BAC Information

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BAC

Clone NameB6Ng01-325K16
Chromosome7 (Build37)
Map Location 105,563,587 - 105,564,481
singlet/doubletsinglet
Overlap genenone
Upstream geneThrsp, Kctd14, Ints4, 1810020D17Rik, Rsf1, LOC622994, LOC100040211, Clns1a, Aqp11, LOC100040594, Pak1, Gdpd4, Myo7a, Capn5, Omp, B3gnt6, Phca, Tsku, LOC100040269
Downstream geneGucy2d, LOC100040721, EG434215, A630091E08Rik, 2210018M11Rik, LOC100040769, Prkrir, Wnt11, LOC666978, Uvrag, EG666529, Dgat2, Mogat2, Mtap6, Serpinh1, Gdpd5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325K16.bB6Ng01-325K16.g
ACCGA113667GA113668
length1,240898
definitionB6Ng01-325K16.b B6Ng01-325K16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgagtaccgctggcttctacagactctagatacctgggttggt
gaccttagctgccctgttgtatcccctaaccaaggaagggaagatgtttg
tgtggaccccagatcaccagaaagcctttaaagaaattaaaaaggcccta
ctgacagccagccttggcctttgcctgacccaaccaagcccttcattctt
tatgtggaagagagagcaagagtcgccagaggagtccttgctcagacttt
gggactttaaaaaaggccagtggcttacctatccaagaagttagaccctg
ttgctagcgggtggttttcttgcttgaaagctattgctgccatagctctg
cttggcaagatgttaataagctcactctgggacagcaaacaactgtagtg
gcaccccacactcttgaaagcattacccgaaagcaccctgactgatggat
gacgagttaccctactgtccaagacttcacctactcatcactgtgctgac
attctggcagaagaaactggtactcgaaatgatctgaaggatcagatcag
ccttggcctaagagttcgagctggtacaaggatggcagtagcctcgcggt
tgaagacaccttttcaaggtgggtagaagcttttccaaccaggactgaga
cagccaatgtgatagccaagaagatcctagaagaaatcttcccgaggttt
gggatacccaaggtaatcaggtccaataatggacttgcctttgttgccca
ggtaaatcagggactggccaagatattagagattaattagaagttacatt
gtgcatacaggctccaaagctcaagacaggtagaaaagataaatagaatt
ctaaaagagactggtgcagacttggtgctccttccccatgccctatttag
aactagaaatactccctttttgattcagccttactctttaagatcctttt
atggggctcccatgcccataactgtcttaaatgatgtgtttaaacctaca
tgtgtgtaataataatctgtatgtaagttaaaggcttgccaggtggtgca
gaaaaaagtctggtcacattggctacagcgaatgagctgggtaccccaga
agaacatctcacagttcaggcgagagatctggattcctctgttaccttac
atcaatgccgaaccctcgaggcctcactagaaggtcctgcctaagttctg
tttacatatcccctctaattgtgttgaatttctcattctc
gaattcccacatccagtatctcaatcctttcttactcatctcccttgcca
cctcctgcttggcttttcttacaccccatgtcctgggggctaattctttc
cagatgtctaatagcctagccggcagatagaggtgtttgaggaacgcagc
cctctggggaaaatcagcctagtaaggggattgctccctggtcaggacac
taggtctgtaagaaacaggaagaggcccaggctgcctctacagggtggag
gtgtgatattgctaggctggaaagggcccagaagacattacccatgagtc
atagctgtcccactactatttcagcaaagcaatgttaggaaattgttagt
ctagcacatgcctgctgaccttcgtggagcctgaccagtgggggaagtgt
gaaggagacagacaggattcaggcttcttggggcaggtaaaggacttggg
gaagctgagagtcaccgtttgccaggctggaggaggggaagacctgggta
ggggacagtatggctggttggacaggagtatagagggaggaaggagcttc
ggaggtttctataaaacaaagaccaggagggaatgactgagagagcagtg
tggagacatagcaggtggaagtcagagatagaagatgaaatcaggacagc
agaaatggctccatggataaaacactggctgagcaaacatggaacctgag
ttcagggcccggaacccacaaaagagccagctagagtcaggattcgcagg
cctgtgatcctaatgttcccacagtgaggtggaagggcagaggcggagac
cagaaactctcaggccaagttagcctgccctgaggcaagtgacaaataac
agaccctctctcagacaaggtggaaggtgaggattgatactcaagatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_105563587_105564481
seq2: B6Ng01-325K16.g_69_966 (reverse)

seq1  AATCTTGAGTATCAATCCTCACCTTCCACCTTGTCTGAGAGAGGGTCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGAGTATCAATCCTCACCTTCCACCTTGTCTGAGAGAGGGTCTGT  50

seq1  TATTTGTCACTTGCCTCAGGGCAGGCT-ACTTGGCCTGAGAGTTTCTGGT  99
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TATTTGTCACTTGCCTCAGGGCAGGCTAACTTGGCCTGAGAGTTTCTGGT  100

seq1  CTCCGCCTCTGCCCTTCCACCTCACTGTGGGAACATTAGGATCACAGGCC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGCCTCTGCCCTTCCACCTCACTGTGGGAACATTAGGATCACAGGCC  150

seq1  TGCGAATCCTGACTCTAGCTGGCTC-TTTGTGGGTTCCGGGCCCTGAACT  198
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGCGAATCCTGACTCTAGCTGGCTCTTTTGTGGGTTCCGGGCCCTGAACT  200

seq1  CAGGTTCCATGTTTGCTCAGCCAGTGTTTTATCCATGGAGCCATTTCTGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCCATGTTTGCTCAGCCAGTGTTTTATCCATGGAGCCATTTCTGC  250

seq1  TGTCCTGATTTCATCTTCTATCTCTGACTTCCACCTGCTATGTCTCCACA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGATTTCATCTTCTATCTCTGACTTCCACCTGCTATGTCTCCACA  300

seq1  CTGCTCTCTCAGTCATTCCCTCCTGGTCTTTGTTTTATAG-AACCTCCGA  347
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTGCTCTCTCAGTCATTCCCTCCTGGTCTTTGTTTTATAGAAACCTCCGA  350

seq1  AGCTCCTTCCTCCCTCTATACTCCTGTCCAACCAGCCATACTGTCCCCTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTTCCTCCCTCTATACTCCTGTCCAACCAGCCATACTGTCCCCTA  400

seq1  CCCAGGTCTTCCCCTCCTCCAGCCTGGCAAACGGTGACTCTCAGCTTCCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTCTTCCCCTCCTCCAGCCTGGCAAACGGTGACTCTCAGCTTCCC  450

seq1  CAAGTCCTTTACCTGCCCCAAGAAGCCTGAATCCTGTCTGTCTCCTTCAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCCTTTACCTGCCCCAAGAAGCCTGAATCCTGTCTGTCTCCTTCAC  500

seq1  ACTTCCCCCACTGGTCAGGCTCCACGAAGGTCAGCAGGCATGTGCTAGAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCCCACTGGTCAGGCTCCACGAAGGTCAGCAGGCATGTGCTAGAC  550

seq1  TAACAATTTCCTAACATTGCTTTGCTGAAATAGTAGTGGGACAGCTATGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATTTCCTAACATTGCTTTGCTGAAATAGTAGTGGGACAGCTATGA  600

seq1  CTCATGGGTAATGTCTTCTGGGCCCTTTCCAGCCTAGCAATATCACACCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGGGTAATGTCTTCTGGGCCCTTTCCAGCCTAGCAATATCACACCT  650

seq1  CCACCCTGTAGAGGCAGCCTGGGCCTCTTCCTGTTTCTTACAGACCTAGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTGTAGAGGCAGCCTGGGCCTCTTCCTGTTTCTTACAGACCTAGT  700

seq1  GTCCTGACCAGGGAGCAATCCCCTTACTAGGCTGATTTTCCCCAGAGGGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGACCAGGGAGCAATCCCCTTACTAGGCTGATTTTCCCCAGAGGGC  750

seq1  TGCGTTCCTCAAACACCTCTATCTGCCGGCTAGGCTATTAGACATCTGGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTTCCTCAAACACCTCTATCTGCCGGCTAGGCTATTAGACATCTGGA  800

seq1  AAGAATTAGCCCCCAGGACATGGGGTGTAAGAAAAGCCAAGCAGGAGGTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTAGCCCCCAGGACATGGGGTGTAAGAAAAGCCAAGCAGGAGGTG  850

seq1  GCAAGGGAGATGAGTAAGAAAGGATTGAGATACTGGATGTGGGAATTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGGAGATGAGTAAGAAAGGATTGAGATACTGGATGTGGGAATTC  898