BAC Information

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BAC

Clone NameB6Ng01-320J21
Chromosome7 (Build37)
Map Location 18,053,717 - 18,054,902
singlet/doubletsinglet
Overlap genenone
Upstream geneNpas1, LOC629352, Grlf1, LOC670915, LOC100038912, Ceacam15, EG666641, LOC434127, Ceacam9, Ap2s1, Slc1a5, Fkrp, Strn4, Prkd2, Dact3, Gng8, Ptgir, Calm3, EG434128, 0710005I19Rik, LOC100042835, LOC434130, Ppp5c, Hif3a, Psg16, LOC100042844, LOC640145, Ceacam3, Psg29
Downstream geneLOC414361, LOC671132, LOC100042868, Psg-ps1, LOC666767, Psg30, Ppia-ps7_184.1, Ceacam14, EG381852, Ceacam11, Ceacam13, LOC384560, Ceacam12, Igfl3, LOC671190, Mill1, Psg18, LOC546936, Psg28, LOC666831
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320J21.bB6Ng01-320J21.g
ACCGA109941GA109942
length1,2171,177
definitionB6Ng01-320J21.b B6Ng01-320J21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacgtccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagacgatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggcaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatggagactgaagtgtggacactatgcccctccttagaagttgaaa
caaaacaccctaggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctattgggatggatcacagggctccc
aatggaagagctagagaaagtacccaaggagctaaagggatctgcaccct
atcggtggaacaacattatgactaaccagtaccccggagctcttgactct
agctgcatatgtatcaaaagatgggcctagtaggccatccactggaaaga
gaagccatttggaacacgccaactttatatgcctcagttacagaagttac
gctaagctaaaaggggattggcttgggtaagaggaaatgtgctagtgatg
cacgtactcgtagtaca
gaattcaaaagcttcatctgcagtgagaaacacttacatagagatctgta
aaaaggatgctacattagcatatggtcaaatggtcccaaagataagctac
ttggttagaatctatgtttagcattttataagtcatgaggtacaaaacta
ctactgagtttttaaacaatttattcaattagaggcaaacacatacatta
aattaacctttcacagaccagctcaggagctctggttctaattatttatt
tgtttatttgcttgcttgcttgtttgtttattcctttattcatttgttca
atgttagtgagtccactgtcactctcttcagacacaccaaaagagggcat
cagatcccattacagatggttgtgagccaccatgtgattgctgggaactg
aactcaggacctctggaagagaaggcagtgcttttaatttctacagctct
gggactctggttctcccttgaaggtggctgaggggaaagtgtgtctgagg
ggataaaacatggtcttctgagagactaaggttgctttctatattagccc
tttacttgtcttgactctaaattactctgaggccagaagctgcaggcctc
taggcaaagtaacacctgctgcttaacaatgggagtggaagtataagggg
cagtggattaaggacagaggtactttgtgattttctccacaggtcctcca
tgccagacactaaggctgagagctcatttaaccccttgtcagttagagaa
aagtagccctcaggaatgcttttattttttttaagattctaatctttgtt
tctaagaataaagttaaaataaagggaaacatgtcatactatatgatctg
attataatttttcttagcttctgtgttactctattctctcaacttctaaa
ttacaccacactgatgctcctcttcatcctcctaattttgctctctcctt
ctgctacctgctgtcatctttcaagtttttgtacctttttagagaataga
tcacgtgttttccagctttcttttttttaacattgttcagtccacagagt
cgaacaataaattcaactataattgacagaggctttacacagaagatatt
gcatgcgttccattaagaacaatatctacttagaacatcattacctgcta
ctacctctccaacctttatattgagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_18053717_18054902
seq2: B6Ng01-320J21.g_67_1243 (reverse)

seq1  CTCTCAATA-AAAGTTTG--GAGTTAGTAGCAGGTAATGAATGTCTAGGT  47
      ||||||||| |||| |||  ||| ||||||||||||||||   |||| ||
seq2  CTCTCAATATAAAGGTTGGAGAGGTAGTAGCAGGTAATGATGTTCTAAGT  50

seq1  AGATAATTTGTCTTAATGGAAACGCATGCAAATATC-TCTGTTGTAAGCT  96
      |||| |||  ||||||||| ||||||||| |||||| |||||   |||| 
seq2  AGAT-ATTGTTCTTAATGG-AACGCATGC-AATATCTTCTGTGTAAAGCC  97

seq1  TCTTGTCCAATTTATAGTTTGAATTTA-TGTTCGAACTTCTGGTGGACTT  145
      || ||||  | |||||| ||||||||| |||||||   ||| |||||| |
seq2  TC-TGTC--AATTATAG-TTGAATTTATTGTTCGA--CTCT-GTGGAC-T  139

seq1  GAACAATGTT-AAAAAAAGAAAGCTTGGAAAACACGTGATCTATTCTCCT  194
      |||||||||| ||||||||||||| |||||||||||||||||||||||  
seq2  GAACAATGTTAAAAAAAAGAAAGC-TGGAAAACACGTGATCTATTCTC--  186

seq1  AAAAAAGGTACAAAAAACTTGGAAAGATGACAGCAGGTAGCAGAAGGAGA  244
       |||||||||| |||||||| |||||||||||||||||||||||||||||
seq2  TAAAAAGGTAC-AAAAACTT-GAAAGATGACAGCAGGTAGCAGAAGGAGA  234

seq1  GAGCAAAATTAGGAGGATGAAGAGGAGCATCAGTGTGGTGTAATTTAGAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAAATTAGGAGGATGAAGAGGAGCATCAGTGTGGTGTAATTTAGAA  284

seq1  GTTGAGAGAATAGAGTAACACAGAAGCTAAGAAAAATTATAATCAGATCA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGAGAATAGAGTAACACAGAAGCTAAGAAAAATTATAATCAGATCA  334

seq1  TATAGTATGACATGTTTCCC-TTATTTTAACTTTATTCTTAGAAACAAAG  393
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TATAGTATGACATGTTTCCCTTTATTTTAACTTTATTCTTAGAAACAAAG  384

seq1  ATTAGAATCTTAAAAAAAATAAAAGCATTCCTGAGGGCTACTTTTCTCTA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAATCTTAAAAAAAATAAAAGCATTCCTGAGGGCTACTTTTCTCTA  434

seq1  ACTGACAAGGGGTTAAATGAGCTCTCAGCCTTAGTGTCTGGCATGGAGGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACAAGGGGTTAAATGAGCTCTCAGCCTTAGTGTCTGGCATGGAGGA  484

seq1  CCTGTGGAGAAAATCACAAAGTACCTCTGTCCTTAATCCACTGCCCCTTA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGAGAAAATCACAAAGTACCTCTGTCCTTAATCCACTGCCCCTTA  534

seq1  TACTTCCACTCCCATTGTTAAGCAGCAGGTGTTACTTTGCCTAGAGGCCT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCACTCCCATTGTTAAGCAGCAGGTGTTACTTTGCCTAGAGGCCT  584

seq1  GCAGCTTCTGGCCTCAGAGTAATTTAGAGTCAAGACAAGTAAAGGGCTAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTTCTGGCCTCAGAGTAATTTAGAGTCAAGACAAGTAAAGGGCTAA  634

seq1  TATAGAAAGCAACCTTAGTCTCTCAGAAGACCATGTTTTATCCCCTCAGA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAAGCAACCTTAGTCTCTCAGAAGACCATGTTTTATCCCCTCAGA  684

seq1  CACACTTTCCCCTCAGCCACCTTCAAGGGAGAACCAGAGTCCCAGAGCTG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTTCCCCTCAGCCACCTTCAAGGGAGAACCAGAGTCCCAGAGCTG  734

seq1  TAGAAATTAAAAGCACTGCCTTCTCTTCCAGAGGTCCTGAGTTCAGTTCC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTAAAAGCACTGCCTTCTCTTCCAGAGGTCCTGAGTTCAGTTCC  784

seq1  CAGCAATCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCCCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCCCT  834

seq1  CTTTTGGTGTGTCTGAAGAGAGTGACAGTGGACTCACTAACATTGAACAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGTGTGTCTGAAGAGAGTGACAGTGGACTCACTAACATTGAACAA  884

seq1  ATGAATAAAGGAATAAACAAACAAGCAAGCAAGCAAATAAACAAATAAAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAAAGGAATAAACAAACAAGCAAGCAAGCAAATAAACAAATAAAT  934

seq1  AATTAGAACCAGAGCTCCTGAGCTGGTCTGTGAAAGGTTAATTTAATGTA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAACCAGAGCTCCTGAGCTGGTCTGTGAAAGGTTAATTTAATGTA  984

seq1  TGTGTTTGCCTCTAATTGAATAAATTGTTTAAAAACTCAGTAGTAGTTTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTGCCTCTAATTGAATAAATTGTTTAAAAACTCAGTAGTAGTTTT  1034

seq1  GTACCTCATGACTTATAAAATGCTAAACATAGATTCTAACCAAGTAGCTT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTCATGACTTATAAAATGCTAAACATAGATTCTAACCAAGTAGCTT  1084

seq1  ATCTTTGGGACCATTTGACCATATGCTAATGTAGCATCCTTTTTACAGAT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGGGACCATTTGACCATATGCTAATGTAGCATCCTTTTTACAGAT  1134

seq1  CTCTATGTAAGTGTTTCTCACTGCAGATGAAGCTTTTGAATTC  1186
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGTAAGTGTTTCTCACTGCAGATGAAGCTTTTGAATTC  1177