BAC Information

Click to search

BAC

Clone NameB6Ng01-320I22
Chromosome7 (Build37)
Map Location 68,077,713 - 68,078,853
singlet/doubletsinglet
Overlap geneLOC100041229
Upstream geneSnrpn, Snurf, EG664849, LOC100041201, LOC100041211, LOC664896
Downstream geneLOC625287, D0Kist2, LOC100041248, LOC100041259, EG664943, B230209E15Rik, EG620934
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320I22.bB6Ng01-320I22.g
ACCGA109895GA109896
length1,2131,153
definitionB6Ng01-320I22.b B6Ng01-320I22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tacactacactccagtcagaatggctaagttcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacattcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaggatcccacaatacctctcttgggc
atatatccagaaaaatgtcccaaccggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacataggaatggatacagaaaatgtggtacatttacacaat
gcagtaccactcagctattaaaaaaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactctcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaatttgctaaacgcatgaaattcaa
gaagaacgaagaccaaagtgtggacactttgccctttcttagaaatggga
acaaaacacccatggaaggaggaacagagacaaaatttggagctgtgacg
aaaggatggaccatctagtgattgccatatgcagggatccatcccatagt
ctccaaacgctgacaccattgcatacactagcaagattttgctgaaagga
cccagatatagctgtctcttgtgagactatgccggggcctagcaaacaca
aaagtagatgctcacagtcagctattggatgggtcacacggcccccaata
gaggagctagagaaattacccaagagctaaagggaactgcaacactatag
gtggaacacaatatgaactaagcagtaccctggagatcttgtcttctagc
tgcatatgtatcaaagatggcctagtcgccatccactgcaaagagagctc
attggacttgtcaaccttatatgcctcagtacaaggtaatctcaatggcc
taaaaggaattgggtgtggtagggaatgtctcttccactagctgagcatt
gcgtgtactagct
gaattcctacaaccatggctctgtagacacagcatagtcacatgttccag
tattttattaatggagtaaggtaactcaatgccttggatctgggcttggg
agatatctgagctagttagctggtcaactcttctgaactaattcatccaa
tcctactgtcagaacagagcacagagattaatcagctttcctgtactcat
accctcaggtatggcacacttacattcacatcatcagtgatagttctaat
gtgctgcccaggtgagttgcagaacctaatctctaagtgtctagagtcat
gtaaggagcagtctcaggaatgctatgccctgcctgaagtgtcacatagg
gcaagggtcatctcaaatgttgtctgcctatgtgggtctctgtggtatct
gactggtgataatctgaggctaagttcctgtctcagctgcttggtaccag
agtactggtaatcttgaattgctttctgcttggtcctttacgcatcaggt
ggatatccaagcatttgtatcattaaataatatttttgaatacttctatt
aaatcatctgatggtatatcttataaaatggctaatacagaaaatcatgt
cttcatagctatataaataaaatgtaacaaagacataaaatggctgagaa
agtactctcaaatttgtcagtctagagcatgaatatatcttagctttggg
aagaacttaacagtatccttcggggttagtgcattactagtataaacaaa
acaattttaatatagagatccatattctgagacagctgctatgggcttac
aacctagagacccctggtctctcctgtgcacaatcatcagcttgtctact
ccactaacaataccacagtctgaaaggcctccaaggagttcctatgcata
cagggcaactcacccaacagtctgaaagactccctgggtgtttggctgca
cacagggcaacagatgtcatagtctgaaagtctccaaagaggaatagcta
catgtagggtaactgatagttcattcctctaagtccaaaattctgagtgc
ccttacaaggagaatctgcagaacgcccacatcaaacagaatcagtactt
gttctgttcttcctggaaaaccccacagctgtatcttctggagaaaaagc
cac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_68077713_68078853
seq2: B6Ng01-320I22.g_63_1215

seq1  GAATTCCTACAACCATGGCTCTGTAGACACAGCATAGTCACATGTTCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACAACCATGGCTCTGTAGACACAGCATAGTCACATGTTCCAG  50

seq1  TATTTTATTAATGGAGTAAGGTAACTCAATGCCTTGGATCTGGGCTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATTAATGGAGTAAGGTAACTCAATGCCTTGGATCTGGGCTTGGG  100

seq1  AGATATCTGAGCTAGTTAGCTGGTCAACTCTTCTGAACTAATTCATCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCTGAGCTAGTTAGCTGGTCAACTCTTCTGAACTAATTCATCCAA  150

seq1  TCCTACTGTCAGAACAGAGCACAGAGATTAATCAGCTTTCCTGTACTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTGTCAGAACAGAGCACAGAGATTAATCAGCTTTCCTGTACTCAT  200

seq1  ACCCTCAGGTATGGCACACTTACATTCACATCATCAGTGATAGTTCTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCAGGTATGGCACACTTACATTCACATCATCAGTGATAGTTCTAAT  250

seq1  GTGCTGCCCAGGTGAGTTGCAGAACCTAATCTCTAAGTGTCTAGAGTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGCCCAGGTGAGTTGCAGAACCTAATCTCTAAGTGTCTAGAGTCAT  300

seq1  GTAAGGAGCAGTCTCAGGAATGCTATGCCCTGCCTGAAGTGTCACATAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGAGCAGTCTCAGGAATGCTATGCCCTGCCTGAAGTGTCACATAGG  350

seq1  GCAAGGGTCATCTCAAATGTTGTCTGCCTATGTGGGTCTCTGTGGTATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGGTCATCTCAAATGTTGTCTGCCTATGTGGGTCTCTGTGGTATCT  400

seq1  GACTGGTGATAATCTGAGGCTAAGTTCCTGTCTCAGCTGCTTGGTACCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGTGATAATCTGAGGCTAAGTTCCTGTCTCAGCTGCTTGGTACCAG  450

seq1  AGTACTGGTAATCTTGAATTGCTTTCTGCTTGGTCCTTTACGCATCAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTGGTAATCTTGAATTGCTTTCTGCTTGGTCCTTTACGCATCAGGT  500

seq1  GGATATCCAAGCATTTGTATCATTAAATAATATTTTTGAATACTTCTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCCAAGCATTTGTATCATTAAATAATATTTTTGAATACTTCTATT  550

seq1  AAATCATCTGATGGTATATCTTATAAAATGGCTAATACAGAAAATCATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATCTGATGGTATATCTTATAAAATGGCTAATACAGAAAATCATGT  600

seq1  CTTCATAGCTATATAAATAAAATGTAACAAAGACATAAAATGGCTGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAGCTATATAAATAAAATGTAACAAAGACATAAAATGGCTGAGAA  650

seq1  AGTACTCTCAAATTTGTCAGTCTAGAGCATGAATATATCTTAGCTTTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTCTCAAATTTGTCAGTCTAGAGCATGAATATATCTTAGCTTTGGG  700

seq1  AAGAACTTAACAGTATCCTTCGGGGTTAGTGCATTACTAGTATAAACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTTAACAGTATCCTTCGGGGTTAGTGCATTACTAGTATAAACAAA  750

seq1  ACAATTTTAATATAGAGATCCATATTCTGAGACAGCTGCTATGGGCTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTTAATATAGAGATCCATATTCTGAGACAGCTGCTATGGGCTTAC  800

seq1  AACCTAGAGACCCCTGGTCTCTCCTGTGCACAATCATCAGCTTGTCTACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGAGACCCCTGGTCTCTCCTGTGCACAATCATCAGCTTGTCTACT  850

seq1  CCACTAACAATACCACAGTCTG-AAGGCCTCCAAGGAGTTCCTATGCATA  899
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CCACTAACAATACCACAGTCTGAAAGGCCTCCAAGGAGTTCCTATGCATA  900

seq1  CAGGGCAACTCACCCAACAGTCTGAAAGACTCCCT-GGTGTTTGGCTGCA  948
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAGGGCAACTCACCCAACAGTCTGAAAGACTCCCTGGGTGTTTGGCTGCA  950

seq1  CACAGGGCAACAGATGTCATAGTCTGAAAGTCTCCAAAGA-GAATAGCTA  997
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CACAGGGCAACAGATGTCATAGTCTGAAAGTCTCCAAAGAGGAATAGCTA  1000

seq1  CATGTAGGGTAACTGATAGTTCATTCCTCTAAAGTCCCAAAATTCTGAGT  1047
      |||||||||||||||||||||||||||||| |||| ||||||||||||||
seq2  CATGTAGGGTAACTGATAGTTCATTCCTCT-AAGT-CCAAAATTCTGAGT  1048

seq1  G-CCTTAC-AGGAG-ATCTGCAG-ACG-CCACATC-AACAG-ATCAGTAA  1090
      | |||||| ||||| |||||||| ||| ||||||| ||||| |||||| |
seq2  GCCCTTACAAGGAGAATCTGCAGAACGCCCACATCAAACAGAATCAGT-A  1097

seq1  CTTG-TCTGT--CTCCT-GAAAACCCCACAGCCTGTATCTTCT-GAG-AA  1134
      |||| |||||   |||| ||||||||||||| ||||||||||| ||| ||
seq2  CTTGTTCTGTTCTTCCTGGAAAACCCCACAG-CTGTATCTTCTGGAGAAA  1146

seq1  AAGCCAC  1141
      |||||||
seq2  AAGCCAC  1153