BAC Information

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BAC

Clone NameB6Ng01-318O07
Chromosome7 (Build37)
Map Location 79,200,893 - 79,202,042
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665535
Downstream geneMctp2, LOC100042873, LOC100042880, LOC233391, LOC665570, LOC100042029, EG384643
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318O07.bB6Ng01-318O07.g
ACCGA108667GA108668
length7771,134
definitionB6Ng01-318O07.b B6Ng01-318O07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgaaattcttagacaaatggatggatctgaaggatatcatcct
gagtgaggtaacccaatcacaaaagaacacacatgatatgcactcactga
taagtggatattagcccagaagctcagaatacccaagatacaatttgcaa
aacacatgaaactcaagaagaaggaagaccaaagtgtggatacatagatc
cttcttagaaggggggaacaaaatacccatggaaggagttacagagacaa
agtttctagcagagactgaaggaatgttcatccagaaactgccccacctg
gggatctatgccataaacaaccaccaaacccagacaccaacagttgcaga
tgccaataagagcttgctgacaggagcctgatatagctggctcctgaaag
gctctgccattgcctgactaatacagaagtggatgcacacagccatccat
tagatggagcatagggtccccaatgaaggagctagagaaagtacccaagg
tgctgaaggggtttgtagccccctaggaggaacaacaatatgaactaacc
agtacccccagagctccctgggactaaaccaccaatcaaagagaatacac
agagggactcatggctatactttcatatgtagtagagcatggcctagtca
gtcatcaatgagaggagaggtccttggtcctgtgatggttctgtgcccca
gtatggggaaatgcttgggccaggaagcaggagtgagtgggttggggagc
agcagcatggggagggggaagaggata

gaattctatgcatttatcatggatgtagattttggtttatggcataaaag
tgaaaaaaatgaaaagtagcgtaagtaaaatcaaatacattatggtaaat
taaaagggaaaaactaattttaaaaataaacaaatgagataattcaaccc
aaatactctaagcactggaaacaatcaaaggtaaactgcaactcagggaa
gtaagtggaagactttgtaaattgtatgttcactaaggtgtcaatactta
aatatatgagggatttgtgatatttactcttcaatgctgatttgacttag
atttaggatcaaataggagaaatatattggtatggctatgagagagtttt
cagagaagcttaactaagagagataactgtcagtagagcatcatcccata
ggatggaatcttggacctgataaagataggaaaggaagaagagaggcagg
caatagtactcaacgtggttgagaacatcaagtgatcaattgctcaggct
gatgcttccttgccttccctctatgatggattgtgaccccataaaccctt
aatcataatctacccatccctctttaacttggttttgtctcagaaatatg
aaaataacaaatacagacaatcactcagggaaatgaaagggggaaaaaaa
aaaagaaaaagaacccaggttcaaaaaaaaaatgggaaagggacttgaag
atacatgttccaaatgaacatatacaagtttctattatccagaatcaaga
ataatcagagaaatgcaagtcaatatcgaaatgaggttatcagttggtac
ttacagaaaggaattgtgaaaaaaaaatcaaaagttactaagcaatgtgt
gcttacaaagaaaggggaactcttccccatcaactgtggtatgaaaatgg
gacagtcactgtggaaaatggcatacgggcttgtcaaggaggtaaaagta
gctcccgcctaggatacaggaatctagtccacagtgtaaaacaagagtac
tgtttttccatgttctttacagctgtatagtacgagtcaatggtgagagc
tatgagttatggcattggtaagatgctacagaataagaacctggagtacc
cctctatacattgaaagtagaagcaaagcaatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_79200893_79202042
seq2: B6Ng01-318O07.g_70_1203 (reverse)

seq1  ATATTGCTTTGCTTTTCTTCCTTTTTAAAATGTATAGAGGGGGTTAACTC  50
      ||||||||||||||      ||  ||  ||||||||||||||    ||||
seq2  ATATTGCTTTGCTT------CTACTTTCAATGTATAGAGGGG---TACTC  41

seq1  CAAGGTCTTATTCCTGTTAACCATCCTTTACCACTGCAATAAACTCATAG  100
      || | ||||||| ||||  | ||||  |||||| ||| || |||||||||
seq2  CAGGTTCTTATT-CTGT--AGCATC--TTACCAATGCCAT-AACTCATAG  85

seq1  CCTCTTCACATTTGACTCGTACTAATACAGCTGTAAAGAACATGG-AAAA  149
       ||| ||||  |||||||||||| ||||||||||||||||||||| ||||
seq2  -CTC-TCACCATTGACTCGTACT-ATACAGCTGTAAAGAACATGGAAAAA  132

seq1  CAGTTACTCTTGTTTTACACTGT-GACTAGATTCCTGTATCCTAGGCGGG  198
      ||| ||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAG-TACTCTTGTTTTACACTGTGGACTAGATTCCTGTATCCTAGGCGGG  181

seq1  AGCTACTTTTACCTCCTTGACAAGCCCGTATGCCATTTTCCACAGTGACT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACTTTTACCTCCTTGACAAGCCCGTATGCCATTTTCCACAGTGACT  231

seq1  GT-CCATTTTCATACCACAGTTGATGGGGAAGAGTTCCCCTTTCTTTGTA  297
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATTTTCATACCACAGTTGATGGGGAAGAGTTCCCCTTTCTTTGTA  281

seq1  AGCACACATTGCTTAGTAACTTTTGATTTTTTTTTCACAATTCCTTTCTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACATTGCTTAGTAACTTTTGATTTTTTTTTCACAATTCCTTTCTG  331

seq1  TAAGTACCAACTGATAACCTCATTTCGATATTGACTTGCATTTCTCTGAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTACCAACTGATAACCTCATTTCGATATTGACTTGCATTTCTCTGAT  381

seq1  TATTCTTGATTCTGGATAATAGAAACTTGTATATGTTCATTTGGAACATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTGATTCTGGATAATAGAAACTTGTATATGTTCATTTGGAACATG  431

seq1  TATCTTCAAGTCCCTTTCCCATTTTTTTTTTGAACCTGGGTTCTTTTTCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCAAGTCCCTTTCCCATTTTTTTTTTGAACCTGGGTTCTTTTTCT  481

seq1  TTTTTTTTTTCCCCCTTTCATTTCCCTGAGTGATTGTCTGTATTTGTTAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTCCCCCTTTCATTTCCCTGAGTGATTGTCTGTATTTGTTAT  531

seq1  TTTCATATTTCTGAGACAAAACCAAGTTAAAGAGGGATGGGTAGATTATG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATATTTCTGAGACAAAACCAAGTTAAAGAGGGATGGGTAGATTATG  581

seq1  ATTAAGGGTTTATGGGGTCACAATCCATCATAGAGGGAAGGCAAGGAAGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGGGTTTATGGGGTCACAATCCATCATAGAGGGAAGGCAAGGAAGC  631

seq1  ATCAGCCTGAGCAATTGATCACTTGATGTTCTCAACCACGTTGAGTACTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCCTGAGCAATTGATCACTTGATGTTCTCAACCACGTTGAGTACTA  681

seq1  TTGCCTGCCTCTCTTCTTCCTTTCCTATCTTTATCAGGTCCAAGATTCCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGCCTCTCTTCTTCCTTTCCTATCTTTATCAGGTCCAAGATTCCA  731

seq1  TCCTATGGGATGATGCTCTACTGACAGTTATCTCTCTTAGTTAAGCTTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGGGATGATGCTCTACTGACAGTTATCTCTCTTAGTTAAGCTTCT  781

seq1  CTGAAAACTCTCTCATAGCCATACCAATATATTTCTCCTATTTGATCCTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAACTCTCTCATAGCCATACCAATATATTTCTCCTATTTGATCCTA  831

seq1  AATCTAAGTCAAATCAGCATTGAAGAGTAAATATCACAAATCCCTCATAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAGTCAAATCAGCATTGAAGAGTAAATATCACAAATCCCTCATAT  881

seq1  ATTTAAGTATTGACACCTTAGTGAACATACAATTTACAAAGTCTTCCACT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGTATTGACACCTTAGTGAACATACAATTTACAAAGTCTTCCACT  931

seq1  TACTTCCCTGAGTTGCAGTTTACCTTTGATTGTTTCCAGTGCTTAGAGTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCCTGAGTTGCAGTTTACCTTTGATTGTTTCCAGTGCTTAGAGTA  981

seq1  TTTGGGTTGAATTATCTCATTTGTTTATTTTTAAAATTAGTTTTTCCCTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTTGAATTATCTCATTTGTTTATTTTTAAAATTAGTTTTTCCCTT  1031

seq1  TTAATTTACCATAATGTATTTGATTTTACTTACGCTACTTTTCATTTTTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTACCATAATGTATTTGATTTTACTTACGCTACTTTTCATTTTTT  1081

seq1  TCACTTTTATGCCATAAACCAAAATCTACATCCATGATAAATGCATAGAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTTATGCCATAAACCAAAATCTACATCCATGATAAATGCATAGAA  1131

seq1  TTC  1150
      |||
seq2  TTC  1134


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