MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-319E14
Chromosome	7 (Build37)
Map Location	125,660,395 - 125,783,395
singlet/doublet	doublet
Overlap gene	Coq7, Tmc7, B230311B06Rik, Tmc5
Upstream gene	Xylt1, LOC669758, Rps15a, Arl6ip1, 2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik
Downstream gene	Mir16, 6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b, Gpr139, LOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Xylt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233781 MGI:2451073
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC669758 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669758
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Rps15a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:267019 MGI:2389091
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arl6ip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54208 MGI:1858943
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2610207I05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233789 MGI:1919742
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043339 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Syt17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110058 MGI:104966
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042845 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042845
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	E030018N11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319622 MGI:2442416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Coq7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12850 MGI:107207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmc7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209760 MGI:2443317
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B230311B06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381914 MGI:2686541
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Tmc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74424 MGI:1921674
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mir16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56209 MGI:1891827
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6330503K22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101565 MGI:2141942
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9030624J02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71517 MGI:1918767
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310008H09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66356 MGI:1913606
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Iqck (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434232 MGI:3612188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gprc5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64297 MGI:1927596
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr139 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209776 MGI:2685341
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042871 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042871
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Gp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67133 MGI:1914383
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Umod (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22242 MGI:102674
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700007B13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71830 MGI:1919080
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 7 Proteins

name	C730027J19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:272428 MGI:2444086
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acsm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233799 MGI:2385289
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acsm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:117147 MGI:2152200
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Xylt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120407063 GeneID:233781 MGI:2451073
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : xylosyltransferase 1 transcript_id : NM_175645.3

name	Rps15a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46358374 GeneID:267019 MGI:2389091
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein S15a transcript_id : NM_170669.2

name	Arl6ip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45433589 GeneID:54208 MGI:1858943
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 6 interacting protein 1 transcript_id : NM_019419.1

name	2610207I05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:73532757 GeneID:233789 MGI:1919742
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2610207I05 gene transcript_id : NM_001031814.1

name	LOC100043339 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257761 GeneID:100043339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100043339 transcript_id : XM_001479569.1

name	Syt17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20149721 GeneID:110058 MGI:104966
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synaptotagmin XVII transcript_id : NM_138649.1

name	LOC100042845 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257687 GeneID:100042845
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100042845 transcript_id : XM_001478924.1

name	E030018N11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386258 GeneID:319622 MGI:2442416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E030018N11 gene transcript_id : NM_001033380.2

name	Coq7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378130 GeneID:12850 MGI:107207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : demethyl-Q 7 transcript_id : NM_009940.2

name	Tmc7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372654 GeneID:209760 MGI:2443317
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane channel-like gene family 7 transcript_id : NM_172476.3

name	B230311B06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257763 GeneID:381914 MGI:2686541
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : RIKEN cDNA B230311B06 gene transcript_id : XM_001001884.2

name	Tmc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893327 GeneID:74424 MGI:1921674
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane channel-like gene family 5 transcript_id : NM_028930.2

name	Mir16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802675 GeneID:56209 MGI:1891827
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : membrane interacting protein of RGS16 transcript_id : NM_019580.4

name	6330503K22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33695138 GeneID:101565 MGI:2141942
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6330503K22 gene transcript_id : NM_182995.1

name	9030624J02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383840 GeneID:71517 MGI:1918767
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9030624J02 gene transcript_id : NM_027815.3

name	2310008H09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12963566 GeneID:66356 MGI:1913606
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310008H09 gene transcript_id : NM_023197.1

name	Iqck (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124517719 GeneID:434232 MGI:3612188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : IQ motif containing K transcript_id : NM_001081446.1

name	Gprc5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956117 GeneID:64297 MGI:1927596
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor, family C, group 5, member B transcript_id : NM_022420.1

name	Gpr139 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66571296 GeneID:209776 MGI:2685341
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 139 transcript_id : NM_001024138.1

name	Gp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366873 GeneID:67133 MGI:1914383
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycoprotein 2 (zymogen granule membrane) transcript_id : NM_025989.2

name	Umod (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981927 GeneID:22242 MGI:102674
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : uromodulin transcript_id : NM_009470.2

name	1700007B13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380998 GeneID:71830 MGI:1919080
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 7 Proteins product : RIKEN cDNA 1700007B13 gene transcript_id : XM_133805.4

name	C730027J19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249087 GeneID:272428 MGI:2444086
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C730027J19 gene transcript_id : NM_178758.3

name	Acsm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802373 GeneID:233799 MGI:2385289
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-CoA synthetase medium-chain family member 2 transcript_id : NM_146197.3

name	Acsm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19745154 GeneID:117147 MGI:2152200
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-CoA synthetase medium-chain family member 1 transcript_id : NM_054094.4

name	Xylt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120407064 GeneID:233781 MGI:2451073
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008375 - acetylglucosaminyltransferase activity [Evidence IEA]; GO:0030158 - protein xylosyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 note : xylosyltransferase I product : xylosyltransferase 1 protein_id : NP_783576.2

name	Rps15a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24762230 CCDS:CCDS21768.1 GeneID:267019 MGI:2389091
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 product : ribosomal protein S15a protein_id : NP_733769.1

name	Arl6ip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45433590 CCDS:CCDS21769.1 GeneID:54208 MGI:1858943
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005829 - cytosol [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005784 - translocon complex [Evidence IPI] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006613 - cotranslational protein targeting to membrane [Evidence IPI] codon_start : 1 note : ADP-ribosylation-like factor 6 interacting protein product : ADP-ribosylation factor-like 6 interacting protein 1 protein_id : NP_062292.1

name	2610207I05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:73532758 GeneID:233789 MGI:1919742
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0000184 - mRNA catabolism, nonsense-mediated decay [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 note : phosphatidylinositol 3-kinase-related protein kinase product : PI-3-kinase-related kinase SMG-1 protein_id : NP_001026984.1

name	LOC100043339 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257762 GeneID:100043339
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479619.1

name	Syt17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20149722 GeneID:110058 MGI:104966
definition	GO_component : GO:0005802 - Golgi trans face [Evidence IDA] codon_start : 1 note : B/K protein; brain and kidney protein product : synaptotagmin XVII protein_id : NP_619590.1

name	LOC100042845 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257688 GeneID:100042845
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478974.1

name	E030018N11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83921560 GeneID:319622 MGI:2442416
definition	codon_start : 1 product : hypothetical protein LOC319622 protein_id : NP_001028552.1

name	Coq7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20587962 CCDS:CCDS21771.1 GeneID:12850 MGI:107207
definition	GO_process : GO:0019538 - protein metabolism [Evidence IEA]; GO:0006744 - ubiquinone biosynthesis [Evidence IEA] codon_start : 1 product : demethyl-Q 7 protein_id : NP_034070.1

name	Tmc7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542282 CCDS:CCDS21772.1 GeneID:209760 MGI:2443317
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 product : Tmc7 protein protein_id : NP_766064.2

name	B230311B06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257764 GeneID:381914 MGI:2686541
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001001884.2

name	Tmc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32441288 CCDS:CCDS21773.1 GeneID:74424 MGI:1921674
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 product : Tmc5 protein protein_id : NP_083206.1

name	Mir16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9625018 CCDS:CCDS21774.1 GeneID:56209 MGI:1891827
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0008889 - glycerophosphodiester phosphodiesterase activity [Evidence IEA] [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] codon_start : 1 product : membrane interacting protein of RGS16 protein_id : NP_062526.1

name	6330503K22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33695139 CCDS:CCDS21775.1 GeneID:101565 MGI:2141942
definition	GO_component : GO:0005813 - centrosome [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0051298 - centrosome duplication [Evidence ISS] codon_start : 1 product : CP110 protein protein_id : NP_892040.1

name	9030624J02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47271400 CCDS:CCDS21776.1 GeneID:71517 MGI:1918767
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC71517 protein_id : NP_082091.2

name	2310008H09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963567 GeneID:66356 MGI:1913606
definition	codon_start : 1 exception : unclassified translation discrepancy product : hypothetical protein LOC66356 protein_id : NP_075686.1

name	Iqck (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124517720 GeneID:434232 MGI:3612188
definition	codon_start : 1 product : IQ motif containing K protein_id : NP_001074915.1

name	Gprc5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956118 CCDS:CCDS21777.1 GeneID:64297 MGI:1927596
definition	GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor, family C, group 5, member B protein_id : NP_071865.1

name	Gpr139 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66571297 CCDS:CCDS21778.1 GeneID:209776 MGI:2685341
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IC]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0001620 - class A orphan receptor activity [Evidence ISS]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0008188 - neuropeptide receptor activity [Evidence IDA]; GO:0046983 - protein dimerization activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS]; GO:0007200 - G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : G protein-coupled receptor PGR3; orphan G protein-coupled receptor TRHRL2 product : G protein-coupled receptor 139 protein_id : NP_001019309.1

name	Gp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229028 CCDS:CCDS21779.1 GeneID:67133 MGI:1914383
definition	GO_function : GO:0048503 - GPI anchor binding [Evidence IEA] codon_start : 1 product : zymogen granule membrane glycoprotein 2 protein_id : NP_080265.2

name	Umod (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22128623 CCDS:CCDS21780.1 GeneID:22242 MGI:102674
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0048503 - GPI anchor binding [Evidence IEA] codon_start : 1 note : Tamm-Horsfall glycoprotein; Tamm-Horsfall protein product : uromodulin protein_id : NP_033496.1

name	1700007B13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51761889 GeneID:71830 MGI:1919080
definition	codon_start : 1 product : protein disulfide isomerase-like protein of the testis protein_id : XP_133805.2

name	C730027J19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520215 GeneID:272428 MGI:2444086
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : hypothetical protein LOC272428 protein_id : NP_848873.1

name	Acsm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122743 CCDS:CCDS21782.1 GeneID:233799 MGI:2385289
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : acyl-CoA synthetase medium-chain family member 2 protein_id : NP_666309.1

name	Acsm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16905127 CCDS:CCDS21783.1 GeneID:117147 MGI:2152200
definition	GO_component : GO:0005759 - mitochondrial matrix [Evidence IDA] [Evidence ISS]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003996 - acyl-CoA ligase activity [Evidence ISS]; GO:0047760 - butyrate-CoA ligase activity [Evidence ISS] [Evidence IEA]; GO:0015645 - fatty-acid ligase activity [Evidence IDA]; GO:0016874 - ligase activity [Evidence IEA] GO_process : GO:0018874 - benzoate metabolism [Evidence ISS]; GO:0019605 - butyrate metabolism [Evidence ISS]; GO:0015980 - energy derivation by oxidation of organic compounds [Evidence ISS]; GO:0006633 - fatty acid biosynthesis [Evidence IDA]; GO:0019395 - fatty acid oxidation [Evidence ISS] codon_start : 1 note : acetyl-Coenzyme A synthetase 3 product : butyryl Coenzyme A synthetase 1 protein_id : NP_473435.1

name	LOC669758 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669758
definition	number : 1 pseudo : _no_value

name	LOC669758 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669758
definition	number : 2 pseudo : _no_value

name	LOC100042871 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042871
definition	number : 5 pseudo : _no_value

name	LOC100042871 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042871
definition	number : 4 pseudo : _no_value

name	LOC100042871 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042871
definition	number : 3 pseudo : _no_value

name	LOC100042871 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042871
definition	number : 2 pseudo : _no_value

name	LOC100042871 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042871
definition	number : 1 pseudo : _no_value

clone name	MSMg01-521B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410L23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-352C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098A17
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-319E14.b	B6Ng01-319E14.g
ACC	GA108956	GA108957
length	970	1,137
definition	B6Ng01-319E14.b	B6Ng01-319E14.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(125,782,871 - 125,783,395)	(125,660,395 - 125,661,511)
sequence	gaattcatttttgaaaaacccagccactcctggacacggaggcccctgcc tgtagttccagccacttgggggccaaaacagaaccacttagtcctggatc tcaatgtccccagccctggaaatacaaaggtggtcacaagggtggcagtt tttacatgggttctgatgatgtaaattcagttcttatgcttgcattttct aactgacctttctccccagattttcctatttgttgtttgtttgtttgttt taaagcaaagttttattttagagtggtttgaaatttaaagaagtttttag actgtagactgtccccacacgcccctcacaggttcccctgttcactttcc acggtaggtgtggcagcttgtctgagatgtcccccagagtttggggaaag gggcactggaacattggattcccagttagcagcactctttgggaagtgtg actctctgaacattactgtgggtgggctctgaggtctcaaagactcaggc cattcgcagttttctctctctgcttgtggttcaagagtgagctgtcagct acagctccatcaccatgcctgctctctaccatggtggactctaatgctct agaaccttaatctcaataaagtcttctacaagtagccttggtcctggtgt tttgtcacaccagtagaaaagtaactaacacggtcgaattgtccaagcaa agctagcatgcattcctgatgcttaccccagagactcccacattctcacc cagcctttcccaggctgcacacattgcatctgctctcctgcctctttaga atcctctacttcgtgtcaggtctcagactttccttgcatttgatgacctg aagatgtgtgagtcagagattttggaggattgacaaatgcatctttctag ttagactggcatctgggctttagaaagaggaccactgaacatgtcctatc tctgaagaaactaattcaag	gaattcacattcaaacattattttatttcacggcctttggacaaagtgta cccttaactttattcttttaatggccacatggccttatttacacacacac acatacatacacacacacacacatacacacacacacacacgtacatacac agacacacacacacagacacacacagacacacacacagacacatacatac atacacacagacacacagacacatacacacagacacacacatacacacac acacagacacacacacagacacacacacacacacacacacacacacacac cccgcatcagcaagtaagcatgagaagctgaatatcaacagaatttttca tcttgggaggaagctatttcagagttaggctctgaaaataacaaacaaaa gattcacgaacccccgccccaagcaagtgggggtggggaggcaggccact caccattgtccctgcccggtgaagacatatagcttggaatgtgtttccag ctgttgaggcactgaaagggctggagaaaaattgcaaaaacaggtccctt cttatcagaaactgggaagtcggacagtggggaccttgcctctgccaaga acgcaggctacaagacagagggaatacgtccatggagggcagcctgcagc agtcctggaattaacttacttctcaatatggcctgcacttctgagctccc atgtggggtttaaaagatatacagcccctaggcctgacctgggagtctct gcttcagtaggtagagtagagtctgtagagtttgcctgttgattctgata tgccggctcagttaaaaaataaaatcaaaagccaaagatgaagcctgtga atgttctgtgtaatccctaggaagagaaatagacttttatatgtagatgt gacagttaatattgattgttcaatagctttcagaatcacgggaggagaaa aggctctaggcatgctttgtaatggttgagggagtttctagaattgggtt agcctctgggcatgcttacgaggggagcctttcttgaattgtctggtcca tggattggagtccttcttgcactggagttaaggagaagttgagcaagcag tgggcaggtggagcagcaagttgaagcaacaagtggg
quality values	Open. 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Hide. 49 47 62 59 62 47 51 62 59 62 56 46 39 32 32 43 40 56 49 62 62 62 62 59 62 62 62 62 54 49 62 62 62 62 62 62 62 62 59 54 54 62 62 62 62 62 62 62 62 62 62 62 62 54 42 54 62 62 62 54 59 62 62 62 62 62 62 62 59 62 62 62 49 42 62 59 62 62 59 59 62 62 62 62 62 62 62 54 49 59 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 51 59 48 38 50 62 62 62 56 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 59 62 56 62 59 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 54 38 49 62 62 62 62 62 62 62 62 62 62 59 51 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 59 62 62 62 62 62 56 59 62 62 62 59 59 59 59 56 56 56 56 62 62 62 62 62 62 62 62 62 62 54 62 62 56 56 56 62 62 62 62 62 62 62 62 62 47 54 62 62 62 62 62 62 62 62 62 62 62 62 56 62 56 62 62 62 56 54 56 56 62 62 62 62 62 62 62 62 62 56 62 62 56 62 47 62 62 62 62 62 62 56 56 62 62 62 62 62 56 62 56 62 52 48 47 62 62 62 62 62 62 62 62 54 62 62 62 47 47 62 62 62 62 52 41 62 62 54 52 62 62 62 52 62 54 54 58 52 52 52 46 52 52 54 54 42 54 52 58 46 52 58 54 58 54 52 54 52 47 54 54 54 52 49 35 52 54 50 52 54 52 58 54 58 54 45 25 41 48 52 52 47 41 52 52 54 58 54 54 46 54 50 58 45 54 52 54 42 39 58 54 54 46 54 36 58 50 58 52 49 51 58 32 48 47 50 52 41 49 42 27 52 46 41 46 50 49 58 48 46 58 58 46 51 50 49 54 50 58 51 50 24 51 54 37 29 39 50 52 49 28 51 53 37 46 39 51 52 53 52 42 48 37 51 39 29 22 24 49 37 39 37 50 28 16 49 50 54 52 39 40 44 49 41 41 43 58 23 49 50 35 50 47 37 50 51 39 52 58 58 49 19 58 36 50 58 58 49 27 53 32 39 53 40 52 37 35 44 49 49 54 30 32 13 44 33 46 49 47 34 22 40 38 32 39 49 54 20 39 38 52 39 45 53 40 37 24 31 42 16 33 45 24 50 29 41 18 44 16 26 45 31 54 21 40 47 27 49 37 45 31 54 37 49 54 29 17 21 38 40 51 30 31 29 20 9 16 22 33 32 45 33 42 31 31 24 53 27 20 31 36 31 33 23 41 45 31 53 52 40 40 19 19 13 51 47 46 19 30 28 51 46 33 28 32 35 25 52 43 31 30 29 29 31 45 21 24 23 31 43 31 29 28 15 31 21 6 36 30 36 37 31 30 29 31 23 30 29 45 46 29 31 13 14 36 25 20 46 13 32 46 31 25 31 20 42 34 34 46 46 43 31 30 31 24 31 19 42 31 33 30 33 21 27 22 26 26 31 29 33 29 42 32 23 20 27 32 16 12 16 15 6 7 25 23 25 24 29 19 31 23 41 13 44 20 11 30 26 10 14 23 14 6 31 12 31 13 31 30 7 24 6 9 10 26 27 18 29 24 34 34 23 35 14 29 31 19 11 19 44 11 27 10 7 5 7 29 28 10 22 20 25 9 41 31 29 13 27 44 30 32 21 32 13 7 15 22 10 34 39 32 18 21 23 12 16 14 13 15 23 32 48 30 21 16 27 26 32 32 29 22 16 6 31 14 34 39 9 30 8 11 22 14 32 11 37 10 11 19 23 12 26 6 7 6 6 6 25 21 9 18 13 27 21 11 21 8 6 11 15 10 27 5 9 16 28 11 7 33 10 7 9 7 9 16 10 13 7 11 8 13 10 28 17 12 7 11 7 11 20 11 5 6 11 15 5 8 6 12 5 16 20 10 4 14 33 27 13 17 7 10 24 20 10 22 6 8 11 4 6 6 9 7 13 5 4 12 4 4 11 12 15 6 6 7 4 7 13 24 25

Alignment Information

BAC End 1

BAC End 2

seq1: chr7_125782871_125783395
seq2: B6Ng01-319E14.b_51_575 (reverse)

seq1  AAGCAGAGAGAGAAAACTGCGAATGGCCTGAGTCTTTGAGACCTCAGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGAGAGAAAACTGCGAATGGCCTGAGTCTTTGAGACCTCAGAGC  50

seq1  CCACCCACAGTAATGTTCAGAGAGTCACACTTCCCAAAGAGTGCTGCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCACAGTAATGTTCAGAGAGTCACACTTCCCAAAGAGTGCTGCTAA  100

seq1  CTGGGAATCCAATGTTCCAGTGCCCCTTTCCCCAAACTCTGGGGGACATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAATCCAATGTTCCAGTGCCCCTTTCCCCAAACTCTGGGGGACATC  150

seq1  TCAGACAAGCTGCCACACCTACCGTGGAAAGTGAACAGGGGAACCTGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACAAGCTGCCACACCTACCGTGGAAAGTGAACAGGGGAACCTGTGA  200

seq1  GGGGCGTGTGGGGACAGTCTACAGTCTAAAAACTTCTTTAAATTTCAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCGTGTGGGGACAGTCTACAGTCTAAAAACTTCTTTAAATTTCAAAC  250

seq1  CACTCTAAAATAAAACTTTGCTTTAAAACAAACAAACAAACAACAAATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTAAAATAAAACTTTGCTTTAAAACAAACAAACAAACAACAAATAG  300

seq1  GAAAATCTGGGGAGAAAGGTCAGTTAGAAAATGCAAGCATAAGAACTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCTGGGGAGAAAGGTCAGTTAGAAAATGCAAGCATAAGAACTGAA  350

seq1  TTTACATCATCAGAACCCATGTAAAAACTGCCACCCTTGTGACCACCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATCATCAGAACCCATGTAAAAACTGCCACCCTTGTGACCACCTTT  400

seq1  GTATTTCCAGGGCTGGGGACATTGAGATCCAGGACTAAGTGGTTCTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCCAGGGCTGGGGACATTGAGATCCAGGACTAAGTGGTTCTGTTT  450

seq1  TGGCCCCCAAGTGGCTGGAACTACAGGCAGGGGCCTCCGTGTCCAGGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCCCAAGTGGCTGGAACTACAGGCAGGGGCCTCCGTGTCCAGGAGT  500

seq1  GGCTGGGTTTTTCAAAAATGAATTC  525
      |||||||||||||||||||||||||
seq2  GGCTGGGTTTTTCAAAAATGAATTC  525

seq1: chr7_125660395_125661511
seq2: B6Ng01-319E14.g_68_1204

seq1  GAATTCACATTCAAACATTATTTTATTTCACGGCCTTTGGACAAAGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTCAAACATTATTTTATTTCACGGCCTTTGGACAAAGTGTA  50

seq1  CCCTTAACTTTATTCTTTTAATGGCCACATGGCCTTATTTACACACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAACTTTATTCTTTTAATGGCCACATGGCCTTATTTACACACACAC  100

seq1  ACATACATACACACACACACACATACACACACACACACACGTACATACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATACACACACACACACATACACACACACACACACGTACATACAC  150

seq1  AGACACACACACACAGACACACACAGACACACACACAGACACATACATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACACACACAGACACACACAGACACACACACAGACACATACATAC  200

seq1  ATACACACAGACACACAGACACATACACACAGACACACACATACACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACAGACACACAGACACATACACACAGACACACACATACACACAC  250

seq1  ACACAGACACACACACAGACACACACACACACACACACACACACACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACACACACACAGACACACACACACACACACACACACACACACAC  300

seq1  CCCGCATCAGCAAGTAAGCATGAGAAGCTGAATATCAACAGAATTTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCATCAGCAAGTAAGCATGAGAAGCTGAATATCAACAGAATTTTTCA  350

seq1  TCTTGGGAGGAAGCTATTTCAGAGTTAGGCTCTGAAAATAACAAACAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGAGGAAGCTATTTCAGAGTTAGGCTCTGAAAATAACAAACAAAA  400

seq1  GATTCACGAACCCCCGCCCCAAGCAAGTGGGGGTGGGGAGGCAGGCCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCACGAACCCCCGCCCCAAGCAAGTGGGGGTGGGGAGGCAGGCCACT  450

seq1  CACCATTGTCCCTGCCCGGTGAAGACATATAGCTTGGAATGTGTTTCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTGTCCCTGCCCGGTGAAGACATATAGCTTGGAATGTGTTTCCAG  500

seq1  CTGTTGAGGCACTGAAAGGGCTGGAGAAAAATTGCAAAAACAGGTCCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGAGGCACTGAAAGGGCTGGAGAAAAATTGCAAAAACAGGTCCCTT  550

seq1  CTTATCAGAAACTGGGAAGTCGGACAGTGGGGACCTTGCCTCTGCCAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCAGAAACTGGGAAGTCGGACAGTGGGGACCTTGCCTCTGCCAAGA  600

seq1  ACGCAGGCTACAAGACAGAGGGAATACGTCCATGGAGGGCAGCCTGCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAGGCTACAAGACAGAGGGAATACGTCCATGGAGGGCAGCCTGCAGC  650

seq1  AGTCCTGGAATTAACTTACTTCTCAATATGGCCTGCACTTCTGAGCTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGGAATTAACTTACTTCTCAATATGGCCTGCACTTCTGAGCTCCC  700

seq1  ATGTGGGGTTTAAAAGATATACAGCCCCTAGGCCTGACCTGGGAGTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGGTTTAAAAGATATACAGCCCCTAGGCCTGACCTGGGAGTCTCT  750

seq1  GCTTCAGTAGGTAGAGTAGAGTCTGTAGAGTTTGCCTGTTGATTCTGATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGTAGGTAGAGTAGAGTCTGTAGAGTTTGCCTGTTGATTCTGATA  800

seq1  TGCCGGCTCAGTTAAAAAATAAAATCAAAAGCCAAAGATGAAGCCTGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGGCTCAGTTAAAAAATAAAATCAAAAGCCAAAGATGAAGCCTGTGA  850

seq1  ATGTTCTGTGTAATCCCTAGGAAGAGAAATAGACTTTTATATGTAGATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTGTGTAATCCCTAGGAAGAGAAATAGACTTTTATATGTAGATGT  900

seq1  GACAGTTAATATTGATTG-TCAATAGCTTCCAGAATCAC-GGAGGAGACA  948
      |||||||||||||||||| |||||||||| ||||||||| |||||||| |
seq2  GACAGTTAATATTGATTGTTCAATAGCTTTCAGAATCACGGGAGGAGAAA  950

seq1  AGGCTCTAGGCATGC-TTGT-ATGGTTGAGGGAGTTTCTAG-ATTGGGTT  995
      ||||||||||||||| |||| |||||||||||||||||||| ||||||||
seq2  AGGCTCTAGGCATGCTTTGTAATGGTTGAGGGAGTTTCTAGAATTGGGTT  1000

seq1  AGCCTCTGGGCATGCTTACGA-GGGAGCCTTCCT--GATTGTCTGGTCCA  1042
      ||||||||||||||||||||| ||||||||| ||   |||||||||||||
seq2  AGCCTCTGGGCATGCTTACGAGGGGAGCCTTTCTTGAATTGTCTGGTCCA  1050

seq1  TGGATTGGAGTCC-TCCTGCACT-GAG-TAAGGAGA--GTGAGC-AGCAG  1086
      ||||||||||||| || |||||| ||| ||||||||   ||||| |||||
seq2  TGGATTGGAGTCCTTCTTGCACTGGAGTTAAGGAGAAGTTGAGCAAGCAG  1100

seq1  TGGGCAG--TGAGCAGC-AGT--GAGCAAC-AGTGGG  1117
      |||||||   ||||||| |||   |||||| ||||||
seq2  TGGGCAGGTGGAGCAGCAAGTTGAAGCAACAAGTGGG  1137

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information