BAC Information

Click to search

BAC

Clone NameB6Ng01-323G23
Chromosome7 (Build37)
Map Location 107,048,098 - 107,049,101
singlet/doubletsinglet
Overlap geneXrra1
Upstream geneUvrag, EG666529, Dgat2, Mogat2, Mtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2
Downstream geneEG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323G23.g
ACCGA112011
length1,062
definitionB6Ng01-323G23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaaagagcctgaaagtgaccggaggcaagaaatgaacttgggac
tgctatggatatgagttcaacatgtcagtgtaccagcaacaaatgaacgg
gactggagtatcaaaatcggcaccactgatgactgctcgcataaagagat
caaagcctggggacacatctgatgacatgtgcatgctctcagccttggaa
gcaacagagcctcctgcgaggagctaaaggacttgaccatcaggctggag
aggtggctcagtggctaagaggaccagctactcttccaaaggacctgatt
tcaatttccagcacacacttggcagctcacaatcttctttaactccactc
ccaggagagcctatcccctcttctggcctcttcaagcatggcatacactt
ggtgcacagacatacatatggacagaacacacacataaaatgttaaaaga
cctgaaaactgatagggtgtgttctttgactattctggaaaacatatcat
aaggacattatttccaccttgacctagatattcagtacacttccaatcaa
atgcaggcctttagtggtgcagaagttgtcgggcactgcagctctctctc
ctgaagaggctcactagcaagcagcaaggctaggataagtggctaggcct
agttactgtggcactcactcctgctgtcacttcagcttgggagcacagca
gggtatgggctagtatgctaaaaaaatacatttgcatgaaaacagcctta
tgtaatggtataattaaaaaaaggaaaagagaatttctataaaagtcttt
atagaggaccattgaagtgggcaggccaatggcagaccaagctcacatct
agccagatacccctgctacagaaacaagtcaggggaaaaacaaactacac
agattttttttgtaacatttataaagggatttgtgtccaggattattaaa
aaaccaataaatcagaaaaaagtacacattccatatgagtattttcccaa
aggaacatcaaactgactaacacacaatacagaaacttgacatcactggc
cacttggagagt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_107048098_107049101
seq2: B6Ng01-323G23.g_120_1127 (reverse)

seq1  ACTCT-CAAGTGGCCAGTGATGTCAAG-TTCTGTA-TGTGTGTTGGTCAG  47
      ||||| ||||||||||||||||||||| ||||||| |||||||| |||||
seq2  ACTCTCCAAGTGGCCAGTGATGTCAAGTTTCTGTATTGTGTGTTAGTCAG  50

seq1  TTTGATGTTCCTTTGGG-AAATACTCATATTGGAATGTGTACTTTTTTCT  96
      ||||||||||||||||| ||||||||||| ||||||||||||||||||| 
seq2  TTTGATGTTCCTTTGGGAAAATACTCATA-TGGAATGTGTACTTTTTTC-  98

seq1  TGATTTATTGGTTTTTTAATAATCCTGGACACAAAT-CCTTTATAAATGT  145
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGATTTATTGGTTTTTTAATAATCCTGGACACAAATCCCTTTATAAATGT  148

seq1  TAC-AAAAAAATCTGTGTAGTTTGTTTTTCCCCTGACTTGTTTCTGTAGC  194
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAAAAATCTGTGTAGTTTGTTTTTCCCCTGACTTGTTTCTGTAGC  198

seq1  AGGGGTATCTGGCTAGATGTGAGCTTGGTCTGCCATTGGCCTGCCCACTT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTATCTGGCTAGATGTGAGCTTGGTCTGCCATTGGCCTGCCCACTT  248

seq1  CAATGGTCCTCTATAAAGACTTTTATAGAAATTCTCTTTTCCTTTTTTTA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGTCCTCTATAAAGACTTTTATAGAAATTCTCTTTTCCTTTTTTTA  298

seq1  ATTATACCATTACATAAGGCTGTTTTCATGCAAATGTATTTTTTTAGCAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACCATTACATAAGGCTGTTTTCATGCAAATGTATTTTTTTAGCAT  348

seq1  ACTAGCCCATACCCTGCTGTGCTCCCAAGCTGAAGTGACAGCAGGAGTGA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCCCATACCCTGCTGTGCTCCCAAGCTGAAGTGACAGCAGGAGTGA  398

seq1  GTGCCACAGTAACTAGGCCTAGCCACTTATCCTAGCCTTGCTGCTTGCTA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCACAGTAACTAGGCCTAGCCACTTATCCTAGCCTTGCTGCTTGCTA  448

seq1  GTGAGCCTCTTCAGGAGAGAGAGCTGCAGTGCCCGACAACTTCTGCACCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCTCTTCAGGAGAGAGAGCTGCAGTGCCCGACAACTTCTGCACCA  498

seq1  CTAAAGGCCTGCATTTGATTGGAAGTGTACTGAATATCTAGGTCAAGGTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGGCCTGCATTTGATTGGAAGTGTACTGAATATCTAGGTCAAGGTG  548

seq1  GAAATAATGTCCTTATGATATGTTTTCCAGAATAGTCAAAGAACACACCC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAATGTCCTTATGATATGTTTTCCAGAATAGTCAAAGAACACACCC  598

seq1  TATCAGTTTTCAGGTCTTTTAACATTTTATGTGTGTGTTCTGTCCATATG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTTTTCAGGTCTTTTAACATTTTATGTGTGTGTTCTGTCCATATG  648

seq1  TATGTCTGTGCACCAAGTGTATGCCATGCTTGAAGAGGCCAGAAGAGGGG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTGTGCACCAAGTGTATGCCATGCTTGAAGAGGCCAGAAGAGGGG  698

seq1  ATAGGCTCTCCTGGGAGTGGAGTTAAAGAAGATTGTGAGCTGCCAAGTGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCTCTCCTGGGAGTGGAGTTAAAGAAGATTGTGAGCTGCCAAGTGT  748

seq1  GTGCTGGAAATTGAAATCAGGTCCTTTGGAAGAGTAGCTGGTCCTCTTAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGAAATTGAAATCAGGTCCTTTGGAAGAGTAGCTGGTCCTCTTAG  798

seq1  CCACTGAGCCACCTCTCCAGCCTGATGGTCAAGTCCTTTAGCTCCTCGCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAGCCACCTCTCCAGCCTGATGGTCAAGTCCTTTAGCTCCTCGCA  848

seq1  GGAGGCTCTGTTGCTTCCAAGGCTGAGAGCATGCACATGTCATCAGATGT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTCTGTTGCTTCCAAGGCTGAGAGCATGCACATGTCATCAGATGT  898

seq1  GTCCCCAGGCTTTGATCTCTTTATGCGAGCAGTCATCAGTGGTGCCGATT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAGGCTTTGATCTCTTTATGCGAGCAGTCATCAGTGGTGCCGATT  948

seq1  TTGATACTCCAGTCCCGTTCATTTGTTGCTGGTACACTGACATGTTGAAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACTCCAGTCCCGTTCATTTGTTGCTGGTACACTGACATGTTGAAC  998

seq1  TCATATCCAT  1004
      ||||||||||
seq2  TCATATCCAT  1008