BAC Information

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BAC

Clone NameB6Ng01-319C24
Chromosome7 (Build37)
Map Location 117,414,083 - 117,558,752
singlet/doubletdoublet
Overlap geneSwap70, EG668368, Sbf2
Upstream geneStk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1, Tmem41b, Ipo7, AA474408, Zfp143, Wee1
Downstream geneLOC668246, Adm, B430319F04Rik, Ampd3, Rnf141, Xlkd1, Mrvi1, Ctr9, Eif4g2, LOC100043221, LOC100042658, LOC384658
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319C24.bB6Ng01-319C24.g
ACCGA108883GA108884
length1,131882
definitionB6Ng01-319C24.b B6Ng01-319C24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,557,614 - 117,558,752)(117,414,083 - 117,414,962)
sequence
gaattcaatagcaggctagacatctgtgttgatattttaagaaagaaaca
aaaactaaatgaactaaattttagttagtgattcaaacacttagtaatgt
ttcctttcatgacctagaaattagtctctttcttgccctcaagggaaaac
caaagggaacatgagtactgccaaacaactgctttgtttatcgggctctt
tcaaagccaatataattttgtcacagcactgttttatacagggtataatt
acttcctacataacatctcatttcaaaagatggatcatattttttcaaaa
caagggttataaaaaaatcatgacttgaacctctctttaaaattttttat
tatgtctagaatctaactactgtgttttaacaataaattttgacttgaaa
acccactgaagttctctacttctctcattatgttaaacttcattctatga
ggagcccactcatcaacacagaaaagtaccttagaaaattccaaataaac
ataaatgacgattttgatacacaattcctcttatgaagtagagatctcca
aatacatttccctgtacgcttaagaaagaacaagtagacaagccaaacac
taaacatcagcaggttttaaagtctctttttaaaagatttattattatgt
tcattagcgttttgcctacatgtatgtctgtgtgaaggtgccagatcccc
tggaactggcgttacagacagtaagctgccaaatggacactgggaattga
actatgtcctctggaggaggtcctcttaatcactaagccatctctccagc
gcctgcatcagcaggttttgtgactacacttacacattgatctctataag
attggagagctggttaaagctggaaattttacattgcaatagaaacactg
agaatacgaggtcatccccacttaggagcatgcttacactctgccttatg
gccttaggagacgcaattatatatcctttaaatacacacacacacacaca
cacatcaatatacatcctttaaaatacgcgcaacacacacacaaccacac
acacagcagcacacaccaatatacatctttaaaatacggcaaacaaacaa
cacacattatacattcgtgaaatacaacact
gaattccagtttgtgacaatgactagtcatgtgtttctgaggggaactaa
cttgctgtggcgtttgctggaggttcttatgtcttgctgctctcaacgtc
tctttgtggttttactgtggtgttgcgactgccgctgtccttgttttacg
gcagggcctcagtatgcagctttggctggcccaaagcttcctgtgtagac
cacactgacctctaactcagaaatcagctctgcctgggaggaatgatgag
gccaccatgtctggcactgtctttgtttttttttttttatctgtttagaa
tttatagaatgtggaccaaggttttccattatgttgggtaaaatttccat
gtatttcttcaagtatttttgctccctttttacttgttccacatgctgtt
gaacagaatattgtgtgtaacagtcaccagattctctgatgctgtttatt
tttcttgtttttctgtccttctgactgtataatttctgtgtatctcttta
gtagcccaaagagattgttgagcccctctagttgattcttttttgaaata
agatcttgaagtcctggctagccttcaactctctacatagggaagttggc
cttgaacgtctgctcttcctcttgcagcttccagttcaggagtcctaggt
gtgctccagcacaccacgccctggcttcctaatgctgtgcacgctgtgca
cggcgtgcacaccgtcctctagaagacttactcttcagtcggttcttgaa
cattgcagctcatcattctccatttggttcttttatattagcctctttgg
cccttggtcttgggaagattatatgcccagtacaggggaacgccagggcc
aggaagcgggagtggggtgggttgggggagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_117557614_117558752
seq2: B6Ng01-319C24.b_45_1175 (reverse)

seq1  AGTGTGTGTATTTTAAAGGATGTATAATTGGTGTGTGTGTGTGTGTG-CG  49
      ||||| |||| ||| | | |||||||||  |||||| ||| ||| || ||
seq2  AGTGT-TGTA-TTTCACGAATGTATAAT--GTGTGT-TGTTTGTTTGCCG  45

seq1  TATTTTAAAGGATGTATAATTGGTGTGTG-TG-TGTGTGTGTGTGTGTGT  97
      ||||||||| ||||||| ||||||||||| || ||||||||||  |||||
seq2  TATTTTAAA-GATGTAT-ATTGGTGTGTGCTGCTGTGTGTGTGGTTGTGT  93

seq1  GTGTGTGTGCGCGTATTTTAAAGGATGTATAATTGGTGTGTGTGTGTGTG  147
      |||||| ||||||||||||||||||||||| |||| ||||||||||||||
seq2  GTGTGT-TGCGCGTATTTTAAAGGATGTAT-ATTGATGTGTGTGTGTGTG  141

seq1  TGTGTGTATTTTAAAGGATATATAATTGCGTCTCCTTAAGGCCATAAGGC  197
      |||||||| |||||||||||||||||||||||||| ||||||||||||||
seq2  TGTGTGTA-TTTAAAGGATATATAATTGCGTCTCC-TAAGGCCATAAGGC  189

seq1  AGAGTGTAAGCATGCTCCTAAGTGGGGATGACCTCGTATTCTCAGTGTTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTAAGCATGCTCCTAAGTGGGGATGACCTCGTATTCTCAGTGTTT  239

seq1  CTATTGCAATGTAAAATTTCCAGCTTTAACCAGCTCTCCAATCTTATAGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGCAATGTAAAATTTCCAGCTTTAACCAGCTCTCCAATCTTATAGA  289

seq1  GATCAATGTGTAAGTGTAGTCACAAAACCTGCTGATGCAGGCGCTGGAGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAATGTGTAAGTGTAGTCACAAAACCTGCTGATGCAGGCGCTGGAGA  339

seq1  GATGGCTTAGTGATTAAGAGGACCTCCTCCAGAGGACATAGTTCAATTCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTTAGTGATTAAGAGGACCTCCTCCAGAGGACATAGTTCAATTCC  389

seq1  CAGTGTCCATTTGGCAGCTTACTGTCTGTAACGCCAGTTCCAGGGGATCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCCATTTGGCAGCTTACTGTCTGTAACGCCAGTTCCAGGGGATCT  439

seq1  GGCACCTTCACACAGACATACATGTAGGCAAAACGCTAATGAACATAATA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCTTCACACAGACATACATGTAGGCAAAACGCTAATGAACATAATA  489

seq1  ATAAATCTTTTAAAAAGAGACTTTAAAACCTGCTGATGTTTAGTGTTTGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCTTTTAAAAAGAGACTTTAAAACCTGCTGATGTTTAGTGTTTGG  539

seq1  CTTGTCTACTTGTTCTTTCTTAAGCGTACAGGGAAATGTATTTGGAGATC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTACTTGTTCTTTCTTAAGCGTACAGGGAAATGTATTTGGAGATC  589

seq1  TCTACTTCATAAGAGGAATTGTGTATCAAAATCGTCATTTATGTTTATTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTCATAAGAGGAATTGTGTATCAAAATCGTCATTTATGTTTATTT  639

seq1  GGAATTTTCTAAGGTACTTTTCTGTGTTGATGAGTGGGCTCCTCATAGAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTTCTAAGGTACTTTTCTGTGTTGATGAGTGGGCTCCTCATAGAA  689

seq1  TGAAGTTTAACATAATGAGAGAAGTAGAGAACTTCAGTGGGTTTTCAAGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTTAACATAATGAGAGAAGTAGAGAACTTCAGTGGGTTTTCAAGT  739

seq1  CAAAATTTATTGTTAAAACACAGTAGTTAGATTCTAGACATAATAAAAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTTATTGTTAAAACACAGTAGTTAGATTCTAGACATAATAAAAAA  789

seq1  TTTTAAAGAGAGGTTCAAGTCATGATTTTTTTATAACCCTTGTTTTGAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGAGAGGTTCAAGTCATGATTTTTTTATAACCCTTGTTTTGAAA  839

seq1  AAATATGATCCATCTTTTGAAATGAGATGTTATGTAGGAAGTAATTATAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGATCCATCTTTTGAAATGAGATGTTATGTAGGAAGTAATTATAC  889

seq1  CCTGTATAAAACAGTGCTGTGACAAAATTATATTGGCTTTGAAAGAGCCC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATAAAACAGTGCTGTGACAAAATTATATTGGCTTTGAAAGAGCCC  939

seq1  GATAAACAAAGCAGTTGTTTGGCAGTACTCATGTTCCCTTTGGTTTTCCC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACAAAGCAGTTGTTTGGCAGTACTCATGTTCCCTTTGGTTTTCCC  989

seq1  TTGAGGGCAAGAAAGAGACTAATTTCTAGGTCATGAAAGGAAACATTACT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGCAAGAAAGAGACTAATTTCTAGGTCATGAAAGGAAACATTACT  1039

seq1  AAGTGTTTGAATCACTAACTAAAATTTAGTTCATTTAGTTTTTGTTTCTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTTGAATCACTAACTAAAATTTAGTTCATTTAGTTTTTGTTTCTT  1089

seq1  TCTTAAAATATCAACACAGATGTCTAGCCTGCTATTGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAATATCAACACAGATGTCTAGCCTGCTATTGAATTC  1131

seq1: chr7_117414083_117414962
seq2: B6Ng01-319C24.g_67_948

seq1  GAATTCCAGTTTGTGACAATGACTAGTCATGTGTTTCTGAGGGGAACTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTTGTGACAATGACTAGTCATGTGTTTCTGAGGGGAACTAA  50

seq1  CTTGCTGTGGCGTTTGCTGGAGGTTCTTATGTCTTGCTGCTCTCAACGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGTGGCGTTTGCTGGAGGTTCTTATGTCTTGCTGCTCTCAACGTC  100

seq1  TCTTTGTGGTTTTACTGTGGTGTTGCGACTGCCGCTGTCCTTGTTTTACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTGGTTTTACTGTGGTGTTGCGACTGCCGCTGTCCTTGTTTTACG  150

seq1  GCAGGGCCTCAGTATGCAGCTTTGGCTGGCCCAAAGCTTCCTGTGTAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGCCTCAGTATGCAGCTTTGGCTGGCCCAAAGCTTCCTGTGTAGAC  200

seq1  CACACTGACCTCTAACTCAGAAATCAGCTCTGCCTGGGAGGAATGATGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGACCTCTAACTCAGAAATCAGCTCTGCCTGGGAGGAATGATGAG  250

seq1  GCCACCATGTCTGGCACTGTCTTTGTTTTTTTTTTTTTATCTGTTTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCATGTCTGGCACTGTCTTTGTTTTTTTTTTTTTATCTGTTTAGAA  300

seq1  TTTATAGAATGTGGACCAAGGTTTTCCATTATGTTGGGTAAAATTTCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGAATGTGGACCAAGGTTTTCCATTATGTTGGGTAAAATTTCCAT  350

seq1  GTATTTCTTCAAGTATTTTTGCTCCCTTTTTACTTGTTCCACATGCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCTTCAAGTATTTTTGCTCCCTTTTTACTTGTTCCACATGCTGTT  400

seq1  GAACAGAATATTGTGTGTAACAGTCACCAGATTCTCTGATGCTGTTTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGAATATTGTGTGTAACAGTCACCAGATTCTCTGATGCTGTTTATT  450

seq1  TTTCTTGTTTTTCTGTCCTTCTGACTGTATAATTTCTGTGTATCTCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTTTTTCTGTCCTTCTGACTGTATAATTTCTGTGTATCTCTTTA  500

seq1  GTAGCCCAAAGAGATTGTTGAGCCCCTCTAGTTGATTCTTTTTTGAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCCAAAGAGATTGTTGAGCCCCTCTAGTTGATTCTTTTTTGAAATA  550

seq1  AGATCTTGAAGTCCTGGCTAGCCTTCAACTCTCTACATAGGGAAGTTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTGAAGTCCTGGCTAGCCTTCAACTCTCTACATAGGGAAGTTGGC  600

seq1  CTTGAACGTCTGCTCTTCCTCTTGCAGCTTCCAGTTCAGGAGTCCTAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACGTCTGCTCTTCCTCTTGCAGCTTCCAGTTCAGGAGTCCTAGGT  650

seq1  GTGCTCCAGCACACCACGCCCTGGCTTCCTAATGCTGTGCACGCTGTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCCAGCACACCACGCCCTGGCTTCCTAATGCTGTGCACGCTGTGCA  700

seq1  CGGCGTGCACACCGTCCTCTAGAAGACTTACTCTTCAGTCGGTTCTTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCGTGCACACCGTCCTCTAGAAGACTTACTCTTCAGTCGGTTCTTGAA  750

seq1  CATTGCAGCTCATCATTCTCCATTTGGTTCTTTTATATTAGCCTCTTTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCAGCTCATCATTCTCCATTTGGTTCTTTTATATTAGCCTCTTTGG  800

seq1  CCCTTGGTCTTGGGAAGATTATATGCCCAGTACAGGGGAACGCCAGGGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGTCTTGGGAAGATTATATGCCCAGTACAGGGGAACGCCAGGGCC  850

seq1  AGGAAGCGGGAGT-GGGTGGGTT-GGGGAGTA  880
      ||||||||||||| ||||||||| ||||||||
seq2  AGGAAGCGGGAGTGGGGTGGGTTGGGGGAGTA  882