BAC Information

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BAC

Clone NameB6Ng01-324F13
Chromosome7 (Build37)
Map Location 88,194,196 - 88,320,689
singlet/doubletdoublet
Overlap geneAlpk3, Slc28a1, EG623286
Upstream geneZfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm, Crtc3, Iqgap1, LOC100042402, Zscan2, Wdr73, Nmb, Sec11a, Zfp592
Downstream geneLOC100043130, Pde8a, EG636544, Rps17, Cpeb1, LOC623355, Ap3b2, BC048679, Fsd2, Whdc1, Homer2, 2610204K14Rik, 3110040N11Rik, Btbd1, Tm6sf1, LOC100043161, Hdgfrp3, Bnc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324F13.bB6Ng01-324F13.g
ACCGA112685GA112686
length77394
definitionB6Ng01-324F13.b B6Ng01-324F13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,319,917 - 88,320,689)(88,194,196 - 88,194,289)
sequence
gaattccacctcccacaagtaggttttataggcaattgagtatcagcaac
catgaatcctctaagaaatatgtcctggtggcctcatcctcaaggggcac
ccagcttctgtgggagtaagagatgttaaagtccactgctctgtgactaa
ggagtcccggaaccctgtgtgcaacccccgatcagcagtaccatctccac
agagaagaaccaactctcagagaagttgtgattcattcccatagacctaa
gtccagcaccatgctaggtactttggaagaaaacaaaagcactgtaatgt
ctatgcccaagaagctgccattttaccaggaacatccctggctgtgtaat
gagttcgcatggagcccagagcatcaggacaaggacccaacaggtaagag
aggaagaggtggggagcttgatcttggaaagacagctgtgtgtacagtca
gcaaagggtcctgctcaagggcagtgggagaggggtttggagtttgaatg
gagagctgcaggggaaatggccaggactatagccatggggtacaagagcc
aagccaagcctccatgctgcagagctaagggcccagaggactggaactca
ggtcagctatgggcaaagaaggtgccctcagaacaaagatctatcgcaga
gccaaactggacctaactcatgtggtagaaccagtttctgccacactgga
ctccaagttccctctgcctcaggcaaatctagttctagctggaagggaag
ggggaggtggcaggtaggggtga
tcatgctaggatttggctttaaaatgagaacaaagagaaagtagtcccag
tgagggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_88319917_88320689
seq2: B6Ng01-324F13.b_48_820 (reverse)

seq1  TCACCCCTACCTGCCACCTCCCCCTTCCCTTCCAGCTAGAACTAGATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCCTACCTGCCACCTCCCCCTTCCCTTCCAGCTAGAACTAGATTTG  50

seq1  CCTGAGGCAGAGGGAACTTGGAGTCCAGTGTGGCAGAAACTGGTTCTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGCAGAGGGAACTTGGAGTCCAGTGTGGCAGAAACTGGTTCTACC  100

seq1  ACATGAGTTAGGTCCAGTTTGGCTCTGCGATAGATCTTTGTTCTGAGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGTTAGGTCCAGTTTGGCTCTGCGATAGATCTTTGTTCTGAGGGC  150

seq1  ACCTTCTTTGCCCATAGCTGACCTGAGTTCCAGTCCTCTGGGCCCTTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTTTGCCCATAGCTGACCTGAGTTCCAGTCCTCTGGGCCCTTAGC  200

seq1  TCTGCAGCATGGAGGCTTGGCTTGGCTCTTGTACCCCATGGCTATAGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGCATGGAGGCTTGGCTTGGCTCTTGTACCCCATGGCTATAGTCC  250

seq1  TGGCCATTTCCCCTGCAGCTCTCCATTCAAACTCCAAACCCCTCTCCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCATTTCCCCTGCAGCTCTCCATTCAAACTCCAAACCCCTCTCCCAC  300

seq1  TGCCCTTGAGCAGGACCCTTTGCTGACTGTACACACAGCTGTCTTTCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTTGAGCAGGACCCTTTGCTGACTGTACACACAGCTGTCTTTCCAA  350

seq1  GATCAAGCTCCCCACCTCTTCCTCTCTTACCTGTTGGGTCCTTGTCCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAGCTCCCCACCTCTTCCTCTCTTACCTGTTGGGTCCTTGTCCTGA  400

seq1  TGCTCTGGGCTCCATGCGAACTCATTACACAGCCAGGGATGTTCCTGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGGGCTCCATGCGAACTCATTACACAGCCAGGGATGTTCCTGGTA  450

seq1  AAATGGCAGCTTCTTGGGCATAGACATTACAGTGCTTTTGTTTTCTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCAGCTTCTTGGGCATAGACATTACAGTGCTTTTGTTTTCTTCCA  500

seq1  AAGTACCTAGCATGGTGCTGGACTTAGGTCTATGGGAATGAATCACAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACCTAGCATGGTGCTGGACTTAGGTCTATGGGAATGAATCACAACT  550

seq1  TCTCTGAGAGTTGGTTCTTCTCTGTGGAGATGGTACTGCTGATCGGGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAGAGTTGGTTCTTCTCTGTGGAGATGGTACTGCTGATCGGGGGT  600

seq1  TGCACACAGGGTTCCGGGACTCCTTAGTCACAGAGCAGTGGACTTTAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACAGGGTTCCGGGACTCCTTAGTCACAGAGCAGTGGACTTTAACA  650

seq1  TCTCTTACTCCCACAGAAGCTGGGTGCCCCTTGAGGATGAGGCCACCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTACTCCCACAGAAGCTGGGTGCCCCTTGAGGATGAGGCCACCAGG  700

seq1  ACATATTTCTTAGAGGATTCATGGTTGCTGATACTCAATTGCCTATAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTCTTAGAGGATTCATGGTTGCTGATACTCAATTGCCTATAAAA  750

seq1  CCTACTTGTGGGAGGTGGAATTC  773
      |||||||||||||||||||||||
seq2  CCTACTTGTGGGAGGTGGAATTC  773

seq1: chr7_88194196_88194289
seq2: B6Ng01-324F13.g_72_165

seq1  TCATGCTAGGATTTGGCTTTAAAATGAGAACAAAGAGAAAGTAGTCCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTAGGATTTGGCTTTAAAATGAGAACAAAGAGAAAGTAGTCCCAG  50

seq1  TGAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  94
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  94