BAC Information

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BAC

Clone NameB6Ng01-324C07
Chromosome7 (Build37)
Map Location 103,304,195 - 103,305,359
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666823, Frda-ps
Downstream geneEG666836, Odz4, LOC670727, LOC666858, Nars2, Gab2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324C07.bB6Ng01-324C07.g
ACCGA112536GA112537
length1,1651,155
definitionB6Ng01-324C07.b B6Ng01-324C07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggag
caaaacacccttggaaggagttacagagacaaagtttggagttgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctattggatggatcacatggccccca
atgaaaggagctagagaaagtaccaaagagctaaagggatctgcaaccct
atagtggacacattatgaactaaccagtaccccgagctcttgactctagc
tgcatatgcatcaaagatgactagtcgtcatcactgaaagagaggtcatg
actgcaaactttatatgcccagtacaaggaacggcaggcaataaagggag
gtgttggtgtgctta

gaattcacacacaatgacgtcagtcacccttccagtgtcttcatttttct
taggtagggactgagtgttagagaggtggtggagcccgccccatcactaa
aaagtgcaggtctggactggcctctgacttggatatggacacagtgttgc
ttctgatactcggctttgacaggaaccgcaaatgttcagccctcaaaccc
aggctagtgacacagtaaccatggtctgacaacactgctaacacagccag
cagcagcagcactaagccagaggtgaacaatagcctcttgaatagcacat
ctcccatagcccacattcattcataagtttctcaggtagcttggtgaagc
cagaggtcactgtcagctaagtatagagccacacttcataccagctcaca
aatgtccaccccaggtctcagagacatttcctggtaacattctgagctat
gtaattcaattattgccacagctaattttttttgctttctcttctttctc
ttctgttttccatttctctcttccttcctttcctttgtcccattccctcc
ttctctcccttttcttcctcctctctcttttactttctttatttgatcat
ttccctccaaacagggtctcttgtaacccaggctagcctctaattcttgg
tcctcctgcctccacctcatcaagggctgggattgtgctacaatcccagg
gatattttgttaatttgtgttatttatcattttttttctccagtataatt
ccaaaataaggtagattttaatgttcatttaagataccaatacaagtttt
ttttttctatttatactttattattgcctcaatgttattaggcacttggc
agagaaagcatttattttatattattgtttctaatattaacatttcatga
tgcattcaacattactgaaacaataaaaatagatcctttaaattgcctca
agaaatgtgactgaacacagacgttgggtagtggttgcttgatatgtgtc
tgagagcagttatgtgttttgtgaatatcatttcatgacttctaaaaaat
tgatgcttattttatgtgtgcactgtgacctggtccagaatacctggcag
gatcgtcctccttccactgtgtggtactggaatcaaggctctaggctgct
gtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_103304195_103305359
seq2: B6Ng01-324C07.g_68_1222 (reverse)

seq1  CAGA---CAGCCT-GAG-CTTGATTCCCAGTACCCACACAGTGGAAGGAA  45
      ||||   |||||| ||| ||||||| |||||| |||||||||||||||  
seq2  CAGACAGCAGCCTAGAGCCTTGATT-CCAGTA-CCACACAGTGGAAGG--  46

seq1  AGAACTGATTCCTGCAAGGTATCCTTGGACCAGTTCACAAGTTGCACACA  95
      || || || |||||| |||||| | |||||||| |||||   ||||||||
seq2  AGGAC-GA-TCCTGCCAGGTATTC-TGGACCAGGTCACA--GTGCACACA  91

seq1  TAAATAAAGCAATAAATTTTTAAGAAGTCCATGAAATGATATTCAC-AAA  144
      ||||  |||| || ||||||| |||||| ||||||||||||||||| |||
seq2  TAAAATAAGC-ATCAATTTTTTAGAAGT-CATGAAATGATATTCACAAAA  139

seq1  CACATAACTGCTTCTTCAAGACACATATCCAAGCAACCACCTACCAACGT  194
      ||||||||||| |||   |||||||||| |||||||||||   |||||||
seq2  CACATAACTGC-TCT--CAGACACATAT-CAAGCAACCACTACCCAACGT  185

seq1  CTGTGTTCAGTCACCTTTTCTTGAGGCAATTTTAAAGGATCTATTTTTAT  244
      ||||||||||||| | ||||||||||||| ||||||||||||||||||||
seq2  CTGTGTTCAGTCA-CATTTCTTGAGGCAA-TTTAAAGGATCTATTTTTAT  233

seq1  TGTTTCAGTAATGTTGAATGCATCATGAAATGTTAATATTAGAAACAATA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAGTAATGTTGAATGCATCATGAAATGTTAATATTAGAAACAATA  283

seq1  ATATAAAATAAATGCTTTCTCTGCCAAGTGCCTAATAACATTGAGGCAAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAATAAATGCTTTCTCTGCCAAGTGCCTAATAACATTGAGGCAAT  333

seq1  AATAAAGTATAAATAG-AAAAAAAAACTTGTATTGGTATCTTAAATGAAC  393
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AATAAAGTATAAATAGAAAAAAAAAACTTGTATTGGTATCTTAAATGAAC  383

seq1  ATTAAAATCTACCTTATTTTGGAATTATACTGGAGAAAAAAAATGATAAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATCTACCTTATTTTGGAATTATACTGGAGAAAAAAAATGATAAA  433

seq1  TAACACAAATTAACAAAATATCCCTGGGATTGTAGCACAATCCCAGCCCT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAAATTAACAAAATATCCCTGGGATTGTAGCACAATCCCAGCCCT  483

seq1  TGATGAGGTGGAGGCAGGAGGACCAAGAATTAGAGGCTAGCCTGGGTTAC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAGGTGGAGGCAGGAGGACCAAGAATTAGAGGCTAGCCTGGGTTAC  533

seq1  AAGAGACCCTGTTTGGAGGGAAATGATCAAATAAAGAAAGTAAAAGAGAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACCCTGTTTGGAGGGAAATGATCAAATAAAGAAAGTAAAAGAGAG  583

seq1  AGGAGGAAGAAAAGGGAGAGAAGGAGGGAATGGGACAAAGGAAAGGAAGG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAAGAAAAGGGAGAGAAGGAGGGAATGGGACAAAGGAAAGGAAGG  633

seq1  AAGAGAGAAATGGAAAACAGAAGAGAAAGAAGAGAAAGCAAAAAAAATTA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAAATGGAAAACAGAAGAGAAAGAAGAGAAAGCAAAAAAAATTA  683

seq1  GCTGTGGCAATAATTGAATTACATAGCTCAGAATGTTACCAGGAAATGTC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGGCAATAATTGAATTACATAGCTCAGAATGTTACCAGGAAATGTC  733

seq1  TCTGAGACCTGGGGTGGACATTTGTGAGCTGGTATGAAGTGTGGCTCTAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGACCTGGGGTGGACATTTGTGAGCTGGTATGAAGTGTGGCTCTAT  783

seq1  ACTTAGCTGACAGTGACCTCTGGCTTCACCAAGCTACCTGAGAAACTTAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGCTGACAGTGACCTCTGGCTTCACCAAGCTACCTGAGAAACTTAT  833

seq1  GAATGAATGTGGGCTATGGGAGATGTGCTATTCAAGAGGCTATTGTTCAC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAATGTGGGCTATGGGAGATGTGCTATTCAAGAGGCTATTGTTCAC  883

seq1  CTCTGGCTTAGTGCTGCTGCTGCTGGCTGTGTTAGCAGTGTTGTCAGACC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCTTAGTGCTGCTGCTGCTGGCTGTGTTAGCAGTGTTGTCAGACC  933

seq1  ATGGTTACTGTGTCACTAGCCTGGGTTTGAGGGCTGAACATTTGCGGTTC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTACTGTGTCACTAGCCTGGGTTTGAGGGCTGAACATTTGCGGTTC  983

seq1  CTGTCAAAGCCGAGTATCAGAAGCAACACTGTGTCCATATCCAAGTCAGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAAAGCCGAGTATCAGAAGCAACACTGTGTCCATATCCAAGTCAGA  1033

seq1  GGCCAGTCCAGACCTGCACTTTTTAGTGATGGGGCGGGCTCCACCACCTC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTCCAGACCTGCACTTTTTAGTGATGGGGCGGGCTCCACCACCTC  1083

seq1  TCTAACACTCAGTCCCTACCTAAGAAAAATGAAGACACTGGAAGGGTGAC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACACTCAGTCCCTACCTAAGAAAAATGAAGACACTGGAAGGGTGAC  1133

seq1  TGACGTCATTGTGTGTGAATTC  1165
      ||||||||||||||||||||||
seq2  TGACGTCATTGTGTGTGAATTC  1155


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