BAC Information

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BAC

Clone NameB6Ng01-321E11
Chromosome7 (Build37)
Map Location 136,266,532 - 136,267,355
singlet/doubletsinglet
Overlap geneLOC100043144
Upstream geneItgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030, Inpp5f, LOC100043651, 1110007A13Rik, Sec23ip, LOC210714
Downstream genePpapdc1a, Brwd2, LOC100043150
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321E11.g
ACCGA110431
length848
definitionB6Ng01-321E11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttggaattttgaaggtacgcagatgc
acagaaaccatcctcactcttggaagcataatccagtttctatgaacaaa
aagaaaaaccccataactgcacctaggaagagaaagattccagatttgag
ctttgctgagatgatttgatgagaaatgagcgtggctcattgtctcacta
ttggaacactgcattggaattgagatagccatctggattttgctttctct
gcctggatttttaatgacgttttgagtccggaatggccggagtagccgtc
tcgaccccgggcaaagagccaaccaatgccgtctgcatatggctgggggt
gaaagtcaagcctataaattatactgagggcttccatgctgccaggggtc
cggacctgactatttataaatgatcccctgatctatgagcagtgcatatt
atataggttttatcttgtaacctgatgcataagaaaccttctggccagcc
tgaagcattcaaaatagaaagacaatccactaggatttgccctgatctca
cgacctttgttttgagtgctctggtttttgtttgtttgtcttaatattct
ttgattcattcattcattcattcttcgtcctgcgacatcttttccaggcc
tactaatagagtcttgatctctgtctgtggattttcatcttatatcttat
tttcttactcagctgaagttgccttcttctaatcccccctcttcttttca
ttactttgatcttttaaaagttcactgacgtgtgatttatgctgtttggt
gaataatgaaaatcctaaggtagactgatccaccatgtgtgtgtgtgt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_136266532_136267355
seq2: B6Ng01-321E11.g_90_913

seq1  TTGGAATTTTGAAGCTACACTGATGCACAGAAACCAAGCTCACTCTTGGA  50
      |||||||||||||| ||| | |||||||||||||||  ||||||||||||
seq2  TTGGAATTTTGAAGGTACGCAGATGCACAGAAACCATCCTCACTCTTGGA  50

seq1  AGCAGAAAACATTTTCTAGGAAGAAAAAGAAAAACCCCATAGCTGCACCT  100
      |||| ||  || |||||| ||| |||||||||||||||||| ||||||||
seq2  AGCATAATCCAGTTTCTATGAACAAAAAGAAAAACCCCATAACTGCACCT  100

seq1  AGGAAGAGAGAGATTCCAGATTTGTGCTTTGCTGAGATGATTTGCTGTGT  150
      ||||||||| |||||||||||||| ||||||||||||||||||| || | 
seq2  AGGAAGAGAAAGATTCCAGATTTGAGCTTTGCTGAGATGATTTGATGAGA  150

seq1  AATGAGCGTGGCTCATTGTCTCACTATTGGAACACTGCATTGGAATTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGCGTGGCTCATTGTCTCACTATTGGAACACTGCATTGGAATTGAG  200

seq1  ATAGCCATCTGGATTTTGCTTTCTCTGCCTGGATTTTTAATGACGTTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATAGCCATCTGGATTTTGCTTTCTCTGCCTGGATTTTTAATGACGTTTTG  250

seq1  AGTCCGGAATGGCCGGAGTAGCCATCAAGACCCCGGTCAAAGAGCCAACC  300
      ||||||||||||||||||||||| ||  |||||||| |||||||||||||
seq2  AGTCCGGAATGGCCGGAGTAGCCGTCTCGACCCCGGGCAAAGAGCCAACC  300

seq1  AATGCCATCTGCATATGGCTGTGGGTGAAAGTCAAGCCTATAAATTATAC  350
      |||||| |||||||||||||| ||||||||||||||||||||||||||||
seq2  AATGCCGTCTGCATATGGCTGGGGGTGAAAGTCAAGCCTATAAATTATAC  350

seq1  TGAGGGCTTCCATGCTGCCAGGGGTCCAGTCCTGACTATTTATAAGTCAT  400
      ||||||||||||||||||||||||||| | ||||||||||||||| | ||
seq2  TGAGGGCTTCCATGCTGCCAGGGGTCCGGACCTGACTATTTATAAATGAT  400

seq1  CCCCTGATAGATGAGCAGTGCATATTATATAGGTTTTATCTTGTAACCTG  450
      ||||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGATCTATGAGCAGTGCATATTATATAGGTTTTATCTTGTAACCTG  450

seq1  ATGCATAAGAAACCTTCTGGCCAGCCTGAAGCATTCAAAATAGAAAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATAAGAAACCTTCTGGCCAGCCTGAAGCATTCAAAATAGAAAGACA  500

seq1  ATCCACTAGGATTTGCCCAAATCTCACGACCTTTGTTTTGAGTGCTCTGG  550
      ||||||||||||||||||  ||||||||||||||||||||||||||||||
seq2  ATCCACTAGGATTTGCCCTGATCTCACGACCTTTGTTTTGAGTGCTCTGG  550

seq1  TTTTTGTTTGTTTGTTTTAATATTCGTTGATTCATTCATTCATTCATTCT  600
      ||||||||||||||| ||||||||| ||||||||||||||||||||||||
seq2  TTTTTGTTTGTTTGTCTTAATATTCTTTGATTCATTCATTCATTCATTCT  600

seq1  TCTTCCTGCTTCATCTTTTCCAGGCCTACTAATAGAGTCTTGATCTCTGT  650
      || ||||||  |||||||||||||||||||||||||||||||||||||||
seq2  TCGTCCTGCGACATCTTTTCCAGGCCTACTAATAGAGTCTTGATCTCTGT  650

seq1  CTGTGGATTTTCATCTTATATCTTATTTTCTTACTCAGCTGAAGTTGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGATTTTCATCTTATATCTTATTTTCTTACTCAGCTGAAGTTGCCT  700

seq1  TCTTCTAATCCCCCCTCTTCTTTCCATTACTTTGATCTTTTAAAAGTTCA  750
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCTTCTAATCCCCCCTCTTCTTTTCATTACTTTGATCTTTTAAAAGTTCA  750

seq1  CTGAGGTGTGATTTAGGCTGTTTGGTGAATAATGAAAAGCCTAAGGTAGA  800
      |||| |||||||||| |||||||||||||||||||||| |||||||||||
seq2  CTGACGTGTGATTTATGCTGTTTGGTGAATAATGAAAATCCTAAGGTAGA  800

seq1  CTGATCCACCATGTGTGTGTGTGT  824
      ||||||||||||||||||||||||
seq2  CTGATCCACCATGTGTGTGTGTGT  824