BAC Information

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BAC

Clone NameB6Ng01-325C14
Chromosome7 (Build37)
Map Location 82,418,217 - 82,561,454
singlet/doubletdoublet
Overlap gene1500012K07Rik, LOC100042171
Upstream geneSlco3a1, EG665308, EG665641, 0610006L08Rik, Sv2b
Downstream geneAkap13, Klhl25, LOC100042210, LOC434200, EG244071
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325C14.bB6Ng01-325C14.g
ACCGA113290GA113291
length1,1811,045
definitionB6Ng01-325C14.b B6Ng01-325C14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,560,269 - 82,561,454)(82,418,217 - 82,419,256)
sequence
gaattcttttaatcttgttttgggagctgtccatatagtgtgctccatag
ccaaaggatgcttcagaccagatctcttcctgggacgtggtctgtggaga
gtccaaggtcattcagtgcagccggtgctttctgggttctcctgtcacca
agaaggatgtgtgagcagcagcatctctgaaccatgagattggtcggaca
tgtggctttggcctgtgacctcttgcgcttcctccttgagcttcagtgaa
ccacatcagagaaagtgtccaatattttcagtgtcagaagctcatagatt
ttagaatcttgatgcactcagactaacctgtatggcacgagacactagaa
ccctctaaagacagcaccctaaaccacgaagtgtgcattttatttaatct
cctattttctactctgcttccgtattagttctggggtgaggttgtgattc
cattacctaagacctgtgggctgaagaacaagtcatgtgacttcctggtc
ttcagctttctcatttgaatctcaggactgtaagctgaatcaataaatgg
ggtgtggtgttgcacacttgtaattcctgaagtgaggcaggaaggtcaga
aaaccaagatcttcagccatctagccagttgaatccagcttgggctttac
caggcaggctctgtctcaaaacacaaaaccaaaacaaaaaccatgaaggg
cctagaaacagcctggttactgggaaagggctagtaactacctggttacc
acaagggatcagtaaactatgctctttccctttgttgctgtcattcagtc
cacgtgctcccttttcaaagctattatcagacttccctggagtctgtgtt
acgcaatttacagataagccagtcaaacagaaaaggaatgaaagggatgg
gccagaaaaccatgggacagagcctcgggacaggcagtggagtggaaaac
cttgggctttggaattccactggccttgagtctcacttccattagttctc
agacagaaaagctttggggcaatcctcatatcccagacagtcatctcaat
aatgataaaccagttatgttgaatggtgttactgtgaggataataaaaca
agggatgtctacaaggaactagcactcagtagctttcacctttgtttaga
aaggtcaacatagcctgcaaggccagggctg

gaattctgaattcctaactcaatattgctcatgaggcacacttccagagc
cactgacacagatcattaagaccaacctccaggtgaaagccagttctttc
atgcccatcaaatttcagaaacaggaggaggagacagaatcttgaagcca
gatatgccaagatccccattgtcagagatcccatgggatctaattcccca
aggcagtcttggttggtgactgctgctgtccgttttcacctgtgaattat
ttagcatctcccttcatcctgaaagtggctttgttttcatgcctctctaa
acatcctaatactctcaaatatctgcttcattctggcctgtaggaatccc
tcatctgtaatggaaagtgatttccttcagggaaagcctgcttttgtttt
cttggggatcagggagacatggggactctgcaggtcacttcagctggcac
agcatgaggaatccctgcttcttgttccccagctgaccacagttttgcat
ccttgccacagtgttgaaagctgtgtttgccctttggaggctgctacatc
cactccagtagtgactcgcattacaagtttggaaacctggaagcagtcct
gaagcaaagagtttcaaggaaactcagcctcctggaaccttggcattccc
atagctagaatgccccagatttgtctctgcaatatcgtagagggtcttgc
atgcttggttacagtattttactggataagagttagaaatctcagggcaa
gcttaacaaagtatacttagaatcttcattacagccaggtatagcagact
acattgcataatagaagcaagttggtgaatacttctgacaaatggagatg
ccctacagatacttaaaagaatagccaagttacctttatatgtaagaatt
taccaaggcctaggaatagggggttgtggtattgcattattcagagaagg
tctgctagagcagaacccctgtgctagctttcacagcccaaaggagtagc
acaaatgtgactaggatgagaatcttacctgtcattagctgacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_82560269_82561454
seq2: B6Ng01-325C14.b_43_1223 (reverse)

seq1  CAGCCCTGACCTTGCA-GCTATGTTGACTTTTCTAAACAAA-GTGAAAGC  48
      |||||||| ||||||| ||||||||||| |||||||||||| ||||||||
seq2  CAGCCCTGGCCTTGCAGGCTATGTTGACCTTTCTAAACAAAGGTGAAAGC  50

seq1  CTTACTGAGTGCTAGGTTCCTTGTAGACATCCC-TGTTTTATTTATCCTC  97
        |||||||||||| |||||||||||||||||| ||||||| ||||||||
seq2  --TACTGAGTGCTA-GTTCCTTGTAGACATCCCTTGTTTTA-TTATCCTC  96

seq1  ACAGTAACAACCATCAACAATAACTGGTTTTATCATTATTGAGATTGACT  147
      ||||||||| |  ||||| |||||||| |||||||||||||||| |||||
seq2  ACAGTAACACCATTCAAC-ATAACTGG-TTTATCATTATTGAGA-TGACT  143

seq1  GTCTGGGATATGAAGGAATTGCCCCAAAGC-TTTCTGTCTGAGAACTAAT  196
      |||||||||||||  | ||||||||||||| |||||||||||||||||||
seq2  GTCTGGGATATGA--GGATTGCCCCAAAGCTTTTCTGTCTGAGAACTAAT  191

seq1  GGAAGTGAGACTCAAGGCCAGTGGAATTCCAAAGCCCAAGGTTTTCCACT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGAGACTCAAGGCCAGTGGAATTCCAAAGCCCAAGGTTTTCCACT  241

seq1  CCACTGCCTGTCCCGAGGCTCTGTCCCATGGTTTTCTGGCCCATCCCTTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCCTGTCCCGAGGCTCTGTCCCATGGTTTTCTGGCCCATCCCTTT  291

seq1  CATTCCTTTTCTGTTTGACTGGCTTATCTGTAAATTGCGTAACACAGACT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTTTTCTGTTTGACTGGCTTATCTGTAAATTGCGTAACACAGACT  341

seq1  CCAGGGAAGTCTGATAATAGCTTTGAAAAGGGAGCACGTGGACTGAATGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGAAGTCTGATAATAGCTTTGAAAAGGGAGCACGTGGACTGAATGA  391

seq1  CAGCAACAAAGGGAAAGAGCATAGTTTACTGATCCCTTGTGGTAACCAGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACAAAGGGAAAGAGCATAGTTTACTGATCCCTTGTGGTAACCAGG  441

seq1  TAGTTACTAGCCCTTTCCCAGTAACCAGGCTGTTTCTAGGCCCTTCATGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTACTAGCCCTTTCCCAGTAACCAGGCTGTTTCTAGGCCCTTCATGG  491

seq1  TTTTTGTTTTGGTTTTGTGTTTTGAGACAGAGCCTGCCTGGTAAAGCCCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTGGTTTTGTGTTTTGAGACAGAGCCTGCCTGGTAAAGCCCA  541

seq1  AGCTGGATTCAACTGGCTAGATGGCTGAAGATCTTGGTTTTCTGACCTTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGATTCAACTGGCTAGATGGCTGAAGATCTTGGTTTTCTGACCTTC  591

seq1  CTGCCTCACTTCAGGAATTACAAGTGTGCAACACCACACCCCATTTATTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCACTTCAGGAATTACAAGTGTGCAACACCACACCCCATTTATTG  641

seq1  ATTCAGCTTACAGTCCTGAGATTCAAATGAGAAAGCTGAAGACCAGGAAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGCTTACAGTCCTGAGATTCAAATGAGAAAGCTGAAGACCAGGAAG  691

seq1  TCACATGACTTGTTCTTCAGCCCACAGGTCTTAGGTAATGGAATCACAAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGACTTGTTCTTCAGCCCACAGGTCTTAGGTAATGGAATCACAAC  741

seq1  CTCACCCCAGAACTAATACGGAAGCAGAGTAGAAAATAGGAGATTAAATA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCCAGAACTAATACGGAAGCAGAGTAGAAAATAGGAGATTAAATA  791

seq1  AAATGCACACTTCGTGGTTTAGGGTGCTGTCTTTAGAGGGTTCTAGTGTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCACACTTCGTGGTTTAGGGTGCTGTCTTTAGAGGGTTCTAGTGTC  841

seq1  TCGTGCCATACAGGTTAGTCTGAGTGCATCAAGATTCTAAAATCTATGAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGCCATACAGGTTAGTCTGAGTGCATCAAGATTCTAAAATCTATGAG  891

seq1  CTTCTGACACTGAAAATATTGGACACTTTCTCTGATGTGGTTCACTGAAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGACACTGAAAATATTGGACACTTTCTCTGATGTGGTTCACTGAAG  941

seq1  CTCAAGGAGGAAGCGCAAGAGGTCACAGGCCAAAGCCACATGTCCGACCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGAGGAAGCGCAAGAGGTCACAGGCCAAAGCCACATGTCCGACCA  991

seq1  ATCTCATGGTTCAGAGATGCTGCTGCTCACACATCCTTCTTGGTGACAGG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATGGTTCAGAGATGCTGCTGCTCACACATCCTTCTTGGTGACAGG  1041

seq1  AGAACCCAGAAAGCACCGGCTGCACTGAATGACCTTGGACTCTCCACAGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCAGAAAGCACCGGCTGCACTGAATGACCTTGGACTCTCCACAGA  1091

seq1  CCACGTCCCAGGAAGAGATCTGGTCTGAAGCATCCTTTGGCTATGGAGCA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGTCCCAGGAAGAGATCTGGTCTGAAGCATCCTTTGGCTATGGAGCA  1141

seq1  CACTATATGGACAGCTCCCAAAACAAGATTAAAAGAATTC  1186
      ||||||||||||||||||||||||||||||||||||||||
seq2  CACTATATGGACAGCTCCCAAAACAAGATTAAAAGAATTC  1181


seq1: chr7_82418217_82419256
seq2: B6Ng01-325C14.g_67_1096

seq1  GAATTCTGAATTCCTAACTCAATATTGCTCATGAGGCACACTTCCAGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAATTCCTAACTCAATATTGCTCATGAGGCACACTTCCAGAGC  50

seq1  CACTGACACAGATCATTAAGACCAACCTCCAGGTGAAAGCCAGTTCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGACACAGATCATTAAGACCAACCTCCAGGTGAAAGCCAGTTCTTTC  100

seq1  ATGCCCATCAAATTTCAGAAACAGGAGGAGGAGACAGAATCTTGAAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCATCAAATTTCAGAAACAGGAGGAGGAGACAGAATCTTGAAGCCA  150

seq1  GATATGCCAAGATCCCCATTGTCAGAGATCCCATGGGATCTAATTCCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGCCAAGATCCCCATTGTCAGAGATCCCATGGGATCTAATTCCCCA  200

seq1  AGGCAGTCTTGGTTGGTGACTGCTGCTGTCCGTTTTCACCTGTGAATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGTCTTGGTTGGTGACTGCTGCTGTCCGTTTTCACCTGTGAATTAT  250

seq1  TTAGCATCTCCCTTCATCCTGAAAGTGGCTTTGTTTTCATGCCTCTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATCTCCCTTCATCCTGAAAGTGGCTTTGTTTTCATGCCTCTCTAA  300

seq1  ACATCCTAATACTCTCAAATATCTGCTTCATTCTGGCCTGTAGGAATCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTAATACTCTCAAATATCTGCTTCATTCTGGCCTGTAGGAATCCC  350

seq1  TCATCTGTAATGGAAAGTGATTTCCTTCAGGGAAAGCCTGCTTTTGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGTAATGGAAAGTGATTTCCTTCAGGGAAAGCCTGCTTTTGTTTT  400

seq1  CTTGGGGATCAGGGAGACATGGGGACTCTGCAGGTCACTTCAGCTGGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGGATCAGGGAGACATGGGGACTCTGCAGGTCACTTCAGCTGGCAC  450

seq1  AGCATGAGGAATCCCTGCTTCTTGTTCCCCAGCTGACCACAGTTTTGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGAGGAATCCCTGCTTCTTGTTCCCCAGCTGACCACAGTTTTGCAT  500

seq1  CCTTGCCACAGTGTTGAAAGCTGTGTTTGCCCTTTGGAGGCTGCTACATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCCACAGTGTTGAAAGCTGTGTTTGCCCTTTGGAGGCTGCTACATC  550

seq1  CACTCCAGTAGTGACTCGCATTACAAGTTTGGAAACCTGGAAGCAGTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCAGTAGTGACTCGCATTACAAGTTTGGAAACCTGGAAGCAGTCCT  600

seq1  GAAGCAAAGAGTTTCAAGGAAACTCAGCCTCCTGGAACCTTGGCATTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAAAGAGTTTCAAGGAAACTCAGCCTCCTGGAACCTTGGCATTCCC  650

seq1  ATAGCTAGAATGCCCCAGATTTGTCTCTGCAATATCGTAGAGGGTCTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTAGAATGCCCCAGATTTGTCTCTGCAATATCGTAGAGGGTCTTGC  700

seq1  ATGCTTGGTTACAGTATTTTACTGGATAAGAGTTAGAAATCTCAGGGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGGTTACAGTATTTTACTGGATAAGAGTTAGAAATCTCAGGGCAA  750

seq1  GCTTAACAAAGTATACTTAGAATCTTCATTACAGCCAGGTATAGCAGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAACAAAGTATACTTAGAATCTTCATTACAGCCAGGTATAGCAGACT  800

seq1  ACATTGCATAATAGAAGCAAGTTGGTGAATACTTCTGACAAATGGAGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCATAATAGAAGCAAGTTGGTGAATACTTCTGACAAATGGAGATG  850

seq1  CCCTACAGATACTTAAAAGAATAGCCAAGTTACCTTTATATGTAAGAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACAGATACTTAAAAGAATAGCCAAGTTACCTTTATATGTAAGAATT  900

seq1  TACCAAGGCCTAGGAAATAGGGGGGTTGTGGTATTGCATTATTCAGGAGA  950
      |||||||||||||| |||| ||||||||||||||||||||||||| ||||
seq2  TACCAAGGCCTAGG-AATA-GGGGGTTGTGGTATTGCATTATTCA-GAGA  947

seq1  AGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCCCAAAG  1000
      ||||||||||||||||||||||   |||||||||||||||  ||||||||
seq2  AGGTCTGCTAGAGCAGAACCCC--TGTGCTAGCTTTCACA--GCCCAAAG  993

seq1  GAGTAGCACAAATTGTGACTAGGATGAGAAATCCTTACCT  1040
      |||||||||||| |||||||||||||||||   |||||||
seq2  GAGTAGCACAAA-TGTGACTAGGATGAGAA--TCTTACCT  1030


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