BAC Information

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BAC

Clone NameB6Ng01-323M21
Chromosome7 (Build37)
Map Location 7,746,033 - 7,747,086
singlet/doubletsinglet
Overlap geneEG625353
Upstream geneUsp29, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485
Downstream geneVmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323M21.bB6Ng01-323M21.g
ACCGA112288GA112289
length1,2491,047
definitionB6Ng01-323M21.b B6Ng01-323M21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttacaaccccatgggacaaggaatagttgaacgtgctcatcgc
accttaaagaattggctttttaaaacaaaagaggggcagctatatccccc
aaggtcaccaaaggcccaccttgccttcaccttatttgtcctaaatttct
tgcacaccgatatcaagggccagtctgcagcggatcgccactggcatcca
gttacttctaattcttatgcattggtaaaatggaaggaccccctgactaa
tgaatggaagggtccagatccagttctaatttggggtaggggctcagttt
gtgttttttcacgagatgaaaatggagcgcggtggctgccagagagatta
attcgtcagatgaacacagattctgactcttctggtatcattctaaagac
taaaattccttttgtgcttagaattcagctgagagcgaaagctcccaaag
ctgttttccagctactctctgagccagctcccaacaggaggccggagact
agcctcagctttacaatttgcatttgaataaagtacctagacttcccgaa
agaagttctgctttcctactttctcactgtcgagattttgtctttcaagc
aggtaaatcaacattctcgaagtggaccagcggatgtgcatccccgcccc
cctagagcacacaggtagctgctgttatctcctttccaaggacatttcca
gcacgtggctttcagtctgagttaaaaattaggtttaccaagagggctag
aagagtagatatttctatattaataaagattggtttttattttgatagac
aggcttagtcccttagctgacctctggcttttcacccttgctgttactgc
aaggtgtccttaggctgtggaaaaaacagggatgaggaggaacgacttcc
agctcctattttagccacaagtcgtggtgttactaatgacataattcttg
cctaggtcttgctaaatctgagttgataattctcctttaggagctgcaca
gcactcagactgtgcatactgggtttggtgattgtacaaattcagttatg
ggcatcgcttggtgcagaggccactgccaggggaggtccagcttgaccat
ttcttgagttttcatggtgagattaaacctggattcaaagaggttgcatt
ctattttcggttaaagtcgaaatttatcgtctggctcatgttcccaaatg
catcccagaagtctcaaggagagtcgtgagagtcttgttatgtgcgatc
gaattcccattgacatttaacttgattttgtccaaggaattacttttgaa
gtttgacattaatagtttataggagcatcttattatgtttatcacatgta
aatatggaataaataactggcatcgataattccatatgtcctgattatag
aatttacaatttaaagtatagtttcaaaaataaagtgttcttagtactaa
acctggaataaatatcactcaattgtctatcactaactcatgctttactc
actactattcatatgaggtatgaggttggatttcctggtcttttcaccta
gcatcgtttcatacgactacttaccataatgtgatatgcaaattttgtcc
tattatgatggcttagattttgtttattcttgttttattttagtattctc
ctatagaatccttttattttctaatgagtgacagaaagtggatctgatgg
aaaagggagttgggatgtaaataggaatattaactaagatatatttgcca
gcaaagctgagagttccattccaatagaagggagtgaaactgtaattagg
atatattatgtgaggataacaatttattttcaaaaaataaaacaatcaca
atttcaaaaaattctctctgttctcagagaatgatctttctgttgtgtgt
tgtgttcttttgttacgtgtttttgtcaagtattattccatacatatgta
tcaaattcttgaattaccttttccccccttattaaacattataatgtttt
cctccatttttttaagaaagaaaagttctcctcttgtatatgaatgtgtc
ttcctaccctctgcaggcaacttaggaatgtcttaaaaaataaatcagcc
tcggttgtgttgggagccgcccccacattcgccgtcacaagatggcgctg
ccatcctgtgttctaagtggtaaacaaataatctgcgcatgtgccaagag
tactttccactactgtactctgcctttcccgtgacgtcgactcgccatgg
gctgcagcatcacgatgatgcttccaagcgaaggataactctcctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7746033_7747086
seq2: B6Ng01-323M21.g_68_1114

seq1  GAATTCCCATTGACATTTAACTTGATTTTGTCCAAGGAATTACTTTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTGACATTTAACTTGATTTTGTCCAAGGAATTACTTTTGAA  50

seq1  GTTTGACATTAATAGTTTATAGGAGCATCTTATTATGTTTATCACATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGACATTAATAGTTTATAGGAGCATCTTATTATGTTTATCACATGTA  100

seq1  AATATGGAATAAATAACTGGCATCGATAATTCCATATGTCCTGATTATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGGAATAAATAACTGGCATCGATAATTCCATATGTCCTGATTATAG  150

seq1  AATTTACAATTTAAAGTATAGTTTCAAAAATAAAGTGTTCTTAGTACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACAATTTAAAGTATAGTTTCAAAAATAAAGTGTTCTTAGTACTAA  200

seq1  ACCTGGAATAAATATCACTCAATTGTCTATCACTAACTCATGCTTTACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGAATAAATATCACTCAATTGTCTATCACTAACTCATGCTTTACTC  250

seq1  ACTACTATTCATATGAGGTATGAGGTTGGATTTCCTGGTCTTTTCACCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTATTCATATGAGGTATGAGGTTGGATTTCCTGGTCTTTTCACCTA  300

seq1  GCATCGTTTCATACGACTACTTACCATAATGTGATATGCAAATTTTGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCGTTTCATACGACTACTTACCATAATGTGATATGCAAATTTTGTCC  350

seq1  TATTATGATGGCTTAGATTTTGTTTATTCTTGTTTTATTTTAGTATTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGATGGCTTAGATTTTGTTTATTCTTGTTTTATTTTAGTATTCTC  400

seq1  CTATAGAATCCTTTTATTTTCTAATGAGTGACAGAAAGTGGATCTGATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGAATCCTTTTATTTTCTAATGAGTGACAGAAAGTGGATCTGATGG  450

seq1  AAAAGGGAGTTGGGATGTAAATAGGAATATTAACTAAGATATATTTGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGAGTTGGGATGTAAATAGGAATATTAACTAAGATATATTTGCCA  500

seq1  GCAAAGCTGAGAGTTCCATTCCAATAGAAGGGAGTGAAACTGTAATTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCTGAGAGTTCCATTCCAATAGAAGGGAGTGAAACTGTAATTAGG  550

seq1  ATATATTATGTGAGGATAACAATTTATTTTCAAAAAATAAAACAATCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTATGTGAGGATAACAATTTATTTTCAAAAAATAAAACAATCACA  600

seq1  ATTTCAAAAAATTCTCTCTGTTCTCAGAGAATGATCTTTCTGTTGTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAAAAATTCTCTCTGTTCTCAGAGAATGATCTTTCTGTTGTGTGT  650

seq1  TGTGTTCTTTTGTTACGTGTTTTTGTCAAGTATTATTCCATACATATGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCTTTTGTTACGTGTTTTTGTCAAGTATTATTCCATACATATGTA  700

seq1  TCAAATTCTTGAATTACCTTTTCCCCCCTTATTAAACATTATAATGTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTCTTGAATTACCTTTTCCCCCCTTATTAAACATTATAATGTTTT  750

seq1  CCTCCATTTTTTTAAGAAAGAAAAGTTCTCCTCTTGTATATGAATGTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATTTTTTTAAGAAAGAAAAGTTCTCCTCTTGTATATGAATGTGTC  800

seq1  TTCCTACCCTCTGCAGGCAACTTAGGAATGTCTTAAAAAATAAATCAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTACCCTCTGCAGGCAACTTAGGAATGTCTTAAAAAATAAATCAGCC  850

seq1  TC-GTTGTGTTGGGAGCCGCCCCCACATTCGCCGTCACAAGATGGCGCTG  899
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTTGTGTTGGGAGCCGCCCCCACATTCGCCGTCACAAGATGGCGCTG  900

seq1  CCATCCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCAAGAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCAAGAG  950

seq1  TAATTTTCCACTACATGTACTCTGCCTTTCCCGTGACGTCAACTCGGCCA  999
      | | |||||||||| ||||||||||||||||||||||||| |||| ||||
seq2  T-ACTTTCCACTAC-TGTACTCTGCCTTTCCCGTGACGTCGACTC-GCCA  997

seq1  TGGGCTGCAGCCAATCAGGGAGTGATGCGTCCTAGGCGAAGGATAACTCT  1049
      |||||||||||  |||| |   |||||| ||| | |||||||||||||||
seq2  TGGGCTGCAGC--ATCACG--ATGATGCTTCC-AAGCGAAGGATAACTCT  1042

seq1  CCTAA  1054
      |||||
seq2  CCTAA  1047