BAC Information

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BAC

Clone NameB6Ng01-324H12
Chromosome7 (Build37)
Map Location 33,772,194 - 33,965,973
singlet/doubletdoublet
Overlap geneLOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856
Upstream geneLOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850
Downstream geneLOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1, LOC668440, Abpz, LOC100043860, LOC627079, LOC635803, Abpg, LOC100043864, LOC100043865, Abpb, Abpa, LOC100043866, LOC100043867, LOC100043868, Wtip, Sae2, LOC100043410
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324H12.bB6Ng01-324H12.g
ACCGA112775GA112776
length1,0551,017
definitionB6Ng01-324H12.b B6Ng01-324H12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,772,194 - 33,772,816)(33,964,990 - 33,965,973)
sequence
gaattctgcaagtagaggtatgggggaggtttgaattccccagacaaggt
agagaagtgttagtataagcctattgcatatgcatgccacattatacccg
tgcataaaccagactcagaaagatgtagagagattttagacccaattctg
gtaacttggtaggaattttaacattgagccaggacaaggaagtaggcttc
atgcaagtatttgactttgggccaggatagggaagtaggctcagatatct
tggtcatccagtcaagctcctagaaacagtgattatgggactttgtttac
tgccttgcttattccttaattatttgtgtgtattgccttgtttgtttctt
aacctagaactgaccttattatttgcttgtaattaaaatgatatacaagc
aaacttgggaaaaaacagacctgcttcactctgagagccgcctgcggtca
tgctacaatgttgtccaattttcttttttctttttaatccttgttcctgt
gctggagaacctgtcgactgactgagctgactttttcagatctcatctta
acattggagctctattaagtgggataaattgaagggcacctagggaattg
gatgtgcagagataattctcatagatgctccttgtctttggtccctgagt
agagatagtttacaccctagacatgagagagaataagtttcagaaaagca
gaccttcctgaatgtccatggatggcttgacaatgaatgtaatgttttag
agctcctctaaggaaagacagaggtcaggagacatggtgctcctctctgg
ctactactggaggaatgcttatttctggttctggttcttttatgtaggat
atctgagaccctttggaacatctagttctctcctctctgcctattttctg
tccttggcatgctaatctgcccatgtctgtcagtttatgtctttgttttt
gtttcattctttgttgcactgtgtttcatgttcaaaagaaaatcattgtt
aaaacataactgctggttgtcatccttgatttctttttaaatcactgaaa
aaaaa
gaattcacaggggagcactggatcctctggaactggagttacagatggtt
gttaactactatgtgggtagtgggaagtgattctgtgtccttttaatatc
tgaaaccaccttatattttttgagacagggcctcttactggagcttggta
atggctaaatggactgtccagtaagctctctggtgctggagttaccaggg
gtcactttgtgccaagctgtcctcacaatttcagaggtttggaaaccatg
gattcaagagtgtataccaagcaactacttcacttactggcctgtccccc
aagctcaccctactgctttcttgagaacatagggctcacagtgaaggact
gaagggggatatactcccaggagaaacatctatagatcctctggaattcg
tctgtgagatgtaagaacactgactttcatccatgctcatttatatgcca
caaaaccattcacaacagcatggttttataagttatttcaaaattctagt
acaatccaatatcatgttgtttaggttttttttttccatttttattaggt
atttagctcatttaaatttccaatgctataccaaaagtcccctcataccc
acccacccccactcccctacccaaccactccccctttttggccctggcgt
ttcccctatactggggcatataatatttgcgtgtccaatgggcctctctt
tccagtaatggccgactaggccatcttttgatacatatgcagctagagtc
aagagctccggggtactggatagtacataatgttgttcccacctataggg
tttgcagaatcccttttagctccttggtacttttctctagctccttccat
tgggagccctgtgatccatccattagctgactgtgagcatccactttctg
tgtttcctaggcctcggcatagtcttatcagagacagcttacatcttggg
tccttttcaataaaatattgctaagatagcaatggttgtcagcgatggaa
tggcgaattattggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33772194_33772816
seq2: B6Ng01-324H12.b_48_670

seq1  GAATTCTGCAAGTAGAGGTATGGGGGAGGTTTGAATTCCCCAGACAAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCAAGTAGAGGTATGGGGGAGGTTTGAATTCCCCAGACAAGGT  50

seq1  AGAGAAGTGTTAGTATAAGCCTATTGCATATGCATGCCACATTATACCCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGTGTTAGTATAAGCCTATTGCATATGCATGCCACATTATACCCG  100

seq1  TGCATAAACCAGACTCAGAAAGATGTAGAGAGATTTTAGACCCAATTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAAACCAGACTCAGAAAGATGTAGAGAGATTTTAGACCCAATTCTG  150

seq1  GTAACTTGGTAGGAATTTTAACATTGAGCCAGGACAAGGAAGTAGGCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTTGGTAGGAATTTTAACATTGAGCCAGGACAAGGAAGTAGGCTTC  200

seq1  ATGCAAGTATTTGACTTTGGGCCAGGATAGGGAAGTAGGCTCAGATATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAGTATTTGACTTTGGGCCAGGATAGGGAAGTAGGCTCAGATATCT  250

seq1  TGGTCATCCAGTCAAGCTCCTAGAAACAGTGATTATGGGACTTTGTTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATCCAGTCAAGCTCCTAGAAACAGTGATTATGGGACTTTGTTTAC  300

seq1  TGCCTTGCTTATTCCTTAATTATTTGTGTGTATTGCCTTGTTTGTTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGCTTATTCCTTAATTATTTGTGTGTATTGCCTTGTTTGTTTCTT  350

seq1  AACCTAGAACTGACCTTATTATTTGCTTGTAATTAAAATGATATACAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGAACTGACCTTATTATTTGCTTGTAATTAAAATGATATACAAGC  400

seq1  AAACTTGGGAAAAAACAGACCTGCTTCACTCTGAGAGCCGCCTGCGGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGGGAAAAAACAGACCTGCTTCACTCTGAGAGCCGCCTGCGGTCA  450

seq1  TGCTACAATGTTGTCCAATTTTCTTTTTTCTTTTTAATCCTTGTTCCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACAATGTTGTCCAATTTTCTTTTTTCTTTTTAATCCTTGTTCCTGT  500

seq1  GCTGGAGAACCTGTCGACTGACTGAGCTGACTTTTTCAGATCTCATCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGAACCTGTCGACTGACTGAGCTGACTTTTTCAGATCTCATCTTA  550

seq1  ACATTGGAGCTCTATTAAGTGGGATAAATTGAAGGGCACCTAGGGAATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGAGCTCTATTAAGTGGGATAAATTGAAGGGCACCTAGGGAATTG  600

seq1  GATGTGCAGAGATAATTCTCATA  623
      |||||||||||||||||||||||
seq2  GATGTGCAGAGATAATTCTCATA  623

seq1: chr7_33964990_33965973
seq2: B6Ng01-324H12.g_64_1057 (reverse)

seq1  CGCTGAC-ACCATTGCATATACTAGCAATATTTTATCG-AAAGGACCC-A  47
      ||||||| |||||||| |||  |||||||||||||| | ||||||||| |
seq2  CGCTGACAACCATTGC-TATCTTAGCAATATTTTATTGAAAAGGACCCAA  49

seq1  GATGT-AGCTGTCTCTTGTTAGACTATGCCGGGGCCTAGGAAACACAG-A  95
      ||||| ||||||||||  | ||||||||||| |||||||||||||||| |
seq2  GATGTAAGCTGTCTCTGATAAGACTATGCCGAGGCCTAGGAAACACAGAA  99

seq1  AGTGGATGCTCACAGTCAGCTAATGGATGGATCACAGGGCTCCCAATGG-  144
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGTGGATGCTCACAGTCAGCTAATGGATGGATCACAGGGCTCCCAATGGA  149

seq1  AGGAGCTAGAG-AAAGTACCCAAGGAGCT-AAAGGGA-TCTGC-AACCCT  190
      ||||||||||| |||||| |||||||||| ||||||| ||||| ||||||
seq2  AGGAGCTAGAGAAAAGTA-CCAAGGAGCTAAAAGGGATTCTGCAAACCCT  198

seq1  ATAGGT-GGAACAACATTATGTACTATCCAGTACCCCGGAGCTCTTGACT  239
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTGGGAACAACATTATGTACTATCCAGTACCCCGGAGCTCTTGACT  248

seq1  CTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATTACTGGAAAGA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATTACTGGAAAGA  298

seq1  GAGGCCCATTGGACACGCAAATATTATATGCCCCAGTATAGGGG-AACGC  338
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAGGCCCATTGGACACGCAAATATTATATGCCCCAGTATAGGGGAAACGC  348

seq1  CAGGGCCAAAAAGGGGGAGTGGTTGGGTAGGGGAGTGGGGGTGGGTGGGT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCCAAAAAGGGGGAGTGGTTGGGTAGGGGAGTGGGGGTGGGTGGGT  398

seq1  ATGAGGGGACTTTTGGTATAGCATTGGAAATTTAAATGAGCTAAATACCT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGGGACTTTTGGTATAGCATTGGAAATTTAAATGAGCTAAATACCT  448

seq1  AATAAAAATGGAAAAAAAAAACCTAAACAACATGATATTGGATTGTACTA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAATGGAAAAAAAAAACCTAAACAACATGATATTGGATTGTACTA  498

seq1  GAATTTTGAAATAACTTATAAAACCATGCTGTTGTGAATGGTTTTGTGGC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGAAATAACTTATAAAACCATGCTGTTGTGAATGGTTTTGTGGC  548

seq1  ATATAAATGAGCATGGATGAAAGTCAGTGTTCTTACATCTCACAGACGAA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATGAGCATGGATGAAAGTCAGTGTTCTTACATCTCACAGACGAA  598

seq1  TTCCAGAGGATCTATAGATGTTTCTCCTGGGAGTATATCCCCCTTCAGTC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAGGATCTATAGATGTTTCTCCTGGGAGTATATCCCCCTTCAGTC  648

seq1  CTTCACTGTGAGCCCTATGTTCTCAAGAAAGCAGTAGGGTGAGCTTGGGG  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTGTGAGCCCTATGTTCTCAAGAAAGCAGTAGGGTGAGCTTGGGG  698

seq1  GACAGGCCAGTAAGTGAAGTAGTTGCTTGGTATACACTCTTGAATCCATG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCCAGTAAGTGAAGTAGTTGCTTGGTATACACTCTTGAATCCATG  748

seq1  GTTTCCAAACCTCTGAAATTGTGAGGACAGCTTGGCACAAAGTGACCCCT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCAAACCTCTGAAATTGTGAGGACAGCTTGGCACAAAGTGACCCCT  798

seq1  GGTAACTCCAGCACCAGAGAGCTTACTGGACAGTCCATTTAGCCATTACC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACTCCAGCACCAGAGAGCTTACTGGACAGTCCATTTAGCCATTACC  848

seq1  AAGCTCCAGTAAGAGGCCCTGTCTCAAAAAATATAAGGTGGTTTCAGATA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCAGTAAGAGGCCCTGTCTCAAAAAATATAAGGTGGTTTCAGATA  898

seq1  TTAAAAGGACACAGAATCACTTCCCACTACCCACATAGTAGTTAACAACC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGGACACAGAATCACTTCCCACTACCCACATAGTAGTTAACAACC  948

seq1  ATCTGTAACTCCAGTTCCAGAGGATCCAGTGCTCCCCTGTGAATTC  984
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAACTCCAGTTCCAGAGGATCCAGTGCTCCCCTGTGAATTC  994