BAC Information

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BAC

Clone NameB6Ng01-319E12
Chromosome7 (Build37)
Map Location 9,557,701 - 9,558,832
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803
Downstream geneLOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139, LOC100042894, Vmn2r47, 2810047C21Rik, LOC665625, LOC545911, EG625580, LOC100042163
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319E12.bB6Ng01-319E12.g
ACCGA108952GA108953
length5081,125
definitionB6Ng01-319E12.b B6Ng01-319E12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttatatattttggatcttagtcgcctatcagatttaggattggtaaaga
tcttttcccaatctgtttgttgccattttgtcttacaaacagtatacttt
gtctaacagaagctttgcaatttcatgaggtctcatttgtcaattgtcga
tcatacatcacaagccactgctgttctgttcaggaatttttcccctgggc
ccatatacttgagtttttttccctcattctcctctataagttttagtttg
tttttataagacactacatattatatatatatagaaatatgtatttatat
atatttttatttacattatagaattatattttatattatttctatattac
aatttatgttatataagtatactacatttatattactttatattaaatat
ttatatattttatataagaccataagtttatatatatgtttatattatat
atgtatattgtgtattaatattatttatatattataattttatatattat
atattata
gaattcaatgctaacggggtctacagacagagttccatggacagccaggg
aaggctacatggagagatcctgcctcaaacaacaacaaaaacaacacaac
ttcaaacaaaactacaatgacggtcagaagacataacactttagcacatt
ggttctccacctgtgggtcatgatctcttaggggatatgtaagaccatca
ggaaacacagatatttacactaagattcatgactgtagtgaaactacagt
tatgaagtagaaatgataatttatggctgggggtgaccataacaagagga
actgtgataaagggtgttaggattagaaaggctgagcaacactgctcttg
cacatagttgcctaaagtggaaattcagcataagtgatatgataattggt
aaagcagctacataaatttaatcatctgacatggtaggtgaaaaaagtga
cttttgctaattgcactctgacttgcatgagtgtagggacatacacatgc
acacacttctttgtaggtgaggaagaactcatgaatttattgtcttcatt
acaaaatcagcatagaactagatcactgcactttggtgtttttgctacat
ctctgtctccatctgtctctctgtctctctgtgtctctctgttgctctgg
tttgtttgtttgtttgtttgcttgcttgcttgcttgctttttgagaaagg
gtttcactgtgtagctctgcctgtcctgaaactcactctgtagtccaagc
tgaccttgaactccatcaactgtctgccatgtgtgccattgccacatagg
cgcaaacaccatctttataagagtaaaattaataaataccatgggactgt
aagactggtcactatcagggacatcagagctctgcctgggcttaggaccc
acacaccatgatgatgcaacagtcagataagctaagattctctgccaccc
catacagtatccccaggccagcagaaagggatatccagagggcacatgat
agggcagagagctccactcccaggtgatattaacatgctcagataagaag
ataaaagacttctggtagattcatcatgcggactaaagcttgtactacag
agcaattgtgaatagaaactgcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9557701_9558832
seq2: B6Ng01-319E12.g_69_1193

seq1  GAATTCAATGCTAACGGGGTCTACAGACAGAGTTCCATGGACAGCCAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCTAACGGGGTCTACAGACAGAGTTCCATGGACAGCCAGGG  50

seq1  AAGGCTACATGGAGAGATCCTGCCTCAAACAACAACAAAAACAACACAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTACATGGAGAGATCCTGCCTCAAACAACAACAAAAACAACACAAC  100

seq1  TTCAAACAAAACTACAATGACGGTCAGAAGACATAACACTTTAGCACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACAAAACTACAATGACGGTCAGAAGACATAACACTTTAGCACATT  150

seq1  GGTTCTCCACCTGTGGGTCATGATCTCTTAGGGGATATGTAAGACCATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTCCACCTGTGGGTCATGATCTCTTAGGGGATATGTAAGACCATCA  200

seq1  GGAAACACAGATATTTACACTAAGATTCATGACTGTAGTGAAACTACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACACAGATATTTACACTAAGATTCATGACTGTAGTGAAACTACAGT  250

seq1  TATGAAGTAGAAATGATAATTTATGGCTGGGGGTGACCATAACAAGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGTAGAAATGATAATTTATGGCTGGGGGTGACCATAACAAGAGGA  300

seq1  ACTGTGATAAAGGGTGTTAGGATTAGAAAGGCTGAGCAACACTGCTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGATAAAGGGTGTTAGGATTAGAAAGGCTGAGCAACACTGCTCTTG  350

seq1  CACATAGTTGCCTAAAGTGGAAATTCAGCATAAGTGATATGATAATTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGTTGCCTAAAGTGGAAATTCAGCATAAGTGATATGATAATTGGT  400

seq1  AAAGCAGCTACATAAATTTAATCATCTGACATGGTAGGTGAAAAAAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGCTACATAAATTTAATCATCTGACATGGTAGGTGAAAAAAGTGA  450

seq1  CTTTTGCTAATTGCACTCTGACTTGCATGAGTGTAGGGACATACACATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCTAATTGCACTCTGACTTGCATGAGTGTAGGGACATACACATGC  500

seq1  ACACACTTCTTTGTAGGTGAGGAAGAACTCATGAATTTATTGTCTTCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTTCTTTGTAGGTGAGGAAGAACTCATGAATTTATTGTCTTCATT  550

seq1  ACAAAATCAGCATAGAACTAGATCACTGCACTTTGGTGTTTTTGCTACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATCAGCATAGAACTAGATCACTGCACTTTGGTGTTTTTGCTACAT  600

seq1  CTCTGTCTCCATCTGTCTCTCTGTCTCTCTGTGTCTCTCTGTTGCTCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCCATCTGTCTCTCTGTCTCTCTGTGTCTCTCTGTTGCTCTGG  650

seq1  TTTGTTTGTTTGTTTGTTTGCTTGCTTGCTTGCTTGCTTTTTGAGAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTGTTTGTTTGCTTGCTTGCTTGCTTGCTTTTTGAGAAAGG  700

seq1  GTTTCACTGTGTAGCTCTGCCTGTCCTGAAACTCACTCTGTAGTCCAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCACTGTGTAGCTCTGCCTGTCCTGAAACTCACTCTGTAGTCCAAGC  750

seq1  TGACCTTGAACTCCATCAACTGTCTGCCATGTGTGCCATTGCCACATAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTGAACTCCATCAACTGTCTGCCATGTGTGCCATTGCCACATAGG  800

seq1  CGCAAACACCATCTTTATAAGAGTAAAATTAATAAATACCATGGGACTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAAACACCATCTTTATAAGAGTAAAATTAATAAATACCATGGGACTGT  850

seq1  AAGACTGGTCACTATCAGGGACATCAGAGCTCTGCCTGGGCTTAGGACCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGGTCACTATCAGGGACATCAGAGCTCTGCCTGGGCTTAGGACCC  900

seq1  ACACACCATGATGATGCAACAGTCAGATAAGCTAAGGATTCTCTGCCACC  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACACACCATGATGATGCAACAGTCAGATAAGCTAA-GATTCTCTGCCACC  949

seq1  CCATACAGTATCCCCAGGCCAGCAGAAAGGGATATCCAGAGGGGCACATG  1000
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCATACAGTATCCCCAGGCCAGCAGAAAGGGATATCCAGA-GGGCACATG  998

seq1  AATAGGGGCAGAGGAAGCTCCACTCCCAGGTGATA-TAACATGCTCAGGA  1049
       ||| ||||||||  |||||||||||||||||||| ||||||||||| ||
seq2  -ATA-GGGCAGAG--AGCTCCACTCCCAGGTGATATTAACATGCTCA-GA  1043

seq1  TAAGAAGATAAAAGAACCTCTGGTAGAATCATCATGCCCGACCTAAAGC-  1098
      |||||||||||||| || ||||||||| ||||||||  ||  ||||||| 
seq2  TAAGAAGATAAAAG-ACTTCTGGTAGATTCATCATG--CGGACTAAAGCT  1090

seq1  TGTACTACAGAGCAATTGTG-ATAGAAACTGCATG  1132
      |||||||||||||||||||| ||||||||||||||
seq2  TGTACTACAGAGCAATTGTGAATAGAAACTGCATG  1125