BAC Information

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BAC

Clone NameB6Ng01-321P17
Chromosome7 (Build37)
Map Location 89,950,892 - 89,952,057
singlet/doubletsinglet
Overlap genenone
Upstream geneBtbd1, Tm6sf1, LOC100043161, Hdgfrp3, Bnc1, Sh3gl3, Adamtsl3, 1700129I04Rik, Eftud1
Downstream geneLOC100038986, LOC619808, Rkhd3, LOC619909, A530021J07Rik, EG666160, Tmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321P17.bB6Ng01-321P17.g
ACCGA110946GA110947
length1,163915
definitionB6Ng01-321P17.b B6Ng01-321P17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctctgcctcccagttctaatgccccactcaccataccaacccc
actgctagacacacagccaaggagcctgacacccatctttgataccactc
ccaggctagacttgccatttgtagagcccaagctcctggccggcaggcag
ggcagacactatggaggcagatctttacctctagcagggtttgggctcct
gttttgatccctttactcacacagctaggtttggatttgtttttggaact
ctgatgttccactatttaagaactagtatgagggccagagcagtggctca
ggggttaagagcactcactgctcttccagcagacctggttttggtttcca
gcacccatgttccctgcagaaagggaagacatagtgggtgggctcacaac
catgtcctgctccagttctagggcatctgatgcctccttagcaccaggca
cacacaagtactgctcatatatacaggcaaaactccactcacataaaata
aaattaaaataaaaaagaatcaataaagtggtccatattgatgtgcaaat
attttccgaagggttaaggtgccagagaatgaaccccttggctcatcagt
tttctttacgttgaactctgggcagcagtaatttgtgcttagggactggc
ttgggtagtgctgtagtctggatgctgaatgtccctgaaatgctcaggtg
ttggagcttggccaccagcctggggtactattgggagagatggtaagttg
ggtcgatgagaagataccctcgatgggaatatcagggcaccagctctctc
tctctctctccatcttagctgttagaggtgatcagccatatgtttcccat
taagatattctgtgctgccacaggcccaaaagccacacagccaacgaagc
acagactgaaactgatggcaaataaattgttcttcctcataagttgttta
tctaaaggtatttttgccacagttaatggaaaacagaatgacacagaata
ggttggatgagctgtctagtggggaggaggtcaggagtgactccgaagag
agggaagactaggggttcagaaccaatgacaagcttctggaaaacgatgt
acttccccagagaagtgaacacgactcacaaaaagaatcgtatcacttgg
ctgacatcgaatt
gaattcatgggtatagcttctgacgtacctaggagacacagtttcacacc
aaactctgttcctctggttcttgcattctttacacatcctgcaatgatcc
tcaagccttgggtgcaggagttgccttatagatccattggaactgagctc
cacaagtctgcattttgattggttgtgattttatgtgatggtgtctgcct
ttgcagagaagtttctttaatgagcattaaggactacactttcctgtggg
tctaaagacaaatatttagtataaagaaagtgtattggttacttcctcca
gctcctccattgtggaccctgtgatccatccaatagctgactgtgagcat
ccacttctgtgtttgctaggccccggcatagtctcacaagagacagctat
atcagggtcctttcagcaaaaccttgctagtgtatgcaatggtgtcaacg
tttggaggctgattatgggatggatccccgggtatggcagtctctagatg
gtccatcctttcgtgtcagctccaaactctgtctctgtagctcccttctt
gggtgccttgctcccaattccaagaaggggcaaagtatccacaccttggt
cttcgttcttcccgagcttcatgtgtttcaaaaattgtatcttatatctt
aggtattctaagtttctgggctaatatccacttatcagtgaggagctgga
ggaagtacccaggaatctggggggatctgcaaccctataggtggaacaac
aatatgaactaaccagtaaccagtaccccccccccctccccagagcgcat
gtctctagctgcatatgtatcagaagatggcctggttagccatcagtgga
aagagaggtccattggtcatgcagactttatatgcctcagtacaggggaa
cgccagggccaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_89950892_89952057
seq2: B6Ng01-321P17.b_48_1210 (reverse)

seq1  AATTCTGATGTCAGCAGAGTGAATTATGGTATCTTTTTGTGAGTCGGTGT  50
      ||||| |||||||||  |||||  || | | |||||||||||||| ||| 
seq2  AATTC-GATGTCAGCCAAGTGA--TACGAT-TCTTTTTGTGAGTC-GTG-  44

seq1  TTCACTTTCTCTGGGGAGTTCCTTCCTTTTTCCCAGAGGCTTGTCA-TGT  99
      ||||| |||||||||||  | | || ||||  ||||| |||||||| || 
seq2  TTCAC-TTCTCTGGGGAAGTACATCGTTTT--CCAGAAGCTTGTCATTGG  91

seq1  GTCTG-ACCCCTAGGTCTTCCCTCTCTTCGGGGTCACT-CTGACCTTCCT  147
       |||| ||||||| ||||||||||||||||| |||||| ||||||| |  
seq2  TTCTGAACCCCTA-GTCTTCCCTCTCTTCGGAGTCACTCCTGACCTCCTC  140

seq1  CCCACTAGACAGCTCATCCAACCTA-TCTGTGTCATTCTGTTTTCCATT-  195
      ||||||||||||||||||||||||| ||||||||||||||||||||||| 
seq2  CCCACTAGACAGCTCATCCAACCTATTCTGTGTCATTCTGTTTTCCATTA  190

seq1  ACTGTGGCAAAAATACC-TTAGATAAACAACTTATGAGGAAGAACAATTT  244
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACTGTGGCAAAAATACCTTTAGATAAACAACTTATGAGGAAGAACAATTT  240

seq1  ATTTGCCATCAGTTTCAGTCTGTGCTTCGTTGGCTGTGTGGCTTTTGGGC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCATCAGTTTCAGTCTGTGCTTCGTTGGCTGTGTGGCTTTTGGGC  290

seq1  CTGTGGCAGCACAGAATATCTTAATGGG-AACATATGGCTGATCACCTCT  343
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTGTGGCAGCACAGAATATCTTAATGGGAAACATATGGCTGATCACCTCT  340

seq1  AACAGCTAAGATGGAGAGAGAGAGAGAGAGCTGGTGCCCTGATATTCCCA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTAAGATGGAGAGAGAGAGAGAGAGCTGGTGCCCTGATATTCCCA  390

seq1  TCGAGGGTATCTTCTCATCGACCCAACTTACCATCTCTCCCAATAGTACC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGGGTATCTTCTCATCGACCCAACTTACCATCTCTCCCAATAGTACC  440

seq1  CCAGGCTGGTGGCCAAGCTCCAACACCTGAGCATTTCAGGGACATTCAGC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGGTGGCCAAGCTCCAACACCTGAGCATTTCAGGGACATTCAGC  490

seq1  ATCCAGACTACAGCACTACCCAAGCCAGTCCCTAAGCACAAATTACTGCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGACTACAGCACTACCCAAGCCAGTCCCTAAGCACAAATTACTGCT  540

seq1  GCCCAGAGTTCAACGTAAAGAAAACTGATGAGCCAAGGGGTTCATTCTCT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGAGTTCAACGTAAAGAAAACTGATGAGCCAAGGGGTTCATTCTCT  590

seq1  GGCACCTTAACCCTTCGGAAAATATTTGCACATCAATATGGACCACTTTA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCTTAACCCTTCGGAAAATATTTGCACATCAATATGGACCACTTTA  640

seq1  TTGATTCTTTTTTATTTTAATTTTATTTTATGTGAGTGGAGTTTTGCCTG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCTTTTTTATTTTAATTTTATTTTATGTGAGTGGAGTTTTGCCTG  690

seq1  TATATATGAGCAGTACTTGTGTGTGCCTGGTGCTAAGGAGGCATCAGATG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGAGCAGTACTTGTGTGTGCCTGGTGCTAAGGAGGCATCAGATG  740

seq1  CCCTAGAACTGGAGCAGGACATGGTTGTGAGCCCACCCACTATGTCTTCC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGAACTGGAGCAGGACATGGTTGTGAGCCCACCCACTATGTCTTCC  790

seq1  CTTTCTGCAGGGAACATGGGTGCTGGAAACCAAAACCAGGTCTGCTGGAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGCAGGGAACATGGGTGCTGGAAACCAAAACCAGGTCTGCTGGAA  840

seq1  GAGCAGTGAGTGCTCTTAACCCCTGAGCCACTGCTCTGGCCCTCATACTA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTGAGTGCTCTTAACCCCTGAGCCACTGCTCTGGCCCTCATACTA  890

seq1  GTTCTTAAATAGTGGAACATCAGAGTTCCAAAAACAAATCCAAACCTAGC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTAAATAGTGGAACATCAGAGTTCCAAAAACAAATCCAAACCTAGC  940

seq1  TGTGTGAGTAAAGGGATCAAAACAGGAGCCCAAACCCTGCTAGAGGTAAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAGTAAAGGGATCAAAACAGGAGCCCAAACCCTGCTAGAGGTAAA  990

seq1  GATCTGCCTCCATAGTGTCTGCCCTGCCTGCCGGCCAGGAGCTTGGGCTC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCCTCCATAGTGTCTGCCCTGCCTGCCGGCCAGGAGCTTGGGCTC  1040

seq1  TACAAATGGCAAGTCTAGCCTGGGAGTGGTATCAAAGATGGGTGTCAGGC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATGGCAAGTCTAGCCTGGGAGTGGTATCAAAGATGGGTGTCAGGC  1090

seq1  TCCTTGGCTGTGTGTCTAGCAGTGGGGTTGGTATGGTGAGTGGGGCATTA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGCTGTGTGTCTAGCAGTGGGGTTGGTATGGTGAGTGGGGCATTA  1140

seq1  GAACTGGGAGGCAGAGGGAATTC  1166
      |||||||||||||||||||||||
seq2  GAACTGGGAGGCAGAGGGAATTC  1163