BAC Information

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BAC

Clone NameB6Ng01-325O07
Chromosome7 (Build37)
Map Location 7,382,517 - 7,383,709
singlet/doubletsinglet
Overlap geneVmn2r-ps36
Upstream geneLOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31
Downstream geneV2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325O07.bB6Ng01-325O07.g
ACCGA113836GA113837
length1,194695
definitionB6Ng01-325O07.b B6Ng01-325O07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttttccaatcacattcataacaatctatagatttgcttttgtt
aacgtaaaatgtttggaaacctatctattttggaatgtatttcttatttc
tttaagtctgggcatctgaaagactctaaacaactatgcaattgaagaca
ccaaacttctttaaatagaagaaacttttaccttcaagcagtgagaactg
actctttttccattgtctattgcctgattatcagcatgttgcagattcat
ctcatggagggcatgggctatggcatgcacagcattgtatatgttatgac
tattctcactaaaggtcatgtcaaacttctgttccattagccaattaaat
gaggcatcagatgaattgttcttcagtattttacaattggatgctgagct
tacatagttaaaatatttccactcttgcattagtagatataaatctgtgt
ttctgagatggaaccatgtctgtacaaaatttttaaagccagaaatctca
ccatggtggggtagaaaagtaagtgatccatagaatgtgccatgatttat
gtctttttttctggtagggaaattcaattgttttgtggtgatccatattc
tctgtaaaatgggaggttcccacattctgaagatcaaatcaatgaaattg
tatgtttctccataaatgataataacatttgtggatgacatcacaatttg
gttgtagtacatttcagtattttgtggaaatgaaacatcatcaacagaga
tcattttcacaaaggcaaagcaaatttccttgttttcactctgtttcttc
aactctaaaagaaattggtttccttgatcatcatctgggatgacaaggcc
aatccaattccagttgaagtaatgtatgaaggagaccattgccaatgcta
gagatgtgtcctttggggccatctgatagagatagggatattgttcatca
tcactgaagatggaactgaaaggtccataggtaagctgaaggatctacaa
cacagagagcagcatgaggtgtggtgcatgtgaaacacttgtaattatta
tttacctgcaacagtgattacctatgactttttttctctttgattcaatg
agcaaacgtggaagcttgggacatccactttctattgggaacagcaagca
ttgctgttgacaaagttgtaacaatggtattccgtaatgttata
gaattctacgcaaatttattcttttttatttattttttattttttaatta
gatatttactttatttgcatttcaaatgctatcccaaaaggctacccttc
ccccgccctgctccccaacccacccactcctgcttcctgaccctggcatt
ttcctctactagggaatataatcttcataagaccaagagcctctcctccc
agtgatggccgagtaggccaacttctgctaaatatgcagctaaagacttg
aggtctgtgggtactggttagttcatatagttgttcctactattgggttg
cagacccctttagttccttgggtacattctctagttcctccattgggggc
cctatgttccatccaatagatgacactgagcatccacttctggatttgcc
aggtactggtagagcctcacaggacacaggtatatcagggtcctgtcaga
aactgttgctagcataggcaatagtgtcttataaaaatttataaaaattc
actgtcttatatgatatacataaatagttaatatacaacttatatcaata
tatacttctataattacaatatatgatatacacaattataatatacaaat
actattaaaaatatataaatgtacacagcccatatatacaatatatatac
caaactcttatataatatatatattcacatctaatctaaaatcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7382517_7383709
seq2: B6Ng01-325O07.b_50_1243

seq1  GAATTCTTTTTCCAATCACATTCATAACAATCTATAGATTTGCTTTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTCCAATCACATTCATAACAATCTATAGATTTGCTTTTGTT  50

seq1  AACGTAAAATGTTTGGAAACCTATCTATTTTGGAATGTATTTCTTATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTAAAATGTTTGGAAACCTATCTATTTTGGAATGTATTTCTTATTTC  100

seq1  TTTAAGTCTGGGCATCTGAAAGACTCTAAACAACTATGCAATTGAAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTCTGGGCATCTGAAAGACTCTAAACAACTATGCAATTGAAGACA  150

seq1  CCAAACTTCTTTAAATAGAAGAAACTTTTACCTTCAAGCAGTGAGAACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTTCTTTAAATAGAAGAAACTTTTACCTTCAAGCAGTGAGAACTG  200

seq1  ACTCTTTTTCCATTGTCTATTGCCTGATTATCAGCATGTTGCAGATTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTTTCCATTGTCTATTGCCTGATTATCAGCATGTTGCAGATTCAT  250

seq1  CTCATGGAGGGCATGGGCTATGGCATGCACAGCATTGTATATGTTATGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGGAGGGCATGGGCTATGGCATGCACAGCATTGTATATGTTATGAC  300

seq1  TATTCTCACTAAAGGTCATGTCAAACTTCTGTTCCATTAGCCAATTAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCACTAAAGGTCATGTCAAACTTCTGTTCCATTAGCCAATTAAAT  350

seq1  GAGGCATCAGATGAATTGTTCTTCAGTATTTTACAATTGGATGCTGAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATCAGATGAATTGTTCTTCAGTATTTTACAATTGGATGCTGAGCT  400

seq1  TACATAGTTAAAATATTTCCACTCTTGCATTAGTAGATATAAATCTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGTTAAAATATTTCCACTCTTGCATTAGTAGATATAAATCTGTGT  450

seq1  TTCTGAGATGGAACCATGTCTGTACAAAATTTTTAAAGCCAGAAATCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGATGGAACCATGTCTGTACAAAATTTTTAAAGCCAGAAATCTCA  500

seq1  CCATGGTGGGGTAGAAAAGTAAGTGATCCATAGAATGTGCCATGATTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGTGGGGTAGAAAAGTAAGTGATCCATAGAATGTGCCATGATTTAT  550

seq1  GTCTTTTTTTCTGGTAGGGAAATTCAATTGTTTTGTGGTGATCCATATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTTTTCTGGTAGGGAAATTCAATTGTTTTGTGGTGATCCATATTC  600

seq1  TCTGTAAAATGGGAGGTTCCCACATTCTGAAGATCAAATCAATGAAATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAAATGGGAGGTTCCCACATTCTGAAGATCAAATCAATGAAATTG  650

seq1  TATGTTTCTCCATAAATGATAATAACATTTGTGGATGACATCACAATTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTCTCCATAAATGATAATAACATTTGTGGATGACATCACAATTTG  700

seq1  GTTGTAGTACATTTCAGTATTTTGTGGAAATGAAACATCATCAACAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAGTACATTTCAGTATTTTGTGGAAATGAAACATCATCAACAGAGA  750

seq1  TCATTTTCACAAAGGCAAAGCAAATTTCCTTGTTTTCACTCTGTTTCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCACAAAGGCAAAGCAAATTTCCTTGTTTTCACTCTGTTTCTTC  800

seq1  AACTCTAAAAGAAATTGGTTTCCTTGATCATCATCTGGGATGACAAGGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAAAAGAAATTGGTTTCCTTGATCATCATCTGGGATGACAAGGCC  850

seq1  AATCCAATTCCAGTTGAAGTAATGTATGAAGGAGACCATTGCCAATGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAATTCCAGTTGAAGTAATGTATGAAGGAGACCATTGCCAATGCTA  900

seq1  GAGATGTGTCCTTTGGGGCCATCTGATAGAGATAGGGATATTGTTCATCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTGTCCTTTGGGGCCATCTGATAGAGATAGGGATATTGTTCATCA  950

seq1  TCACTGAAGATGGAACTGAAAGGTCCATAGGTAAGCTGAAGGATCTACAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGAAGATGGAACTGAAAGGTCCATAGGTAAGCTGAAGGATCTACAA  1000

seq1  CACAGAGAGCAGCATGAGGTGTGGTGCATGTGAAAACACTTGTAATTA-T  1049
      |||||||||||||||||||||||||||||||| ||||||||||||||| |
seq2  CACAGAGAGCAGCATGAGGTGTGGTGCATGTG-AAACACTTGTAATTATT  1049

seq1  ATTTACCTGCAAACAGTTGATTACCTATGAC--TTTTTCTCTCTGATTCA  1097
      |||||||||| ||||| ||||||||||||||  ||||||||| |||||| 
seq2  ATTTACCTGC-AACAG-TGATTACCTATGACTTTTTTTCTCTTTGATTC-  1096

seq1  AATGAGCAAACGTGGAAGCCTGGCACATCCAC-TTCTAATGGGAACAGCA  1146
      ||||||||||||||||||| ||| |||||||| ||||| |||||||||||
seq2  AATGAGCAAACGTGGAAGCTTGGGACATCCACTTTCTATTGGGAACAGCA  1146

seq1  AGCATAGCTGTTTGACAAAGTTGTAACAAATGTATTC--TGATGTTATA  1193
      ||||| |||| ||||||||||||||||||  ||||||  | ||||||||
seq2  AGCATTGCTG-TTGACAAAGTTGTAACAATGGTATTCCGTAATGTTATA  1194