BAC Information

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BAC

Clone NameB6Ng01-322O08
Chromosome7 (Build37)
Map Location 28,580,294 - 28,774,467
singlet/doubletdoublet
Overlap geneLOC100043233, 4933426I21Rik, Zfp59, 4732475C15Rik, Prkcz2, 1700049G17Rik, EG668175, LOC100043771, Zfp780b, C130069I09Rik, LOC100043772
Upstream geneCyp2g1, LOC100043745, Cyp2a5, EG233005, EG330491, Cyp2a12, LOC100043199, Cyp2f2, Gm1450, Egln2, Rab4b, Mia1, Snrpa, Itpkc, Adck4, Numbl, Ltbp4, Shkbp1, Spnb4, Blvrb, EG668045, Sertad3, Sertad1, Prx, Hipk4, Pld3, 2310022A10Rik, Akt2, Ttc9b, Map3k10, C030039L03Rik, Zfp60, LOC100043229
Downstream genePsmc4, LOC100043774, 9530053A07Rik, Fbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4, Lgals7, Capn12, Actn4, Eif3s12, Map4k1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322O08.bB6Ng01-322O08.g
ACCGA111617GA111618
length1,1131,146
definitionB6Ng01-322O08.b B6Ng01-322O08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,580,294 - 28,581,405)(28,773,328 - 28,774,467)
sequence
gaattccttctttatggtcccctgaacatctatctgcttgtgattttgtg
cttcaaaaggagacttgatcctgctttcttagggttgttgctgtcagctc
cgagcctgacctccattgtacataatcagttagaagcattttcccatgat
gaataaaattgcttttggtttaattctgattttggtcgtccttttctcac
tatttgtgtgccctgtgaccccaacattttggtgcatgggtcaggaaagt
gtagagttctcccctgctgtgtgagaggcccaagaagctcacagtttgag
gaagagagacctcaagtctctggcaactttattcttttggtcctgaccga
ttggtaagtttttctctggtttctctttctggtatctggataaactgggc
ctcaatggagaacaggcaggcatgctgttgatctcaaagatgcaagtgtt
gaagggacctcttgacccttcactttggctgttgggttgctcatttgaag
ccctttggaatttgtgcaggtctgccaattcctggcagactaacaaacag
tgctcgtccttctgtgtcagttagttttctgcctggcgcctgccttcact
ttccttttggtgtctcattcactgtcgattttcttgtcattttaaccact
gagctggttctaattaggactcaggtctcctcaacccctcggacccctct
ggaaattgtcctttgttcccattttcagaacttcaaggatgctgcacttg
tcttggtcaataggtgtcaagccagagtggcttaaaaccttttgttcctg
gaatgactagtcttccgagtaggctggccttctgaggcggtcctttgaac
tcagctcattcttcagttaaagatatggtcttcagccatcctggccactt
gaaccaagtcttacttggtggccttgtagctatctcctggttgaccccct
ttcctgcttcttggttaaagcatcttattttccctccaggaacagaccgc
aattcttcccagtcagcaaaggatcagaaaggaaattagccaatctgccg
tccctggtgatgtgaacagcattgtcaagaatcttgaattagaggaactt
ttctcccctccct
gaattcatactgatgagaaaccataccagtgcaaggaatgtgggaaattc
tttcgtcgaaggtcaaattttactgagcatctgagtattcacactaacgt
gaaacctttcaagtgtgagctgtgtgggtcagccttcagacttcagtccc
tacttaatcaacatcagagaattcatactggtgaaaaaccataccagtgc
aaggaatgtgggaaattctttcgtagaagttcaaattttactgaacatcg
gagtattcacactaatgtgaaacctttcaagtgtgagctgtgtgggtcag
ccttcagacttcagtccttacttagtcaacatcagagaattcatactggt
gaaaaaccataccaatgcaaggaatgtgggaaattctttcgtcgaagatc
aaattttactgagcatctgagtattcatactaatgtaaaacctttcaagt
gtgagctgtgtgggtcagacttcagacttcagtccctacttaatcaacat
cagagaattcatactggtgaaaaaccgtatcagtgcaaggaatgtgggaa
attctttcgtagaagttcaaattttactgagcacctgagtattcacactg
gaaagaaacccttcgattgtaataaatgtggaaaagtctttagacttaat
atacatcttattcgccaccagagatttcataatggtgagaaggtaaagag
tgtggagaggcctttcatcttaagagccataaaataatttattcaggtca
gaaatgtttgaatgcaaggaatgtgggaagtccttcaagcttgttttcac
tcttgtttggcatagggttattcatgctgctgtgaaacaatatgaatgta
atgagtgtgggaaaacctttaattgttcaaatctcatgcaacatcagaaa
ttgactctgatgagagactcatttagtgtaaaggactgtgaaaaggcctt
tcactgttcttggctcagcttactaggcaccagaacattcatgctggaaa
gaagttcttttgaatgtgagtagtgcttgggtcaggcttcagacttagtt
gcaacttatttcatctcagagaattcatactgatgtgcatcctatcattt
gcaagggaatggtgtaagctttgttagtggttcaaggtcttagaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_28580294_28581405
seq2: B6Ng01-322O08.b_48_1160

seq1  GAATTCCTTCTTTATGGTCCCCTGAACATCTATCTGCTTGTGATTTTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTTTATGGTCCCCTGAACATCTATCTGCTTGTGATTTTGTG  50

seq1  CTTCAAAAGGAGACTTGATCCTGCTTTCTTAGGGTTGTTGCTGTCAGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAAGGAGACTTGATCCTGCTTTCTTAGGGTTGTTGCTGTCAGCTC  100

seq1  CGAGCCTGACCTCCATTGTACATAATCAGTTAGAAGCATTTTCCCATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCCTGACCTCCATTGTACATAATCAGTTAGAAGCATTTTCCCATGAT  150

seq1  GAATAAAATTGCTTTTGGTTTAATTCTGATTTTGGTCGTCCTTTTCTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAATTGCTTTTGGTTTAATTCTGATTTTGGTCGTCCTTTTCTCAC  200

seq1  TATTTGTGTGCCCTGTGACCCCAACATTTTGGTGCATGGGTCAGGAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTGTGCCCTGTGACCCCAACATTTTGGTGCATGGGTCAGGAAAGT  250

seq1  GTAGAGTTCTCCCCTGCTGTGTGAGAGGCCCAAGAAGCTCACAGTTTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGTTCTCCCCTGCTGTGTGAGAGGCCCAAGAAGCTCACAGTTTGAG  300

seq1  GAAGAGAGACCTCAAGTCTCTGGCAACTTTATTCTTTTGGTCCTGACCGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAGACCTCAAGTCTCTGGCAACTTTATTCTTTTGGTCCTGACCGA  350

seq1  TTGGTAAGTTTTTCTCTGGTTTCTCTTTCTGGTATCTGGATAAACTGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAAGTTTTTCTCTGGTTTCTCTTTCTGGTATCTGGATAAACTGGGC  400

seq1  CTCAATGGAGAACAGGCAGGCATGCTGTTGATCTCAAAGATGCAAGTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGGAGAACAGGCAGGCATGCTGTTGATCTCAAAGATGCAAGTGTT  450

seq1  GAAGGGACCTCTTGACCCTTCACTTTGGCTGTTGGGTTGCTCATTTGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGACCTCTTGACCCTTCACTTTGGCTGTTGGGTTGCTCATTTGAAG  500

seq1  CCCTTTGGAATTTGTGCAGGTCTGCCAATTCCTGGCAGACTAACAAACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGGAATTTGTGCAGGTCTGCCAATTCCTGGCAGACTAACAAACAG  550

seq1  TGCTCGTCCTTCTGTGTCAGTTAGTTTTCTGCCTGGCGCCTGCCTTCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCGTCCTTCTGTGTCAGTTAGTTTTCTGCCTGGCGCCTGCCTTCACT  600

seq1  TTCCTTTTGGTGTCTCATTCACTGTCGATTTTCTTGTCATTTTAACCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTGGTGTCTCATTCACTGTCGATTTTCTTGTCATTTTAACCACT  650

seq1  GAGCTGGTTCTAATTAGGACTCAGGTCTCCTCAACCCCTCGGACCCCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGTTCTAATTAGGACTCAGGTCTCCTCAACCCCTCGGACCCCTCT  700

seq1  GGAAATTGTCCTTTGTTCCCATTTTCAGAACTTCAAGGATGCTGCACTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTGTCCTTTGTTCCCATTTTCAGAACTTCAAGGATGCTGCACTTG  750

seq1  TCTTGGTCAATAGGTGTCAAGCCAGAGTGGCTTAAAACCTTTTGTTCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTCAATAGGTGTCAAGCCAGAGTGGCTTAAAACCTTTTGTTCCTG  800

seq1  GAATGACTAGTCTTCCGAGTAGGCTGGCCTTCTGAGGCGGTCCTTTGAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGACTAGTCTTCCGAGTAGGCTGGCCTTCTGAGGCGGTCCTTTGAAC  850

seq1  TCAGGCTCATTCTTCAGGTTAAAGATATGGTCTTCAGCCATCCTGGCCAC  900
      ||| |||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCA-GCTCATTCTTCA-GTTAAAGATATGGTCTTCAGCCATCCTGGCCAC  898

seq1  TTGAACCAAGTC-TACTTTGTGGCCTTGTAGCTATCTCCTGGTTGACCCC  949
      |||||||||||| ||||| |||||||||||||||||||||||||||||||
seq2  TTGAACCAAGTCTTACTTGGTGGCCTTGTAGCTATCTCCTGGTTGACCCC  948

seq1  C-TTCCTGCTTCTTGGTTAAAGCATCTTATTTTCCCTCCAGGAAACAGGA  998
      | |||||||||||||||||||||||||||||||||||||||| |||| ||
seq2  CTTTCCTGCTTCTTGGTTAAAGCATCTTATTTTCCCTCCAGG-AACA-GA  996

seq1  CCGCAATTCTTCCCAGTCAGCCAAAGGAATCAGGAAGGAAATTTAGCCAA  1048
      |||||||||||||||||||| |||||| ||||| ||||||| ||||||||
seq2  CCGCAATTCTTCCCAGTCAG-CAAAGG-ATCAGAAAGGAAA-TTAGCCAA  1043

seq1  TCTGCCGTCCCT-GTGATGTGACCAGCATTGTCA--GATCCTGAATTAGA  1095
      |||||||||||| ||||||||| |||||||||||   ||| |||||||||
seq2  TCTGCCGTCCCTGGTGATGTGAACAGCATTGTCAAGAATCTTGAATTAGA  1093

seq1  GGACCTTCT---CCCTCCCT  1112
      ||| ||| |   ||||||||
seq2  GGAACTTTTCTCCCCTCCCT  1113

seq1: chr7_28773328_28774467
seq2: B6Ng01-322O08.g_71_1216 (reverse)

seq1  ATTCTAAGA-CTTGGACCACTAACAAAGCTTTTCCACATT-CCTTGC-AA  47
      ||||||||| |||| |||||||||||||| || |  |||| |||||| ||
seq2  ATTCTAAGACCTTGAACCACTAACAAAGC-TTACACCATTCCCTTGCAAA  49

seq1  TGATAGGGATGCACATCAGTATGAATTCTCTGAGATTGAATAAGTTGGCA  97
      ||||| ||||||||||||||||||||||||||||||  |||||||||  |
seq2  TGATA-GGATGCACATCAGTATGAATTCTCTGAGATGAAATAAGTTGCAA  98

seq1  CTAAGTCTGAAGGCTGACC--AGCACTACTCACATTC-AAAGGACTTCTT  144
      |||||||||||| ||||||  |||||||||||||||| |||| |||||||
seq2  CTAAGTCTGAAGCCTGACCCAAGCACTACTCACATTCAAAAGAACTTCTT  148

seq1  TCCAGCATGAATGTTCTGGTGCCTAGTAAGCTGAGCC-AGAACAGTG-AA  192
      ||||||||||||||||||||||||||||||||||||| ||||||||| ||
seq2  TCCAGCATGAATGTTCTGGTGCCTAGTAAGCTGAGCCAAGAACAGTGAAA  198

seq1  GGCCTTTTCACAGTCC-TTACACTAAATGAGTCTCTCATCAGAGTCAATT  241
      |||||||||||||||| ||||||||||||||||||||||||||||||| |
seq2  GGCCTTTTCACAGTCCTTTACACTAAATGAGTCTCTCATCAGAGTCAA-T  247

seq1  TTCTGATGTTGCATGAGATTTGAACAATTAAAGGTTTTCCCACACTCATT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATGTTGCATGAGATTTGAACAATTAAAGGTTTTCCCACACTCATT  297

seq1  ACATTCATATTGTTTCACAGCAGCATGAATAACCCTATGCCAAACAAGAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCATATTGTTTCACAGCAGCATGAATAACCCTATGCCAAACAAGAG  347

seq1  TGAAAACAAGCTTGAAGGACTTCCCACATTCCTTGCATTCAAACATTTCT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACAAGCTTGAAGGACTTCCCACATTCCTTGCATTCAAACATTTCT  397

seq1  GACCTGAATAAATTATTTTATGGCTCTTAAGATGAAAGGCCTCTCCACAC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGAATAAATTATTTTATGGCTCTTAAGATGAAAGGCCTCTCCACAC  447

seq1  TCTTTACCTTCTCACCATTATGAAATCTCTGGTGGCGAATAAGATGTATA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACCTTCTCACCATTATGAAATCTCTGGTGGCGAATAAGATGTATA  497

seq1  TTAAGTCTAAAGACTTTTCCACATTTATTACAATCGAAGGGTTTCTTTCC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTCTAAAGACTTTTCCACATTTATTACAATCGAAGGGTTTCTTTCC  547

seq1  AGTGTGAATACTCAGGTGCTCAGTAAAATTTGAACTTCTACGAAAGAATT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGAATACTCAGGTGCTCAGTAAAATTTGAACTTCTACGAAAGAATT  597

seq1  TCCCACATTCCTTGCACTGATACGGTTTTTCACCAGTATGAATTCTCTGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACATTCCTTGCACTGATACGGTTTTTCACCAGTATGAATTCTCTGA  647

seq1  TGTTGATTAAGTAGGGACTGAAGTCTGAAGTCTGACCCACACAGCTCACA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATTAAGTAGGGACTGAAGTCTGAAGTCTGACCCACACAGCTCACA  697

seq1  CTTGAAAGGTTTTACATTAGTATGAATACTCAGATGCTCAGTAAAATTTG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAGGTTTTACATTAGTATGAATACTCAGATGCTCAGTAAAATTTG  747

seq1  ATCTTCGACGAAAGAATTTCCCACATTCCTTGCATTGGTATGGTTTTTCA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCGACGAAAGAATTTCCCACATTCCTTGCATTGGTATGGTTTTTCA  797

seq1  CCAGTATGAATTCTCTGATGTTGACTAAGTAAGGACTGAAGTCTGAAGGC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATGAATTCTCTGATGTTGACTAAGTAAGGACTGAAGTCTGAAGGC  847

seq1  TGACCCACACAGCTCACACTTGAAAGGTTTCACATTAGTGTGAATACTCC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCACACAGCTCACACTTGAAAGGTTTCACATTAGTGTGAATACTCC  897

seq1  GATGTTCAGTAAAATTTGAACTTCTACGAAAGAATTTCCCACATTCCTTG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTCAGTAAAATTTGAACTTCTACGAAAGAATTTCCCACATTCCTTG  947

seq1  CACTGGTATGGTTTTTCACCAGTATGAATTCTCTGATGTTGATTAAGTAG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGTATGGTTTTTCACCAGTATGAATTCTCTGATGTTGATTAAGTAG  997

seq1  GGACTGAAGTCTGAAGGCTGACCCACACAGCTCACACTTGAAAGGTTTCA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAAGTCTGAAGGCTGACCCACACAGCTCACACTTGAAAGGTTTCA  1047

seq1  CGTTAGTGTGAATACTCAGATGCTCAGTAAAATTTGACCTTCGACGAAAG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTAGTGTGAATACTCAGATGCTCAGTAAAATTTGACCTTCGACGAAAG  1097

seq1  AATTTCCCACATTCCTTGCACTGGTATGGTTTCTCATCAGTATGAATTC  1140
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCCACATTCCTTGCACTGGTATGGTTTCTCATCAGTATGAATTC  1146