BAC Information

Click to search

BAC

Clone NameB6Ng01-322D16
Chromosome7 (Build37)
Map Location 54,472,762 - 54,473,883
singlet/doubletsinglet
Overlap genenone
Upstream geneUsh1c, Otog, Myod1, Kcnc1, Sergef, Tph1, Saal1, Saa3, Saa4, LOC100040106, Saa1, Saa2, Hps5, Gtf2h1, EG668838, EG384622, Ldha, Ldhc, Tsg101, Uevld, C86187, LOC384623, ENSMUSG00000056509, Spty2d1, LOC100040174, Tmem86a, Ptpn5, LOC100041710, Mrgpra6
Downstream geneEG668725, Gm660, Mrgpra1, LOC668846, LOC100040217, LOC668727, Mrgpra2, LOC638950, Mrgprc4-ps, LOC677457, EG668729, Mrgpra3, Mrgprc1-ps, LOC100040314, Mrgprc3-ps, EG435977, EG619792, Mrgprc7-ps, Mrgpra18-ps, EG435978, Mrgprc2-ps, Mrgpra4, Mrgprx1, Mrgprb7-ps, Mrgprb12-ps, EG270335, Mrgprb5, Mrgprb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322D16.bB6Ng01-322D16.g
ACCGA111125GA111126
length1,2211,134
definitionB6Ng01-322D16.b B6Ng01-322D16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacataacatgataaaagcaatctacagcaaaccag
tagccaacatcaaagtaaatggtgagaagcttgaagcaatcccactaaaa
tcagggacaagacaaggctacccactttccctctacctattcaatatagt
acttaaaatcccagccagagcaattagacaacaaaaggagatcaaggaga
tacaaattggaaaggaagacgtcaaaatatcactatttgcggattatatg
atagtatatataactgaccctaaaaattccaccagagaactcctaaacct
gataaacagcttcattgaagtatctgggtataaaattaactcaaacaaat
caatggcctttctctacacaaaggataaacaggctgagaaagaaattagg
gaaacaacacccttctcaatagtcacaaataatataaaataccttggtgt
gactcttaactaaggaagtgaaagatctgtatgataagaacttcaagtct
ctagagaaagaaattaaagatctcagaagatggaaagatctcccatgctc
atggattggcaggatcaacattgtaaaaatggctatcttgacaaaagcaa
tctacagattcaatgcaatccccatcaaaatttcaactcaattcttcaat
gaattagaaagggcaatttgcaaattcatctggaataacaaaaaacctag
gatagcaaaaagtcttctcaatgaacctctggtggaatcaccatgcctga
cctaaagctgtactacagagcaattgtgataaaaacctgtatgatactgg
tatagcgacagaaaagtagagcaatggaatagaattgaagacctagaaat
gaagccacacacctatggtcacttgatctttgacaagggagctaaaacaa
accagtggaaaaaagacagcatttacaacaaatggtgctggcacaactgg
cagttatcatgtagaagaattatgaattgatccattcctatctccttgta
ctaaggtcaatcctaggggatcaaggaactccacataaaaccagagacac
tgaagcttatagaggagaagtgtgcaaaggcctcaagatggtgggcacaa
gggaaatcctgaattagaaacatccattggcttgtgctgttagattcaga
attcacaggcttctgtaggcaagacacactgttcattagaccaatggcaa
cccaccagatttgtgggcagt
gaattcttcacagggatatttctggatgacttcccagtttccactcatat
gtgagcctttcccacccctccttatctggttatctgcctacttctgtaag
taagtgccattgtgaagctttaattgccaactatgagcctaggcagtaat
gatgttggctaaaatgagctccatgtgagatttataactaaagtacattg
tggtgtctctagagcatcctcatggcctggctttttttcttccccatttt
ctccacctgataactgactcataggtgttcttttatcgtaactgacagac
aagtgcacacacagtgaacttctccccgagtcccactctccacatgtcat
gtttgtactttttctttcattgtttttttttttaaattctctgaatagta
aagttatacttctgtttttagttattcatgttgaaagttgaatcaacaga
atattttattataaaccagagtttaacctatgtagtgtatattgcctcca
tacatgaaatttattacttacctatttttgtgtggtataaatagtaacat
ttacgagggttatttatctcttatggtctcttttcttgagtcacactata
taaccagattctgctatttgccgtctagtaatgttatttaaaagtcagtc
tgttttatgtacatagaagattatttattggattttttttcttctacaga
acacaaaacactgatttgtgttcttcccaaacttgctggatctattttca
ttatttgtatgtgtatggtttcagggttgaccactcttcaatggacagcc
caataaggggtcatccctgggatggtctaattctctttctcacagtaatt
cttaggttgcccatgttgtttaggggtgggacctagtgaaaatttccctt
ccacacttacatgtccatttacttttgcctatgtcctcttgcttatttag
ctgtttcaggaagagacagctttaacagccagacttcctggtattctggc
acttaaaatctttatgccttcttccatgatactcctatgcgtcatagaat
gaaggagctatgatgtagaatgtattcatggttctgtgctttcccatcat
tctgttatctcctgcaatcaatgcaatccagttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_54472762_54473883
seq2: B6Ng01-322D16.g_65_1198

seq1  GAATTCTTCACAGGGATATTTCTGGATGACTTCCCAGTTTCCACTCATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCACAGGGATATTTCTGGATGACTTCCCAGTTTCCACTCATAT  50

seq1  GTGAGCCTTTCCCACCCCTCCTTATCTGGTTATCTGCCTACTTCTGTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCTTTCCCACCCCTCCTTATCTGGTTATCTGCCTACTTCTGTAAG  100

seq1  TAAGTGCCATTGTGAAGCTTTAATTGCCAACTATGAGCCTAGGCAGTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGCCATTGTGAAGCTTTAATTGCCAACTATGAGCCTAGGCAGTAAT  150

seq1  GATGTTGGCTAAAATGAGCTCCATGTGAGATTTATAACTAAAGTACATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTGGCTAAAATGAGCTCCATGTGAGATTTATAACTAAAGTACATTG  200

seq1  TGGTGTCTCTAGAGCATCCTCATGGCCTGGCTTTTTTTCTTCCCCATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTCTCTAGAGCATCCTCATGGCCTGGCTTTTTTTCTTCCCCATTTT  250

seq1  CTCCACCTGATAACTGACTCATAGGTGTTCTTTTATCGTAACTGACAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCTGATAACTGACTCATAGGTGTTCTTTTATCGTAACTGACAGAC  300

seq1  AAGTGCACACACAGTGAACTTCTCCCCGAGTCCCACTCTCCACATGTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCACACACAGTGAACTTCTCCCCGAGTCCCACTCTCCACATGTCAT  350

seq1  GTTTGTACTTTTTCTTTCATTGTTTTTTTTTTTAAATTCTCTGAATAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTACTTTTTCTTTCATTGTTTTTTTTTTTAAATTCTCTGAATAGTA  400

seq1  AAGTTATACTTCTGTTTTTAGTTATTCATGTTGAAAGTTGAATCAACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATACTTCTGTTTTTAGTTATTCATGTTGAAAGTTGAATCAACAGA  450

seq1  ATATTTTATTATAAACCAGAGTTTAACCTATGTAGTGTATATTGCCTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATTATAAACCAGAGTTTAACCTATGTAGTGTATATTGCCTCCA  500

seq1  TACATGAAATTTATTACTTACCTATTTTTGTGTGGTATAAATAGTAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGAAATTTATTACTTACCTATTTTTGTGTGGTATAAATAGTAACAT  550

seq1  TTACGAGGGTTATTTATCTCTTATGGTCTCTTTTCTTGAGTCACACTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGAGGGTTATTTATCTCTTATGGTCTCTTTTCTTGAGTCACACTATA  600

seq1  TAACCAGATTCTGCTATTTGCCGTCTAGTAATGTTATTTAAAAGTCAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAGATTCTGCTATTTGCCGTCTAGTAATGTTATTTAAAAGTCAGTC  650

seq1  TGTTTTATGTACATAGAAGATTATTTATTGGATTTTTTTTCTTCTACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATGTACATAGAAGATTATTTATTGGATTTTTTTTCTTCTACAGA  700

seq1  ACACAAAACACTGATTTGTGTTCTTCCCAAACTTGCTGGATCTATTTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAACACTGATTTGTGTTCTTCCCAAACTTGCTGGATCTATTTTCA  750

seq1  TTATTTGTATGTGTATGGTTTCAGGGTTGACCACTCTTCAATGGACAG-C  799
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTATTTGTATGTGTATGGTTTCAGGGTTGACCACTCTTCAATGGACAGCC  800

seq1  CAATAAGGGGTCATCCCTGGGATGGTCTAATTCTCTTTCTCACAGTAATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGGGGTCATCCCTGGGATGGTCTAATTCTCTTTCTCACAGTAATT  850

seq1  CTTA-GTTGCCCATGTTGTTTAGGGGTGGGACCTAGTGAAAATTTCCCTT  898
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGTTGCCCATGTTGTTTAGGGGTGGGACCTAGTGAAAATTTCCCTT  900

seq1  CCACACTTACATGTCCA-TTACTTTTGCTATTGTCCTCTTGCTTATTTAG  947
      ||||||||||||||||| ||||||||||   |||||||||||||||||||
seq2  CCACACTTACATGTCCATTTACTTTTGCCTATGTCCTCTTGCTTATTTAG  950

seq1  CTGTTTCAGG-AGAGACAGC-TTCACAG-CAGACTTCCTGGTATTCTGGC  994
      |||||||||| ||||||||| || |||| |||||||||||||||||||||
seq2  CTGTTTCAGGAAGAGACAGCTTTAACAGCCAGACTTCCTGGTATTCTGGC  1000

seq1  ACTTAAAATCTTTATGCCCTCTTCCATGATACT-CTATGCGTCATAG-AT  1042
      |||||||||||||||||| |||||||||||||| ||||||||||||| ||
seq2  ACTTAAAATCTTTATGCCTTCTTCCATGATACTCCTATGCGTCATAGAAT  1050

seq1  GAAGGAGCTATGATGTAG-ATGTATTCATGGGTCTGTGC-TTCCCATCA-  1089
      |||||||||||||||||| |||||||||||| ||||||| ||||||||| 
seq2  GAAGGAGCTATGATGTAGAATGTATTCATGGTTCTGTGCTTTCCCATCAT  1100

seq1  TCTGTTAATCT-CTGCATTCATTGC-ATCCAGTTG  1122
      |||||| |||| ||||| ||| ||| |||||||||
seq2  TCTGTT-ATCTCCTGCAATCAATGCAATCCAGTTG  1134