BAC Information

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BAC

Clone NameB6Ng01-321J21
Chromosome7 (Build37)
Map Location 28,132,702 - 28,267,196
singlet/doubletdoublet
Overlap geneShkbp1, Spnb4, Blvrb, EG668045, Sertad3
Upstream geneNlrp9c, LOC100043195, Nlrp4a, Nlrp9a, V1re12, EG243881, LOC623830, Cyp2b19, Cyp2g1, LOC100043745, Cyp2a5, EG233005, EG330491, Cyp2a12, LOC100043199, Cyp2f2, Gm1450, Egln2, Rab4b, Mia1, Snrpa, Itpkc, Adck4, Numbl, Ltbp4
Downstream geneSertad1, Prx, Hipk4, Pld3, 2310022A10Rik, Akt2, Ttc9b, Map3k10, C030039L03Rik, Zfp60, LOC100043229, LOC100043233, 4933426I21Rik, Zfp59, 4732475C15Rik, Prkcz2, 1700049G17Rik, EG668175, LOC100043771, Zfp780b, C130069I09Rik, LOC100043772, Psmc4, LOC100043774, 9530053A07Rik, Fbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321J21.bB6Ng01-321J21.g
ACCGA110674GA110675
length393792
definitionB6Ng01-321J21.b B6Ng01-321J21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,266,804 - 28,267,196)(28,132,702 - 28,133,491)
sequence
atacaagttttaaacctttgtccacattcaacaaagtaaggtgacaagac
ccttgaagagaaagaaagaaagagagaaaagaaaggaaaagaaaagaatt
tctgcctctgataagcaacttgatcagggtgagatgtcagagtcctaggg
agagggggcctgtctccttagtggtctgtgggaggtgactctggggcagg
gacttatcttgagagagagagagagagagactgagagagagagtcagaga
gagagagacactgaaagagagagagagactgggccttgaaaaatgaaact
agaggctaagccaccgggcttggcaggcaagagaaacgaggaaacctcgc
cagctgaggagggagggaggcagagagggagggaaggaggatg
gaattcactatgtaaagcaggctggcttcaaactcacggagatccccctg
cctctgtcatccgagtgttggagagattcccagaaactaaatagaccatc
ataaagaacacgagtagaacagagcttcagcgttgtacacgcagtggccc
tgggcaatgcacttgtgtcccatataggagcacaaattgatgttaaacct
atgagacagagacgaaccgaggggctagcctgtgatcccagcactcatga
gcctgaagcagaaagatgaggtgttctggagttagaggctagcctgaact
acagggaaagatcttgtcctccccataaagaaaaagaagaggaaaaaaaa
aaatcaaggctcctggaacatggaattatctactatctgaaaggtatcca
ggtctttatgaattaggcaaatgtcgtgtcctgacaggagacaggtaaga
tgcaagaggcaggcttgtcatgaaaaggccaaaagcagcccagcacctaa
aacagagctaagtaaagcaaaccagaagcacgtgctgcaggaataagaac
tgatgtcccgttcctgaggagtgccgtcgagacacagagctacggctacg
gctacgtctggctggccacagcagggcaagaaactttgtcatagcttact
ggtcttgggggtgaggtagacgctgagggcggtgaccccatcctctgctg
ggtctcggtagagctcactgacaaggagatcgttgtccttcatccgcagg
gggaatttctgcacatctagatgggcaggcagggggtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_28266804_28267196
seq2: B6Ng01-321J21.b_53_445 (reverse)

seq1  CATCCTCCTTCCCTCCCTCTCTGCCTCCCTCCCTCCTCAGCTGGCGAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCCTTCCCTCCCTCTCTGCCTCCCTCCCTCCTCAGCTGGCGAGGT  50

seq1  TTCCTCGTTTCTCTTGCCTGCCAAGCCCGGTGGCTTAGCCTCTAGTTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCGTTTCTCTTGCCTGCCAAGCCCGGTGGCTTAGCCTCTAGTTTCA  100

seq1  TTTTTCAAGGCCCAGTCTCTCTCTCTCTTTCAGTGTCTCTCTCTCTCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAAGGCCCAGTCTCTCTCTCTCTTTCAGTGTCTCTCTCTCTCTGA  150

seq1  CTCTCTCTCTCAGTCTCTCTCTCTCTCTCTCTCAAGATAAGTCCCTGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCAGTCTCTCTCTCTCTCTCTCTCAAGATAAGTCCCTGCCC  200

seq1  CAGAGTCACCTCCCACAGACCACTAAGGAGACAGGCCCCCTCTCCCTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCACCTCCCACAGACCACTAAGGAGACAGGCCCCCTCTCCCTAGG  250

seq1  ACTCTGACATCTCACCCTGATCAAGTTGCTTATCAGAGGCAGAAATTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGACATCTCACCCTGATCAAGTTGCTTATCAGAGGCAGAAATTCTT  300

seq1  TTCTTTTCCTTTCTTTTCTCTCTTTCTTTCTTTCTCTTCAAGGGTCTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCCTTTCTTTTCTCTCTTTCTTTCTTTCTCTTCAAGGGTCTTGT  350

seq1  CACCTTACTTTGTTGAATGTGGACAAAGGTTTAAAACTTGTAT  393
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTACTTTGTTGAATGTGGACAAAGGTTTAAAACTTGTAT  393

seq1: chr7_28132702_28133491
seq2: B6Ng01-321J21.g_68_858

seq1  GAATTCACTATGTAAAGCAGGCTGGCTTCAAACTCACGGAGATCCCCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTAAAGCAGGCTGGCTTCAAACTCACGGAGATCCCCCTG  50

seq1  CCTCTGTCATCCGAGTGTTGGAGAGATTCCCAGAAACTAAATAGACCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTCATCCGAGTGTTGGAGAGATTCCCAGAAACTAAATAGACCATC  100

seq1  ATAAAGAACACGAGTAGAACAGAGCTTCAGCGTTGTACACGCAGTGGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAACACGAGTAGAACAGAGCTTCAGCGTTGTACACGCAGTGGCCC  150

seq1  TGGGCAATGCACTTGTGTCCCATATAGGAGCACAAATTGATGTTAAACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAATGCACTTGTGTCCCATATAGGAGCACAAATTGATGTTAAACCT  200

seq1  ATGAGACAGAGACGAACCGAGGGGCTAGCCTGTGATCCCAGCACTCATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACAGAGACGAACCGAGGGGCTAGCCTGTGATCCCAGCACTCATGA  250

seq1  GCCTGAAGCAGAAAGATGAGGTGTTCTGGAGTTAGAGGCTAGCCTGAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAGCAGAAAGATGAGGTGTTCTGGAGTTAGAGGCTAGCCTGAACT  300

seq1  ACAGGGAAAGATCTTGTCCTCCCCATAAAGAAAAAGAAGAGGAAAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGAAAGATCTTGTCCTCCCCATAAAGAAAAAGAAGAGGAAAAAAAA  350

seq1  AAATCAAGGCTCCTGGAACATGGAATTATCTACTATCTGAAAGGTATCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAGGCTCCTGGAACATGGAATTATCTACTATCTGAAAGGTATCCA  400

seq1  GGTCTTTATGAATTAGGCAAATGTCGTGTCCTGACAGGAGACAGGTAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTATGAATTAGGCAAATGTCGTGTCCTGACAGGAGACAGGTAAGA  450

seq1  TGCAAGAGGCAGGCTTGTCATGAAAAGGCCAAAAGCAGCCCAGCACCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGAGGCAGGCTTGTCATGAAAAGGCCAAAAGCAGCCCAGCACCTAA  500

seq1  AACAGAGCTAAGTAAAGCAAACCAGAAGCACGTGCTGCAGGAATAAGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGCTAAGTAAAGCAAACCAGAAGCACGTGCTGCAGGAATAAGAAC  550

seq1  TGATGTCCCGTTCCTGAGGAGTGCCGTCGAGACACAGAGCTACGGCTACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCCCGTTCCTGAGGAGTGCCGTCGAGACACAGAGCTACGGCTACG  600

seq1  GCTACGTCTGGCTGGCCACAGCAGGGCAAGAAACTTTGTCATAGCTTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACGTCTGGCTGGCCACAGCAGGGCAAGAAACTTTGTCATAGCTTACT  650

seq1  GGTCTTGGGGGTGAGGTAGACGCTGAGGGCGGTGACCCCATCCTCTGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTGGGGGTGAGGTAGACGCTGAGGGCGGTGACCCCATCCTCTGCTG  700

seq1  GGTCTCGGTAGAGCTCACTGACAAGGAGATCGTTGTCCTTCATCCGCAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCGGTAGAGCTCACTGACAAGGAGATCGTTGTCCTTCATCCGCAGG  750

seq1  GGGAATTTCTGCACATCTAGATGGGCAGGCA-GGGGTGGGG  790
      ||||||||||||||||||||||||||||||| |||||||||
seq2  GGGAATTTCTGCACATCTAGATGGGCAGGCAGGGGGTGGGG  791