BAC Information

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BAC

Clone NameB6Ng01-325K18
Chromosome7 (Build37)
Map Location 32,263,367 - 32,264,409
singlet/doubletsinglet
Overlap genenone
Upstream geneNphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181
Downstream geneLOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325K18.bB6Ng01-325K18.g
ACCGA113671GA113672
length1,1851,045
definitionB6Ng01-325K18.b B6Ng01-325K18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagttacaatttcctaaagacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagcgggaa
caaatcacccttggaaggagttacagagacaaagtttggagctgagatta
aagggtggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatggatggatcacagggctccca
atggaggagctagaagaaagtacccaaggagctaaagggatctgcaaccc
tatagtggatcacattatgaactaaccagtacccggagctctgactctag
ctgcatatgtatcaaagatggcttagtcggcatcactgggaaagagaggc
catgacccacaaactttatatgcccaagaaacagggacggccaggtcaaa
agggggattggccagggtagtgtaatgtgcgcgtg
gaattctctttttctttttcctcctctcccctggctgatggaagtgcatc
cctgttttctcttctacccagcctttggtacatcagtttttattaacaca
tcagagaataaattgttcaataagagacctggtctcaaataattagttga
agactgttgagatagctcagtgagtaaaggtgcactgattgaagttgaac
acctgagttcaaattctagaacccaactggcagaagagaagtaacttctt
aaattgtcatttgaccttccaacgtaaacacacacacacacacacacctt
gatacctctgtccatacacaggcacagacacacaagcacacaaacacatg
aacacacacctacaaatgtctgtgaaaactggcatcattaagcattaaga
agctcctaatggaaaaaaaaaaagaaacaattgacaaacaaactaaataa
cattatattaggttgtactatataatggtataatatcctataaacccata
ttggtgtgaatggttgcatggtaggtaattgagcatgacttaacctggcg
tgacctggtgggacccagaggtctctccattccgcaagacctctagcaca
cccaggacatcacaatcatgggtgagtggaacagaacatcagcaccaaag
aatcccagagggtcttgtgccagctgcacgagggacaaaggaaccctgaa
tgaccagaaactgggattcattctggttggggccagccccctatattctt
cctgaacccagcagagggagccaaggacccagaggactctccacaccaca
ggacccctagcacatagaaaacctaggcatcatgggactcaggaagtgaa
tcggagctacagacttctggaaacctgccctgcaagaggagagcttgcct
gcagagagtgctctggccactgtgactcaaggtgagagttgggactccca
ggactgccgaaaaaggctatcagaatcaaagaaggagcaagcttcagcca
gaagacagctaaatctctaacaccagagattacgagatggccaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_32263367_32264409
seq2: B6Ng01-325K18.g_67_1111

seq1  GAATTCTCTTTTTCTTTTTCCTCCTCTCCCCTGGCTGATGGAAGTGCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTTTCTTTTTCCTCCTCTCCCCTGGCTGATGGAAGTGCATC  50

seq1  CCTGTTTTCTCTTCTACCCAGCCTTTGGTACATCAGTTTTTATTAACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTTCTCTTCTACCCAGCCTTTGGTACATCAGTTTTTATTAACACA  100

seq1  TCAGAGAATAAATTGTTCAATAAGAGACCTGGTCTCAAATAATTAGTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAATAAATTGTTCAATAAGAGACCTGGTCTCAAATAATTAGTTGA  150

seq1  AGACTGTTGAGATAGCTCAGTGAGTAAAGGTGCACTGATTGAAGTTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTTGAGATAGCTCAGTGAGTAAAGGTGCACTGATTGAAGTTGAAC  200

seq1  ACCTGAGTTCAAATTCTAGAACCCAACTGGCAGAAGAGAAGTAACTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGTTCAAATTCTAGAACCCAACTGGCAGAAGAGAAGTAACTTCTT  250

seq1  AAATTGTCATTTGACCTTCCAACGTAAACACACACACACACACACACCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTCATTTGACCTTCCAACGTAAACACACACACACACACACACCTT  300

seq1  GATACCTCTGTCCATACACAGGCACAGACACACAAGCACACAAACACATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCTCTGTCCATACACAGGCACAGACACACAAGCACACAAACACATG  350

seq1  AACACACACCTACAAATGTCTGTGAAAACTGGCATCATTAAGCATTAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACACCTACAAATGTCTGTGAAAACTGGCATCATTAAGCATTAAGA  400

seq1  AGCTCCTAATGGAAAAAAAAAAAGAAACAATTGACAAACAAACTAAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTAATGGAAAAAAAAAAAGAAACAATTGACAAACAAACTAAATAA  450

seq1  CATTATATTAGGTTGTACTATATAATGGTATAATATCCTATAAACCCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATATTAGGTTGTACTATATAATGGTATAATATCCTATAAACCCATA  500

seq1  TTGGTGTGAATGGTTGCATGGTAGGTAATTGAGCATGACTTAACCTGGCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTGAATGGTTGCATGGTAGGTAATTGAGCATGACTTAACCTGGCG  550

seq1  TGACCTGGTGGGACCCAGAGGTCTCTCCATTCCGCAAGACCTCTAGCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGGTGGGACCCAGAGGTCTCTCCATTCCGCAAGACCTCTAGCACA  600

seq1  CCCAGGACATCACAATCATGGGTGAGTGGAACAGAACATCAGCACCAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGACATCACAATCATGGGTGAGTGGAACAGAACATCAGCACCAAAG  650

seq1  AATCCCAGAGGGTCTTGTGCCAGCTGCACGAGGGACAAAGGAACCCTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGAGGGTCTTGTGCCAGCTGCACGAGGGACAAAGGAACCCTGAA  700

seq1  TGACCAGAAACTGGGATTCATTCTGGTTGGGGCCAGCCCCCTATATTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGAAACTGGGATTCATTCTGGTTGGGGCCAGCCCCCTATATTCTT  750

seq1  CCTGAACCCAGCAGAGGGAGCCAAGGACCCAGAGGACTCTCCACACCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACCCAGCAGAGGGAGCCAAGGACCCAGAGGACTCTCCACACCACA  800

seq1  GGACCCCTAGCACATAGAAAACCTAGGCATCATGGGACTCAGGAAGTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCCTAGCACATAGAAAACCTAGGCATCATGGGACTCAGGAAGTGAA  850

seq1  TCGGAGCTACAGACTTCTGGAAACCTGCCCTGCAAGAGGAGAGCTTGCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAGCTACAGACTTCTGGAAACCTGCCCTGCAAGAGGAGAGCTTGCCT  900

seq1  GCAGAGAGTGCTCTGGCCACTGTGACTC-AGGTGAGAGTT-GGACTCCCA  948
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  GCAGAGAGTGCTCTGGCCACTGTGACTCAAGGTGAGAGTTGGGACTCCCA  950

seq1  GGACTGCCGACAGAGGCTATCAGAATCAAAGAAGGAGCAAGCTTCAGCCA  998
      |||||||||| | |||||||||||||||||||||||||||||||||||||
seq2  GGACTGCCGAAAAAGGCTATCAGAATCAAAGAAGGAGCAAGCTTCAGCCA  1000

seq1  G-AGACAGCTAGATCTTCTAACACCAGAGATTACGAGATGGCAAAA  1043
      | ||||||||| ||| |||||||||||||||||||||||||| |||
seq2  GAAGACAGCTAAATC-TCTAACACCAGAGATTACGAGATGGCCAAA  1045