGGTTTCTTTGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTATTTTCTCCCATAACATCACTTCTCTTTCTTGGTTTCTTTGGCA  700

seq1  TTTTTTAAAATGCTTTTAAAATGTTAACATTATTGCTACATTGATGTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAAATGCTTTTAAAATGTTAACATTATTGCTACATTGATGTGTA  750

seq1  GAAGTGTAAAACATTTAAACAGGTTCTCCAAAGCAGCAAATATATATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTAAAACATTTAAACAGGTTCTCCAAAGCAGCAAATATATATATA  800

seq1  TTTATATTCCCATCTAAGGCAGGCTACTTGGGTACTTGATCAG-AAGGAA  849
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTTATATTCCCATCTAAGGCAGGCTACTTGGGTACTTGATCAGAAAGGAA  850

seq1  ACAGATGAGTCACTGGTCTAAGACTACTCCA-TTTTTGTTAAGCTATAAT  898
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACAGATGAGTCACTGGTCTAAGACTACTCCATTTTTTGTTAAGCTATAAT  900

seq1  TTATTGTCATTATCTAAATTCAAACAAAACAAG-CCAGACTGTTTATTAA  947
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTATTGTCATTATCTAAATTCAAACAAAACAAGCCCAGACTGTTTATTAA  950

seq1  CCCTA-TTTTTACTTTTTCATTGGCAGAAAGCTCTCATACC-TTCTAGGT  995
      ||||| ||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCCTATTTTTTACTTTTTCATTGGCAGAAAGCTCTCATACCTTTCTAGGT  1000

seq1  AAAACAAGTTTCTGCATTTTTACAATATCCTATAATAGCTTACCCTATGA  1045
      |||||||||||||||| ||||||||||||||||| |||||   |||||||
seq2  AAAACAAGTTTCTGCA-TTTTACAATATCCTATATTAGCT--ACCTATGA  1047

seq1  TCTATTTAT-CAT-CTCCATGGCATTCTTTTTTAACTTGGGTCCTAGAGT  1093
      ||||||||| ||| ||||||| ||||||||    |||||||| |||||  
seq2  TCTATTTATCCATCCTCCATGCCATTCTTT----ACTTGGGT-CTAGAAG  1092

seq1  AAATAAATTGTCTATTTTCAGGATTAAAATTCT-AGAGAACTCTTATCTT  1142
       ||||||| ||||| ||||||||||||   ||| ||||||||| ||||||
seq2  TAATAAATGGTCTA-TTTCAGGATTAA---TCTAAGAGAACTC-TATCTT  1137

seq1  TTTATG-TTAAATAAG  1157
      || | | | |||||||
seq2  TTAAGGCTCAAATAAG  1153