BAC Information

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BAC

Clone NameB6Ng01-323O17
Chromosome7 (Build37)
Map Location 77,478,236 - 77,634,339
singlet/doubletdoublet
Overlap geneNr2f2, LOC100042833, B130024G19Rik, LOC100042838
Upstream geneEG665410
Downstream geneLOC665486, LOC100041957
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323O17.bB6Ng01-323O17.g
ACCGA112369GA112370
length1,133982
definitionB6Ng01-323O17.b B6Ng01-323O17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,633,212 - 77,634,339)(77,478,236 - 77,479,215)
sequence
gaattcatttatgtttcagatatactttatccacacaaattcaagacaat
tttacataatacttttagtgcaaatgaattttgcctctaccccattacat
gaggtcagacaagaaagttctgttggtagtgccatgatgatgctccaaag
ggttttttgcaaaatgcctgcaacattttggatatttaattatccagtta
aagatatacttaaacggcaatggtccacacaggtactcattcatctagga
ctggggaattctaagatgtagtgtttttctatctaaacccagcacagtct
gggaaacacagtggattttcagtcattatcttgctccccctacctcaaag
gctttactatctgataacattcagtttgctctgtgtgtgtttatttatca
gttcctttggtctagaataaaatccctatgagggtccagagaaatcttgg
cattatatgattgtagggctaaggtgtaagtactaagtaactattgaaaa
tcaagtgaatttttgtattagttgattgagtcctttgtatttgtttacat
gtgtatacaaatgtgatatatacgtggggggtgcatgcgtgggtgcatgt
gtgtggaagcctgtagttgaaatagaattgctaaattgattgctctccac
cttatttattgagtcaggttctctcactgaacccagagctcactgattcc
agttggtgtagctagccagcctgttttgagtaatcccctgcctcggtctc
ccagaggctgagattacagatgactgcgacaccttccccacttttgtgta
ggtggtgaggattcaccattgagacatttccccaggtctgatgcctttaa
aaaaaaagtctagttttccagtttttaatttaacaacataataagaaatg
taaagttctgtgggacaccacgattgatgaaggagcattctgtgaaggaa
aaatgccaagtgaattttaaacgattggcctatgaaggttgtaaagaatt
caaataactgcattccttctccatctggatccccaactcttgaatgaaga
aaatatgaacatttcgagccatttacctctgaatgtagcctgtagcgagt
attacactcaatgggttaaatacaagattagtg
gaattcctaaggcctgtcatctgcctggcctggacacactaccttaagcc
aaatctatcactagtatgggaattcaagtggaaaccagcaggctcaccag
catgtccccctttggctctttgtgggccttgatcctcccctcgttccttg
ccattccccagaccaaagcttcaccgctgcttcacgttgctgacaggcca
actgcagcccagtgaatgcagcccgttaggtggccaaataacaccccccc
cccgtttgtctttctcaacgctgatttatagcaatcgacagggtaaaggc
tcctctgacatcattatttttaaaagatgtctatttctcatccgtcacct
ttcatcacttagcacaaataaatacttaaatgaattggaagagactttca
gatcatgtttataattcttggttgtccgttaacattcctaatgacctggt
cctctgagtttctctagagtcctaagttgggttcaaaatcctgctgtttc
tgctttaaaacttcgacgaaagtgggtgaagtgggggctaaaagagacac
acagttaagctgcaagtttgcaacactgtgaggaggaaaaaagtttcctg
gcagcctgaaggtacaggccactggggaaggagaacatcgcatggttcag
gggacccactagacccggaagctgaaaagaggccctcagagcatgggcac
aaattttgcacgactgttggtcctcggagccacactgcaaaaccacagtg
acatctccattatacaggagtgctgcgcagagggactaccgccactatta
cttctatcatcatttccaaagaggtctaaagggcatttcctctcctgcgt
ctttattagcctttatgagcctgagacttcgggaaatgtagaagcgaggt
gaaaacgaaatcgcatggattgaaatccatgcaataaatcaaatttgttt
ccttcaactttttgctgccatttatttggtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_77633212_77634339
seq2: B6Ng01-323O17.b_42_1174 (reverse)

seq1  CACTAATCTTGTATTTAACACATTGAGTG--ATACTCGCTACAGCCAACA  48
      ||||||||||||||||||| |||||||||  ||||||||||||| | |||
seq2  CACTAATCTTGTATTTAACCCATTGAGTGTAATACTCGCTACAGGCTACA  50

seq1  TTCCAGA-GTAAATGG-TAGAAATGTCTATATTTCTTTCATTACAGAGTT  96
      || |||| |||||||| | |||||||  ||||||  ||||||  ||||||
seq2  TT-CAGAGGTAAATGGCTCGAAATGTTCATATTTTCTTCATTCAAGAGTT  99

seq1  GGGGAT-CAGAT-GAGAAGGAATGCAGTTATTTGAATTCTTTACAACC-T  143
      |||||| ||||| ||||||||||||||||||||||||||||||||||| |
seq2  GGGGATCCAGATGGAGAAGGAATGCAGTTATTTGAATTCTTTACAACCTT  149

seq1  CATAGGCCCAATCGTTTAAAATTCACTTGGCATTTTTCCTTCACAGAATG  193
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGG-CCAATCGTTTAAAATTCACTTGGCATTTTTCCTTCACAGAATG  198

seq1  CTCCTTCATCAATCGTGGTGTCCCACAGAACTTTACATTTCTTATTATGT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCATCAATCGTGGTGTCCCACAGAACTTTACATTTCTTATTATGT  248

seq1  TGTTAAATTTAAAAACTGGAAAACTAGACTTTTTTTTT-AAGGCATCAGA  292
      ||||||| |||||||||||||||||||||||||||||| |||||||||||
seq2  TGTTAAA-TTAAAAACTGGAAAACTAGACTTTTTTTTTAAAGGCATCAGA  297

seq1  CCTGGGGAAATGTCTCAATGGTGAATCCTCACCACCTACACAAAAGTGGG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGGAAATGTCTCAATGGTGAATCCTCACCACCTACACAAAAGTGGG  347

seq1  GAAGGTGTCGCAGTCATCTGTAATCTCAGCCTCTGGGAGACCGAGGCAGG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGTCGCAGTCATCTGTAATCTCAGCCTCTGGGAGACCGAGGCAGG  397

seq1  GGATTACTCAAAACAGGCTGGCTAGCTACACCAACTGGAATCAGTGAGCT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTACTCAAAACAGGCTGGCTAGCTACACCAACTGGAATCAGTGAGCT  447

seq1  CTGGGTTCAGTGAGAGAACCTGACTCAATAAATAAGGTGGAGAGCAATCA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTCAGTGAGAGAACCTGACTCAATAAATAAGGTGGAGAGCAATCA  497

seq1  ATTTAGCAATTCTATTTCAACTACAGGCTTCCACACACATGCACCCACGC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCAATTCTATTTCAACTACAGGCTTCCACACACATGCACCCACGC  547

seq1  ATGCACCCCCCACGTATATATCACATTTGTATACACATGTAAACAAATAC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACCCCCCACGTATATATCACATTTGTATACACATGTAAACAAATAC  597

seq1  AAAGGACTCAATCAACTAATACAAAAATTCACTTGATTTTCAATAGTTAC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACTCAATCAACTAATACAAAAATTCACTTGATTTTCAATAGTTAC  647

seq1  TTAGTACTTACACCTTAGCCCTACAATCATATAATGCCAAGATTTCTCTG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTACTTACACCTTAGCCCTACAATCATATAATGCCAAGATTTCTCTG  697

seq1  GACCCTCATAGGGATTTTATTCTAGACCAAAGGAACTGATAAATAAACAC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTCATAGGGATTTTATTCTAGACCAAAGGAACTGATAAATAAACAC  747

seq1  ACACAGAGCAAACTGAATGTTATCAGATAGTAAAGCCTTTGAGGTAGGGG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGCAAACTGAATGTTATCAGATAGTAAAGCCTTTGAGGTAGGGG  797

seq1  GAGCAAGATAATGACTGAAAATCCACTGTGTTTCCCAGACTGTGCTGGGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGATAATGACTGAAAATCCACTGTGTTTCCCAGACTGTGCTGGGT  847

seq1  TTAGATAGAAAAACACTACATCTTAGAATTCCCCAGTCCTAGATGAATGA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATAGAAAAACACTACATCTTAGAATTCCCCAGTCCTAGATGAATGA  897

seq1  GTACCTGTGTGGACCATTGCCGTTTAAGTATATCTTTAACTGGATAATTA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTGTGTGGACCATTGCCGTTTAAGTATATCTTTAACTGGATAATTA  947

seq1  AATATCCAAAATGTTGCAGGCATTTTGCAAAAAACCCTTTGGAGCATCAT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCAAAATGTTGCAGGCATTTTGCAAAAAACCCTTTGGAGCATCAT  997

seq1  CATGGCACTACCAACAGAACTTTCTTGTCTGACCTCATGTAATGGGGTAG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCACTACCAACAGAACTTTCTTGTCTGACCTCATGTAATGGGGTAG  1047

seq1  AGGCAAAATTCATTTGCACTAAAAGTATTATGTAAAATTGTCTTGAATTT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAATTCATTTGCACTAAAAGTATTATGTAAAATTGTCTTGAATTT  1097

seq1  GTGTGGATAAAGTATATCTGAAACATAAATGAATTC  1128
      ||||||||||||||||||||||||||||||||||||
seq2  GTGTGGATAAAGTATATCTGAAACATAAATGAATTC  1133

seq1: chr7_77478236_77479215
seq2: B6Ng01-323O17.g_71_1052

seq1  GAATTCCTAAGGCCTGTCATCTGCCTGGCCTGGACACACTACCTTAAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAGGCCTGTCATCTGCCTGGCCTGGACACACTACCTTAAGCC  50

seq1  AAATCTATCACTAGTATGGGAATTCAAGTGGAAACCAGCAGGCTCACCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTATCACTAGTATGGGAATTCAAGTGGAAACCAGCAGGCTCACCAG  100

seq1  CATGTCCCCCTTTGGCTCTTTGTGGGCCTTGATCCTCCCCTCGTTCCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCCCCCTTTGGCTCTTTGTGGGCCTTGATCCTCCCCTCGTTCCTTG  150

seq1  CCATTCCCCAGACCAAAGCTTCACCGCTGCTTCACGTTGCTGACAGGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCCCAGACCAAAGCTTCACCGCTGCTTCACGTTGCTGACAGGCCA  200

seq1  ACTGCAGCCCAGTGAATGCAGCCCGTTAGGTGGCCAAATAACACCCCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGCCCAGTGAATGCAGCCCGTTAGGTGGCCAAATAACACCCCCCC  250

seq1  CCCGTTTGTCTTTCTCAACGCTGATTTATAGCAATCGACAGGGTAAAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTTTGTCTTTCTCAACGCTGATTTATAGCAATCGACAGGGTAAAGGC  300

seq1  TCCTCTGACATCATTATTTTTAAAAGATGTCTATTTCTCATCCGTCACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGACATCATTATTTTTAAAAGATGTCTATTTCTCATCCGTCACCT  350

seq1  TTCATCACTTAGCACAAATAAATACTTAAATGAATTGGAAGAGACTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCACTTAGCACAAATAAATACTTAAATGAATTGGAAGAGACTTTCA  400

seq1  GATCATGTTTATAATTCTTGGTTGTCCGTTAACATTCCTAATGACCTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGTTTATAATTCTTGGTTGTCCGTTAACATTCCTAATGACCTGGT  450

seq1  CCTCTGAGTTTCTCTAGAGTCCTAAGTTGGGTTCAAAATCCTGCTGTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAGTTTCTCTAGAGTCCTAAGTTGGGTTCAAAATCCTGCTGTTTC  500

seq1  TGCTTTAAAACTTCGACGAAAGTGGGTGAAGTGGGGGCTAAAAGAGACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTAAAACTTCGACGAAAGTGGGTGAAGTGGGGGCTAAAAGAGACAC  550

seq1  ACAGTTAAGCTGCAAGTTTGCAACACTGTGAGGAGGAAAAAAGTTTCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTAAGCTGCAAGTTTGCAACACTGTGAGGAGGAAAAAAGTTTCCTG  600

seq1  GCAGCCTGAAGGTACAGGCCACTGGGGAAGGAGAACATCGCATGGTTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTGAAGGTACAGGCCACTGGGGAAGGAGAACATCGCATGGTTCAG  650

seq1  GGGACCCACTAGACCCGGAAGCTGAAAAGAGGCCCTCAGAGCATGGGCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCCACTAGACCCGGAAGCTGAAAAGAGGCCCTCAGAGCATGGGCAC  700

seq1  AAATTTTGCACGACTGTTGGTCCTCGGAGCCACACTGCAAAACCACAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTGCACGACTGTTGGTCCTCGGAGCCACACTGCAAAACCACAGTG  750

seq1  ACATCTCCATTATACAGGAGTGCTGCGCAGAGGGACTACCGCCACTATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTCCATTATACAGGAGTGCTGCGCAGAGGGACTACCGCCACTATTA  800

seq1  CTTCTATCATCATTTCCAAAGAGGTCTAAGGGGCATTTCCTCTCCTGCGT  850
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTTCTATCATCATTTCCAAAGAGGTCTAAAGGGCATTTCCTCTCCTGCGT  850

seq1  CTTTATTAGCCTTTATGAGCCTGAGAC-TCGGGAAATGTAGAAGCGAGGT  899
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTTTATTAGCCTTTATGAGCCTGAGACTTCGGGAAATGTAGAAGCGAGGT  900

seq1  GAAAACGAAATCGCATGGATTGAAATCCATGCAATAAATCAAAATTGTTT  949
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAAAACGAAATCGCATGGATTGAAATCCATGCAATAAATCAAATTTGTTT  950

seq1  -CTTCACTTTTTTGCTGCCATTTATTTGGTCT  980
       |||||  ||||||||||||||||||||||||
seq2  CCTTCAACTTTTTGCTGCCATTTATTTGGTCT  982