BAC Information

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BAC

Clone NameB6Ng01-322O24
Chromosome7 (Build37)
Map Location 101,664,187 - 101,789,705
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC666783, EG638305, EG545982
Downstream geneEG666816, LOC100040132, LOC666823
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322O24.bB6Ng01-322O24.g
ACCGA111649GA111650
length4281,099
definitionB6Ng01-322O24.b B6Ng01-322O24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,664,187 - 101,664,620)(101,788,593 - 101,789,705)
sequence
tgttcctgcctcttcctgtaagtaaaaccactgccttcagttcctcactt
ctgcccccatagctcagagattccagctcttccttaacatttctatttct
ataacctatcagtgtcaaagacctgataggataagtcctaggtggctttg
ttttttttttgttgttgttgttgttgttttgttttgctttgttttttttt
tttgtctttttgcttgttttgttttgtttttgtttggttagttggttggt
ttcttggttggttgttttattagaaaaatatcacatatacatattatatg
catatagttaatatgggtatagctttttatatttagctgataataataaa
ctcaggagcagagacttttatatatgtagggttcataaaattttaaatca
tgagtgtgcatgtgggtggggtgggtgt

gaattccttccttaatcatggatttttctacatcatagtttatacttaaa
catagtggtcaagacaaagtcagtctttatctatttatctattatcatct
attttcctgctcccaaggaaaatgatagaaaaataatatcatgaatgtta
gaattcctgttattcctggattcaaccctctccatatttaatgaaacacc
tctcagtattctgcattttggagaaatttactgagtctgtgataggtgat
atgaacatgtctgggaaaacaatatttcccccaaaacaaagcttaatatt
ttcctagggacatgtattatataaaaatatttgaaaagttttactttgtt
gagtcaatcaacacattttcacaaaatttaaacgagatgtaaaacaaaga
atgacagtcagcaagttttgttgtggtatattttatcctttacatatctt
atatattgtgtttcaaataaataacctgctttcactctcatatctgaaat
cttataaggaacaaggaaaccagcctgctcattctcccgtgctgtttcac
aatagacaatacagttcagtgtgcttgagtttttcaaaaacctacaaatg
aaatattcagagtgtagatcaactgaatttataataaatgaaaagataaa
ttatatatgatggaactcttttctctttgagggtggctttaagtgttaga
cactaacttgatgtgtttcctgaatttgataaaaggaacataacttacac
acttggtgtatgctggcttggggtcagtttaaggaactattctcactttt
attcttactgtgcttcctcagaggaaggatacatccagctgtccttcagt
tgggtgacctgagatgcagtcttaccttattttgggaaagactaatctac
ttgacacagacatttcatctctaaaggactatgaaactgccacccacata
ttagtttagacagtcatcattagtaatataaaaatagttaaggtttatta
atctacatatactactgagagtttcttgaattactatgagacttgtcagt
atttctgttttatggcatgcattgtataatgaacaaacttagtaatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_101664187_101664620
seq2: B6Ng01-322O24.b_43_476

seq1  GAATTCTGTTCCTGCCTCTTCCTGTAAGTAAAACCACTGCCTTCAGTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCCTGCCTCTTCCTGTAAGTAAAACCACTGCCTTCAGTTCC  50

seq1  TCACTTCTGCCCCCATAGCTCAGAGATTCCAGCTCTTCCTTAACATTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCTGCCCCCATAGCTCAGAGATTCCAGCTCTTCCTTAACATTTCT  100

seq1  ATTTCTATAACCTATCAGTGTCAAAGACCTGATAGGATAAGTCCTAGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTATAACCTATCAGTGTCAAAGACCTGATAGGATAAGTCCTAGGTG  150

seq1  GCTTTGTTTTTTTTTTGTTGTTGTTGTTGTTGTTTTGTTTTGCTTTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTTTTTTTTTTGTTGTTGTTGTTGTTGTTTTGTTTTGCTTTGTTT  200

seq1  TTTTTTTTTGTCTTTTTGCTTGTTTTGTTTTGTTTTTGTTTGGTTAGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTGTCTTTTTGCTTGTTTTGTTTTGTTTTTGTTTGGTTAGTTG  250

seq1  GTTGGTTTCTTGGTTGGTTGTTTTATTAGAAAAATATCACATATACATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTTTCTTGGTTGGTTGTTTTATTAGAAAAATATCACATATACATAT  300

seq1  TATATGCATATAGTTAATATGGGTATAGCTTTTTATATTTAGCTGATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGCATATAGTTAATATGGGTATAGCTTTTTATATTTAGCTGATAAT  350

seq1  AATAAACTCAGGAGCAGAGACTATTATATATGTAGGGTTCATAAAATTTT  400
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AATAAACTCAGGAGCAGAGACTTTTATATATGTAGGGTTCATAAAATTTT  400

seq1  AAATCATGAGTGTGCATGTGGGTGGGGTGGGTGT  434
      ||||||||||||||||||||||||||||||||||
seq2  AAATCATGAGTGTGCATGTGGGTGGGGTGGGTGT  434


seq1: chr7_101788593_101789705
seq2: B6Ng01-322O24.g_63_1161 (reverse)

seq1  AATATTACTAAGTTTTGTCATTTATACAATGCATACCCAATAAAACAGAA  50
      |||||||||||||||  ||| ||||||||||||| ||  |||||||||||
seq2  AATATTACTAAGTTTGTTCA-TTATACAATGCATGCC--ATAAAACAGAA  47

seq1  ATTACTGACAAGTTCTCATTAGGTAAATTTCAGAAACTCTCAAGTAGTAA  100
      | |||||||||| ||||| |||   ||||  |||||||||| |||||| |
seq2  A-TACTGACAAG-TCTCA-TAG--TAATTCAAGAAACTCTC-AGTAGT-A  90

seq1  TATGTAAGATTAATAAACCTTAACTA-TTTTATATTAACTAATTGATGGA  149
      ||||| |||||||||||||||||||| ||||||||| ||||| |||| ||
seq2  TATGT-AGATTAATAAACCTTAACTATTTTTATATT-ACTAA-TGAT-GA  136

seq1  CTGTTCTAAACTAATATGTGGGTGGCAGTTTCATAGTCCTTTAGAGATGA  199
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTG-TCTAAACTAATATGTGGGTGGCAGTTTCATAGTCCTTTAGAGATGA  185

seq1  AATGTCTGTGTCAAGTAGATTAGTCTTTCCCAAAATAAGGTAAGACTGCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTGTGTCAAGTAGATTAGTCTTTCCCAAAATAAGGTAAGACTGCA  235

seq1  TCTCAGGTCACCCAACTGAAGGACAGCTGGATGTATCCTTCCTCTGAGGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGTCACCCAACTGAAGGACAGCTGGATGTATCCTTCCTCTGAGGA  285

seq1  AGCACAGTAAGAATAAAAGTGAGAATAGTTCCTTAAACTGACCCCAAGCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGTAAGAATAAAAGTGAGAATAGTTCCTTAAACTGACCCCAAGCC  335

seq1  AGCATACACCAAGTGTGTAAGTTATGTTCCTTTTATCAAATTCAGGAAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATACACCAAGTGTGTAAGTTATGTTCCTTTTATCAAATTCAGGAAAC  385

seq1  ACATCAAGTTAGTGTCTAACACTTAAAGCCACCCTCAAAGAGAAAAGAGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAGTTAGTGTCTAACACTTAAAGCCACCCTCAAAGAGAAAAGAGT  435

seq1  TCCATCATATATAATTTATCTTTTCATTTATTATAAATTCAGTTGATCTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCATATATAATTTATCTTTTCATTTATTATAAATTCAGTTGATCTA  485

seq1  CACTCTGAATATTTCATTTGTAGGTTTTTGAAAAACTCAAGCACACTGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGAATATTTCATTTGTAGGTTTTTGAAAAACTCAAGCACACTGAA  535

seq1  CTGTATTGTCTATTGTGAAACAGCACGGGAGAATGAGCAGGCTGGTTTCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTGTCTATTGTGAAACAGCACGGGAGAATGAGCAGGCTGGTTTCC  585

seq1  TTGTTCCTTATAAGATTTCAGATATGAGAGTGAAAGCAGGTTATTTATTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCTTATAAGATTTCAGATATGAGAGTGAAAGCAGGTTATTTATTT  635

seq1  GAAACACAATATATAAGATATGTAAAGGATAAAATATACCACAACAAAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACAATATATAAGATATGTAAAGGATAAAATATACCACAACAAAAC  685

seq1  TTGCTGACTGTCATTCTTTGTTTTACATCTCGTTTAAATTTTGTGAAAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGACTGTCATTCTTTGTTTTACATCTCGTTTAAATTTTGTGAAAAT  735

seq1  GTGTTGATTGACTCAACAAAGTAAAACTTTTCAAATATTTTTATATAATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGATTGACTCAACAAAGTAAAACTTTTCAAATATTTTTATATAATA  785

seq1  CATGTCCCTAGGAAAATATTAAGCTTTGTTTTGGGGGAAATATTGTTTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCCCTAGGAAAATATTAAGCTTTGTTTTGGGGGAAATATTGTTTTC  835

seq1  CCAGACATGTTCATATCACCTATCACAGACTCAGTAAATTTCTCCAAAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACATGTTCATATCACCTATCACAGACTCAGTAAATTTCTCCAAAAT  885

seq1  GCAGAATACTGAGAGGTGTTTCATTAAATATGGAGAGGGTTGAATCCAGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATACTGAGAGGTGTTTCATTAAATATGGAGAGGGTTGAATCCAGG  935

seq1  AATAACAGGAATTCTAACATTCATGATATTATTTTTCTATCATTTTCCTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAGGAATTCTAACATTCATGATATTATTTTTCTATCATTTTCCTT  985

seq1  GGGAGCAGGAAAATAGATGATAATAGATAAATAGATAAAGACTGACTTTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCAGGAAAATAGATGATAATAGATAAATAGATAAAGACTGACTTTG  1035

seq1  TCTTGACCACTATGTTTAAGTATAAACTATGATGTAGAAAAATCCATGAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGACCACTATGTTTAAGTATAAACTATGATGTAGAAAAATCCATGAT  1085

seq1  TAAGGAAGGAATTC  1113
      ||||||||||||||
seq2  TAAGGAAGGAATTC  1099


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