BAC Information

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BAC

Clone NameB6Ng01-319O16
Chromosome7 (Build37)
Map Location 7,536,449 - 7,673,061
singlet/doubletdoublet
Overlap geneLOC665470, EG665474, EG628368, LOC100042636, LOC665485
Upstream geneZim2, Zim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33
Downstream geneEG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319O16.bB6Ng01-319O16.g
ACCGA109429GA109430
length1,190969
definitionB6Ng01-319O16.b B6Ng01-319O16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,671,871 - 7,673,061)(7,536,449 - 7,537,421)
sequence
gaattcctccagggccaggagcaatcggaaaatgatatgaatcataacta
tggaacaaacacctcctttgactagagaaataaaagcagacagaaatttg
atgtgctgatttgcatggcacttcacaatccacacttaccaggtttaagg
caggacaaatatgttcattttagtgggtgtcttctttctcctcaagattc
aacttctcatggccaattacattgattccacatgcttttggagactaaac
ctgaatgaagtcaatgataaagatttggatcaaacttgttccttcatcct
tggagcagttcagatgcctatggagaaagattatttcaaggagactctga
atgtcttgtaagtgcatttgtattgtccatgtaaatgacaacttgaatat
atctttagtgctctgaggatggagattaggcaaatgcttgagtcctttgt
actgttgctaagtctgaacactaagaaacaacatgatttatcttacagaa
tcaatcatagtttctccttttaagtaattcagtggaggttttggttttct
ttaagttaggtggcctccgacttaaagactggaagctgaggaataaagga
ctatctatgttgattcttcacataaagccctcctagtaacagtttttact
gcactctagacagtgatgacttattgaaattgattctgtaatatttcatt
gtgttttactctgagaatatgcaaatagatggccataaacactgctaaca
gtcctttcatcagtttgttgctccaagagcttatgtggattacagtaatt
ctcatggaacatagagttgtcaagaactttacatatatacaaacttactc
tctaaaattcattacatgtggccacttcttgtcttctgaagcttcatcaa
gtttggaaagagaagagctttacaatcagaaattcacatttcatacgatt
gcctagatggacatttttgtatgtatatgggcaaagaatatttacgtcat
tagagatcagatatccaaatattttaaaagaataaattcaaagcactgtg
gcctcgtgctcctctgtcaataatataatccactggctttacatttttat
aagtcagttcctgcactctctctcttagagataaaaatatagtgtggatc
cattggtattcaatggaatgttgacattcctgaatatgag
gaattcccatttacatataacatcactttgtccaaggaattccttttgca
gtttgacattaatagtttataggtgcttcttcttatgtttgttcacatgc
aaatgtggaataaataatttatatcagtagttccagatgttctgattgtc
aaattgacagttagaattatattttcaaaataaaatattcttagtactaa
actgggaataactgtcactcaattgtctatcactaactcatgcttcattc
actactattcgtatgaggtatgaaatagtatttcgtggtcttttcatcta
gctcaatttcatatgtctaggtaccagaatgtgttatgaaaattttgttc
tattatgatggattagatttgtttaaacttgttttattttattattctct
catagaatcctgtcattttctaatgagtgacataaagaggatctgataaa
aaggaaaggaaataggcatattaactatgatatatttgccagtagaactg
acaattgttcatatcccaatagaaggaatggaaactgtaattaggatata
ttacgtgagaattacaagttattttcaataaataaaacaattaaaaattt
aaaaaatctccctgttctcagagaatgatctttctgttgtgtgttgtgtt
cttttggtaggtgtttttgtaaagaattattccacacatatccatcaaat
atattgttcttgaattacctttttcccttttattaaacattatactgttt
tcctccattttttaataaagaaaagttctcctcttgtatatgaatgtgtc
ttcctacccctctgcaggcactaaggaatgttcttaaaaaaaaaacagtt
ttggttgtctttgatttcatttagagaattgttaacaaaaaagttcaatt
ataactgaattatttgatgattttgtctggtgctgtatgctgacttgagg
tggtgtataaccttatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7671871_7673061
seq2: B6Ng01-319O16.b_50_1239 (reverse)

seq1  CTCACTATTCAAGGAATGTAAACATATCATTGGATTCCATATGATCCACA  50
      |||| ||||| |||||||| |||||  ||||| || |||   ||||||||
seq2  CTCA-TATTC-AGGAATGTCAACATTCCATTGAATACCAATGGATCCACA  48

seq1  -TATATTTT--ACTCTAA-AGAGAGAGTGCA-GAACTGAACTTAATAAAA  95
       ||||||||   |||||| |||||||||||| |||||| |||||  ||||
seq2  CTATATTTTTATCTCTAAGAGAGAGAGTGCAGGAACTG-ACTTATAAAAA  97

seq1  TGTAAAAGCCAGT-GATTATA-TATGAACAGAGGGAAGCACGAAGCCACA  143
      ||| ||||||||| ||||||| |||  |||||||  ||||||| ||||||
seq2  TGT-AAAGCCAGTGGATTATATTATTGACAGAGG--AGCACGAGGCCACA  144

seq1  GTGCTTTTGAATTTTATCTTTTAAAATATTTGGATATCTTGATCTCTAAT  193
      |||| |||||||||  |||||||||||||||||||||| |||||||||||
seq2  GTGC-TTTGAATTTATTCTTTTAAAATATTTGGATATC-TGATCTCTAAT  192

seq1  GACCTAAATATTCTTTGCCCATATACATACAAAAATGTCCATCTAGGCAA  243
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTAAATATTCTTTGCCCATATACATACAAAAATGTCCATCTAGGCAA  242

seq1  TCGTATGAAATGTGAATTTCTGATTGTAAAGCTCTTCTCTTTCCAAACTT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTATGAAATGTGAATTTCTGATTGTAAAGCTCTTCTCTTTCCAAACTT  292

seq1  GATGAAGCTTCAGAAGACAAGAAGTGGCCACATGTAATGAATTTTAGAGA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGCTTCAGAAGACAAGAAGTGGCCACATGTAATGAATTTTAGAGA  342

seq1  GTAAGTTTGTATATATGTAAAGTTCTTGACAACTCTATGTTCCATGAGAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTTTGTATATATGTAAAGTTCTTGACAACTCTATGTTCCATGAGAA  392

seq1  TTACTGTAATCCACATAAGCTCTTGGAGCAACAAACTGATGAAAGGACTG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTAATCCACATAAGCTCTTGGAGCAACAAACTGATGAAAGGACTG  442

seq1  TTAGCAGTGTTTATGGCCATCTATTTGCATATTCTCAGAGTAAAACACAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGTGTTTATGGCCATCTATTTGCATATTCTCAGAGTAAAACACAA  492

seq1  TGAAATATTACAGAATCAATTTCAATAAGTCATCACTGTCTAGAGTGCAG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATATTACAGAATCAATTTCAATAAGTCATCACTGTCTAGAGTGCAG  542

seq1  TAAAAACTGTTACTAGGAGGGCTTTATGTGAAGAATCAACATAGATAGTC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTGTTACTAGGAGGGCTTTATGTGAAGAATCAACATAGATAGTC  592

seq1  CTTTATTCCTCAGCTTCCAGTCTTTAAGTCGGAGGCCACCTAACTTAAAG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTCCTCAGCTTCCAGTCTTTAAGTCGGAGGCCACCTAACTTAAAG  642

seq1  AAAACCAAAACCTCCACTGAATTACTTAAAAGGAGAAACTATGATTGATT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAAACCTCCACTGAATTACTTAAAAGGAGAAACTATGATTGATT  692

seq1  CTGTAAGATAAATCATGTTGTTTCTTAGTGTTCAGACTTAGCAACAGTAC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGATAAATCATGTTGTTTCTTAGTGTTCAGACTTAGCAACAGTAC  742

seq1  AAAGGACTCAAGCATTTGCCTAATCTCCATCCTCAGAGCACTAAAGATAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACTCAAGCATTTGCCTAATCTCCATCCTCAGAGCACTAAAGATAT  792

seq1  ATTCAAGTTGTCATTTACATGGACAATACAAATGCACTTACAAGACATTC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGTTGTCATTTACATGGACAATACAAATGCACTTACAAGACATTC  842

seq1  AGAGTCTCCTTGAAATAATCTTTCTCCATAGGCATCTGAACTGCTCCAAG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTCCTTGAAATAATCTTTCTCCATAGGCATCTGAACTGCTCCAAG  892

seq1  GATGAAGGAACAAGTTTGATCCAAATCTTTATCATTGACTTCATTCAGGT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGGAACAAGTTTGATCCAAATCTTTATCATTGACTTCATTCAGGT  942

seq1  TTAGTCTCCAAAAGCATGTGGAATCAATGTAATTGGCCATGAGAAGTTGA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTCCAAAAGCATGTGGAATCAATGTAATTGGCCATGAGAAGTTGA  992

seq1  ATCTTGAGGAGAAAGAAGACACCCACTAAAATGAACATATTTGTCCTGCC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAGGAGAAAGAAGACACCCACTAAAATGAACATATTTGTCCTGCC  1042

seq1  TTAAACCTGGTAAGTGTGGATTGTGAAGTGCCATGCAAATCAGCACATCA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCTGGTAAGTGTGGATTGTGAAGTGCCATGCAAATCAGCACATCA  1092

seq1  AATTTCTGTCTGCTTTTATTTCTCTAGTCAAAGGAGGTGTTTGTTCCATA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTGTCTGCTTTTATTTCTCTAGTCAAAGGAGGTGTTTGTTCCATA  1142

seq1  GTTATGATTCATATCATTTTCCGATTGCTCCTGGCCCTGGAGGAATTC  1191
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGATTCATATCATTTTCCGATTGCTCCTGGCCCTGGAGGAATTC  1190

seq1: chr7_7536449_7537421
seq2: B6Ng01-319O16.g_71_1039

seq1  GAATTCCCATTTACATATAACATCACTTTGTCCAAGGAATTCCTTTTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTTACATATAACATCACTTTGTCCAAGGAATTCCTTTTGCA  50

seq1  GTTTGACATTAATAGTTTATAGGTGCTTCTTCTTATGTTTGTTCACATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGACATTAATAGTTTATAGGTGCTTCTTCTTATGTTTGTTCACATGC  100

seq1  AAATGTGGAATAAATAATTTATATCAGTAGTTCCAGATGTTCTGATTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGGAATAAATAATTTATATCAGTAGTTCCAGATGTTCTGATTGTC  150

seq1  AAATTGACAGTTAGAATTATATTTTCAAAATAAAATATTCTTAGTACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGACAGTTAGAATTATATTTTCAAAATAAAATATTCTTAGTACTAA  200

seq1  ACTGGGAATAACTGTCACTCAATTGTCTATCACTAACTCATGCTTCATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGAATAACTGTCACTCAATTGTCTATCACTAACTCATGCTTCATTC  250

seq1  ACTACTATTCGTATGAGGTATGAAATAGTATTTCGTGGTCTTTTCATCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTATTCGTATGAGGTATGAAATAGTATTTCGTGGTCTTTTCATCTA  300

seq1  GCTCAATTTCATATGTCTAGGTACCAGAATGTGTTATGAAAATTTTGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAATTTCATATGTCTAGGTACCAGAATGTGTTATGAAAATTTTGTTC  350

seq1  TATTATGATGGATTAGATTTGTTTAAACTTGTTTTATTTTATTATTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGATGGATTAGATTTGTTTAAACTTGTTTTATTTTATTATTCTCT  400

seq1  CATAGAATCCTGTCATTTTCTAATGAGTGACATAAAGAGGATCTGATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAATCCTGTCATTTTCTAATGAGTGACATAAAGAGGATCTGATAAA  450

seq1  AAGGAAAGGAAATAGGCATATTAACTATGATATATTTGCCAGTAGAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGGAAATAGGCATATTAACTATGATATATTTGCCAGTAGAACTG  500

seq1  ACAATTGTTCATATCCCAATAGAAGGAATGGAAACTGTAATTAGGATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTGTTCATATCCCAATAGAAGGAATGGAAACTGTAATTAGGATATA  550

seq1  TTACGTGAGAATTACAAGTTATTTTCAATAAATAAAACAATTAAAAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGTGAGAATTACAAGTTATTTTCAATAAATAAAACAATTAAAAATTT  600

seq1  AAAAAATCTCCCTGTTCTCAGAGAATGATCTTTCTGTTGTGTGTTGTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATCTCCCTGTTCTCAGAGAATGATCTTTCTGTTGTGTGTTGTGTT  650

seq1  CTTTTGGTAGGTGTTTTTGTAAAGAATTATTCCACACATATCCATCAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGTAGGTGTTTTTGTAAAGAATTATTCCACACATATCCATCAAAT  700

seq1  ATATTGTTCTTGAATTACCTTTTTCCCTTTTATTAAACATTATACTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTTCTTGAATTACCTTTTTCCCTTTTATTAAACATTATACTGTTT  750

seq1  TCCTCCATTTTTTAATAAAGAAAAGTTCTCCTCTTGTATATGAATGTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCATTTTTTAATAAAGAAAAGTTCTCCTCTTGTATATGAATGTGTC  800

seq1  TTCCTA-CCCTCTGCAGGCAACTTAGGAATG-TCTT-AAAAAAAAACAGT  847
      |||||| |||||||||||| ||| ||||||| |||| |||||||||||||
seq2  TTCCTACCCCTCTGCAGGC-ACTAAGGAATGTTCTTAAAAAAAAAACAGT  849

seq1  TTT-GTTGTCTTTGATTTCATTTAGAGAA-TGTTAACAAAAAAGTTCAAT  895
      ||| ||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTTGGTTGTCTTTGATTTCATTTAGAGAATTGTTAACAAAAAAGTTCAAT  899

seq1  TATAACTGAAAATTATTTGATGATTTTGTCTGGTTGCTGTTATTGCTGTA  945
      ||||||||  ||||||||||||||||||||||| ||||||   ||||| |
seq2  TATAACTG--AATTATTTGATGATTTTGTCTGG-TGCTGT--ATGCTG-A  943

seq1  CTTGAGGTGTGTTAATAACCTTTATTTT  973
      ||||||||| ||  |||||| |||||||
seq2  CTTGAGGTG-GTGTATAACC-TTATTTT  969