BAC Information

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BAC

Clone NameB6Ng01-323J21
Chromosome7 (Build37)2 (Build37)
Map Location 34,535,957 - 34,536,399116,344,350 - 116,344,639
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1, LOC668440, Abpz, LOC100043860
Downstream geneLOC627079, LOC635803, Abpg, LOC100043864, LOC100043865, Abpb, Abpa, LOC100043866, LOC100043867, LOC100043868, Wtip, Sae2, LOC100043410, Pdcd2l, Gpi1, 4931406P16Rik, EG619734, Lsm14a, LOC668460, LOC668464, Kctd15, Chst8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323J21.bB6Ng01-323J21.g
ACCGA112149GA112150
length437951
definitionB6Ng01-323J21.b B6Ng01-323J21.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(34,535,957 - 34,536,399)(116,344,350 - 116,344,639)
sequence
tttgtttagctctgagccccattttttaatggggttatttgattttctgg
aatccaccttcttgagttctttgtatatattggacattagtcccctatct
gatttaggataggtaaagatcctttcccaatctgttggtggcctatttgt
cttattgactgtgtcttttgccttacagaatctttgcaaatttatgaggt
cccatttgtcgattctcagtcttacagcacaagccattgctgttctattc
aggaatttttcccctgtgcccatatcttcgaggctttttcccactttttc
ttctataagtttcactgtctctggttttatgtggagttctttgatccact
tgtactaaggtcaaatctaaatggatcctttgtttttgggtagataaagc
cagaagtggtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattcagccctagcttcagctggtccatggcattttatagactgaatac
atgggcatgcatatgcaatagacttctatataaccatgaaaaataaaatt
ttctcatttgcaggaagtgagtgaaagtagagatcacactgaatctggta
agctgttttatctttctagcctgttactcatttttaaagtatgcttttgc
atttttgtctttattttttttattattattttcttttgtgtgtataggtg
tttttgctgcaggtatgtatgtgcatcatttaatgcttgttgactgtgga
ggtcagaagagagacatcagatcccttggaactggaggtacagttggatt
agtatatgttgctctgctaattaaggtcaaagtctatcaattttcagata
accttctggggctcagtgcaatatggaggacttccttcattgacatttct
tttctttctttttttttcattaggtattttcctcaattacattttcaatg
ctatcccaaaagtcccccaaaccctccccccctactcccctactttttgg
ccctggcattcccctgtactggagcatataaagtttacatgtccaatggg
cctctctttccagtgatggccggctaggccatcttttgatacatatgcag
ctagagtcaacagctccggggtactggttagttcataatgttgttgcacc
tatagggttgcaaatctctttagctccttggatactttctctagctcctc
cattgggggccctgtgattcatccaatagctgattgtgagcacccacttc
tgtgtttgctaggccccagcctagtctcacaagagacagctatatcaggg
tcctttcagcaaactcttgctagtgtatgcaatggtgtcatcatttggag
gctgattacggatggatccctggatatggcagtctctagatggcatttct
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_34535957_34536399
seq2: B6Ng01-323J21.b_44_486

seq1  GAATTCTTTGTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGGAATCCACCTTCTTGAGTTCTTTGTATATATTGGACATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAATCCACCTTCTTGAGTTCTTTGTATATATTGGACATTAGTCCC  100

seq1  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT  150

seq1  ATTTGTCTTATTGACTGTGTCTTTTGCCTTACAGAATCTTTGCAAATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCTTATTGACTGTGTCTTTTGCCTTACAGAATCTTTGCAAATTTA  200

seq1  TGAGGTCCCATTTGTCGATTCTCAGTCTTACAGCACAAGCCATTGCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCCCATTTGTCGATTCTCAGTCTTACAGCACAAGCCATTGCTGTT  250

seq1  CTATTCAGGAATTTTTCCCCTGTGCCCATATCTTCGAGGCTTTTTCCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAGGAATTTTTCCCCTGTGCCCATATCTTCGAGGCTTTTTCCCAC  300

seq1  TTTTTCTTCTATAAGTTTCACTGTCTCTGGTTTTATGTGGAGTTCTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTCTATAAGTTTCACTGTCTCTGGTTTTATGTGGAGTTCTTTGA  350

seq1  TCCACTTGTACTAAGGTCAAATCTAAATGGATCCTTTGTTTTTGGGTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTGTACTAAGGTCAAATCTAAATGGATCCTTTGTTTTTGGGTAGA  400

seq1  TAAAGCCAGAAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  443
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCAGAAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  443

seq1: chr2_116344350_116344639
seq2: B6Ng01-323J21.g_520_787

seq1  TCTTTTTTTCCCATTTTTTATTAGGTATTTAGCTCCTTTACATTTCCAAT  50
      ||||||       ||||| |||||||||||  |||  |||||||| ||||
seq2  TCTTTT-------TTTTTCATTAGGTATTTTCCTCAATTACATTTTCAAT  43

seq1  GCTATAACAAAAGTCCCCCATACCCACCCACCCCCACTCCCCTAACCACC  100
      |||||  ||||||||||||| |||| ||| |||| |||||||||      
seq2  GCTATCCCAAAAGTCCCCCAAACCCTCCC-CCCCTACTCCCCTA------  86

seq1  CACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGT  150
              ||||||||||||||| |||||||||||||| |||||||||||
seq2  --------CTTTTTGGCCCTGGCATTCCCCTGTACTGGAGCATATAAAGT  128

seq1  TTGCGTGTCCAATGGGCCTCTCTTTTCAGTGATGGCCGACTAGGCCATCT  200
      || | |||||||||||||||||||| |||||||||||| |||||||||||
seq2  TTACATGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGGCTAGGCCATCT  178

seq1  TTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTC  250
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTGATACATATGCAGCTAGAGTCAACAGCTCCGGGGTACTGGTTAGTTC  228

seq1  ATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGC  290
      ||||||||||| |||||||||||||||| ||| |||||||
seq2  ATAATGTTGTTGCACCTATAGGGTTGCAAATCTCTTTAGC  268