BAC Information

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BAC

Clone NameB6Ng01-322D17
Chromosome7 (Build37)
Map Location 106,274,957 - 106,411,385
singlet/doubletdoublet
Overlap geneUvrag, Dgat2, Mogat2
Upstream geneCapn5, Omp, B3gnt6, Phca, Tsku, LOC100040269, Gucy2d, LOC100040721, EG434215, A630091E08Rik, 2210018M11Rik, LOC100040769, Prkrir, Wnt11, LOC666978, EG666529
Downstream geneMtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322D17.bB6Ng01-322D17.g
ACCGA111127GA111128
length1,068876
definitionB6Ng01-322D17.b B6Ng01-322D17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,274,957 - 106,276,015)(106,410,781 - 106,411,385)
sequence
gaattcactctacagcccaggctcaagctcttgatcctcttgcctcagat
gccccttcaaggtctacagatttgttccccagagtgatgcttttaaaagg
cagcgggacaccccccctccagggcctccccttcctcttctgagtctcca
ggtgtgcggctcttccctacaggaagtgctccctgccatgatctgcagca
tcaccatggaccaaaagccacctgaccacacactaagctctcggaatatt
tcgctcctctttcaaagctgattatcttaagtatgttacagtaacgtgaa
gctaactgacgcagagtaaagtatggctcctatcagagaaaaactgcaac
gaactttaaatatacacaccggtggttaagttatggatcctatagtgaaa
aatactgcacagccatgaagaataaataatgtagtgtcgatgaaacaagt
caagaaactactagtcttcaatagtttgtatggtgcctgtgttgtcattt
gcacttcacagagagaaaagaatgcaatgctgtgatggctggagaggttt
aagtataaatacttgccccaggaggggggggtggggactgcacacgatat
ctttacgcattacacaaaatcttatacacattttacatgagaaagcatag
gaatatattccctacttttaaataaaaaaataaatttacattaaaaaaaa
agacaaaaagtccatcggtagtggcgcccacctttgatcccagcactggc
gaggctaaggcaagtggctctctgtgagttctaagccagactagtataca
gataagagttccagggaagccaggctaaacagagaaaccttgtcttgtgg
ggaaagaaaagtgaagagggcaataaatcttctttgttaaatttatttat
ttgttattttacatgcattgatgttttgcctgcatgtgtgtctgtgtgag
ggttgtcagaatcttagagttaacagttgtgagcttgccttggaggactg
ggaatttgaacccacattcctccagaagagcatcagtgctctttaactgc
tgaaccattgttgggttg
gaattcaggcccccagaacttacgtaaaagttaggcatagctgcatgtgt
ctgctaccccaacactgggggtggagacaggtgaacaaaaacagttaaga
gttgtgtatttcattttatgagtatgggtgttttgcctgcttgtatgtac
acgtatcgttggttcccctggaactggagttacaaatggttgcgaaccat
catatagggatgaggaactgagcctgggttctctgcaagagcagcaagtg
ctgctatccagtgaaccatctcttcagctataacaaatggctctttaagg
gactgtccctccgccgatgttctcataagttttttttttaagatttattt
atttatttatttatttatttattatatgtaagtacattgtagctgtcttc
agacactccagaagaaggagtcagatctcattacggatggttgtgagcca
ccatgtggttgctgggatttgaactctggaccttcggaagagcagtcggg
tgctctaacccactgagccatctcaccagcccctcataagttttatatag
gtactttttttttttttctgccctggctgtcctggaactcactatgtaaa
ccaagctggccaccaactcacagagatcctcctgtctctgcctcctaagt
gctgagatgaaagacattttaaaaaaagaaaaagaaaaaaaaaaaaaaag
aaaagggaaaggaaaaagaaggcatgtatgtgtgtatctgtgtacatgga
tgcaggagtatatagaggccagcagagggcatcagatctcctggcggtag
ctttacaggtgcttgtgagctgcctgacgtgggggctgggaactgctgga
gcccactgcaaaggcagtatgtgctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_106274957_106276015
seq2: B6Ng01-322D17.b_48_1114

seq1  GAATTCACTCTACAGCCCAGGCTCAAGCTCTTGATCCTCTTGCCTCAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTACAGCCCAGGCTCAAGCTCTTGATCCTCTTGCCTCAGAT  50

seq1  GCCCCTTCAAGGTCTACAGATTTGTTCCCCAGAGTGATGCTTTTAAAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTTCAAGGTCTACAGATTTGTTCCCCAGAGTGATGCTTTTAAAAGG  100

seq1  CAGCGGGACACCCCCCCTCCAGGGCCTCCCCTTCCTCTTCTGAGTCTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGGGACACCCCCCCTCCAGGGCCTCCCCTTCCTCTTCTGAGTCTCCA  150

seq1  GGTGTGCGGCTCTTCCCTACAGGAAGTGCTCCCTGCCATGATCTGCAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCGGCTCTTCCCTACAGGAAGTGCTCCCTGCCATGATCTGCAGCA  200

seq1  TCACCATGGACCAAAAGCCACCTGACCACACACTAAGCTCTCGGAATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATGGACCAAAAGCCACCTGACCACACACTAAGCTCTCGGAATATT  250

seq1  TCGCTCCTCTTTCAAAGCTGATTATCTTAAGTATGTTACAGTAACGTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTCCTCTTTCAAAGCTGATTATCTTAAGTATGTTACAGTAACGTGAA  300

seq1  GCTAACTGACGCAGAGTAAAGTATGGCTCCTATCAGAGAAAAACTGCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACTGACGCAGAGTAAAGTATGGCTCCTATCAGAGAAAAACTGCAAC  350

seq1  GAACTTTAAATATACACACCGGTGGTTAAGTTATGGATCCTATAGTGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTAAATATACACACCGGTGGTTAAGTTATGGATCCTATAGTGAAA  400

seq1  AATACTGCACAGCCATGAAGAATAAATAATGTAGTGTCGATGAAACAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGCACAGCCATGAAGAATAAATAATGTAGTGTCGATGAAACAAGT  450

seq1  CAAGAAACTACTAGTCTTCAATAGTTTGTATGGTGCCTGTGTTGTCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAACTACTAGTCTTCAATAGTTTGTATGGTGCCTGTGTTGTCATTT  500

seq1  GCACTTCACAGAGAGAAAAGAATGCAATGCTGTGATGGCTGGAGAGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCACAGAGAGAAAAGAATGCAATGCTGTGATGGCTGGAGAGGTTT  550

seq1  AAGTATAAATACTTGCCCCAGGAGGGGGGGGTGGGGACTGCACACGATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATAAATACTTGCCCCAGGAGGGGGGGGTGGGGACTGCACACGATAT  600

seq1  CTTTACGCATTACACAAAATCTTATACACATTTTACATGAGAAAGCATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACGCATTACACAAAATCTTATACACATTTTACATGAGAAAGCATAG  650

seq1  GAATATATTCCCTACTTTTAAATAAAAAAATAAATTTACATTAAAAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATATTCCCTACTTTTAAATAAAAAAATAAATTTACATTAAAAAAAA  700

seq1  AGACAAAAAGTCCATCGGTAGTGGCGCCCACCTTTGATCCCAGCACTGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAAAGTCCATCGGTAGTGGCGCCCACCTTTGATCCCAGCACTGGC  750

seq1  GAGGCTAAGGCAAGTGGCTCTCTGTGAGTTCTAAGCCAGACTAGTATACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTAAGGCAAGTGGCTCTCTGTGAGTTCTAAGCCAGACTAGTATACA  800

seq1  GATAAGAGTTCCAGGGAAGCCAGGCTAAACAGAGAAACCTTGTCTTGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGAGTTCCAGGGAAGCCAGGCTAAACAGAGAAACCTTGTCTTGTGG  850

seq1  GGAAAGAAAAGTGAAGAGGGCAATAAATC-TCTTTGTTAAA-TTATTTA-  897
      ||||||||||||||||||||||||||||| ||||||||||| ||||||| 
seq2  GGAAAGAAAAGTGAAGAGGGCAATAAATCTTCTTTGTTAAATTTATTTAT  900

seq1  TTGTTATTTTACATGCATTGATGTTTTGCCTGCATGTGTGTCTGTGTGAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATTTTACATGCATTGATGTTTTGCCTGCATGTGTGTCTGTGTGAG  950

seq1  GGTTGTCAG-ATCTTAGAGTTAACAGTTGTGAGC-TGCCCTGGAGGACTG  995
      ||||||||| |||||||||||||||||||||||| |||| ||||||||||
seq2  GGTTGTCAGAATCTTAGAGTTAACAGTTGTGAGCTTGCCTTGGAGGACTG  1000

seq1  GGAA-TTGAACCCACA-TCCTCCAGAAGAGCAGCCAGTGCTC-TTAACTG  1042
      |||| ||||||||||| |||||||||||||||  |||||||| |||||||
seq2  GGAATTTGAACCCACATTCCTCCAGAAGAGCA-TCAGTGCTCTTTAACTG  1049

seq1  CTGAGCCATTG-TGGGTT  1059
      |||| |||||| ||||||
seq2  CTGAACCATTGTTGGGTT  1067

seq1: chr7_106410781_106411385
seq2: B6Ng01-322D17.g_65_669 (reverse)

seq1  CTTGGTTTACATAGTGAGTTCCAGGACAGCCAGGGCAGAAAAAAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTTACATAGTGAGTTCCAGGACAGCCAGGGCAGAAAAAAAAAAAA  50

seq1  AGTACCTATATAAAACTTATGAGGGGCTGGTGAGATGGCTCAGTGGGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCTATATAAAACTTATGAGGGGCTGGTGAGATGGCTCAGTGGGTTA  100

seq1  GAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCA  150

seq1  CATGGTGGCTCACAACCATCCGTAATGAGATCTGACTCCTTCTTCTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTGGCTCACAACCATCCGTAATGAGATCTGACTCCTTCTTCTGGAG  200

seq1  TGTCTGAAGACAGCTACAATGTACTTACATATAATAAATAAATAAATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAAGACAGCTACAATGTACTTACATATAATAAATAAATAAATAAA  250

seq1  TAAATAAATAAATCTTAAAAAAAAAACTTATGAGAACATCGGCGGAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATAAATCTTAAAAAAAAAACTTATGAGAACATCGGCGGAGGGA  300

seq1  CAGTCCCTTAAAGAGCCATTTGTTATAGCTGAAGAGATGGTTCACTGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCCTTAAAGAGCCATTTGTTATAGCTGAAGAGATGGTTCACTGGAT  350

seq1  AGCAGCACTTGCTGCTCTTGCAGAGAACCCAGGCTCAGTTCCTCATCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCACTTGCTGCTCTTGCAGAGAACCCAGGCTCAGTTCCTCATCCCT  400

seq1  ATATGATGGTTCGCAACCATTTGTAACTCCAGTTCCAGGGGAACCAACGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATGGTTCGCAACCATTTGTAACTCCAGTTCCAGGGGAACCAACGA  450

seq1  TACGTGTACATACAAGCAGGCAAAACACCCATACTCATAAAATGAAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTGTACATACAAGCAGGCAAAACACCCATACTCATAAAATGAAATAC  500

seq1  ACAACTCTTAACTGTTTTTGTTCACCTGTCTCCACCCCCAGTGTTGGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTCTTAACTGTTTTTGTTCACCTGTCTCCACCCCCAGTGTTGGGGT  550

seq1  AGCAGACACATGCAGCTATGCCTAACTTTTACGTAAGTTCTGGGGGCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGACACATGCAGCTATGCCTAACTTTTACGTAAGTTCTGGGGGCCTG  600

seq1  AATTC  605
      |||||
seq2  AATTC  605