BAC Information

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BAC

Clone NameB6Ng01-326A18
Chromosome7 (Build37)
Map Location 13,236,046 - 13,237,157
singlet/doubletsinglet
Overlap geneVmn2r55
Upstream geneLOC628853, V1rg1, V1rg2, EG628898, V1rg5, V1rg6, LOC665999, V1rg4, LOC100042423, LOC628946, LOC100043075, LOC100042433, V1rg7, LOC100042437, V1rg3, LOC100042446, LOC100043092, V1rg9, V1rg12, V1rg8, V1rg11, Zfp551, EG666065, Zfp606, 2900092C05Rik, EG637908, EG666085
Downstream geneLOC629079, LOC629081, EG232875, LOC100043128, LOC100042515, Zfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326A18.bB6Ng01-326A18.g
ACCGA113951GA113952
length1,2231,113
definitionB6Ng01-326A18.b B6Ng01-326A18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgccgcctgagaagctctgtggctcttgtccggaaggaggc
cggccgtctggagctgaggatggtgctgcctcagaagctctgtggctctt
gccgggaaggtggctggttgtctggagctgaagatggcgccgcccagaag
ctctgcgactctcgcccgtcccagaaacggctggcactctgtattccaca
cggtcacccgtgcagcctgccctccgcggagtcccggagccaagacggct
cccgccggcgcctgtgccacaaacctctcaggcctggcagacccccgtgc
tctcaccaggaaggtggccggctgtctggagctgaagatggcgccgccca
gaagctctgcgactctcgcccgtcccagaaacggctggcactctgtattc
cacacggtcacccgtgcagcctgccctccgcggagtcccggagccaagaa
gactcccgccggcgcctgtgccacaaacctctcaagccaggcagaccccc
gtgctctcaccaggaaggtgccgctgtctggagctgagatggcgccgccc
agaagctctgcgactctcgcccgtccagaaacgctgcactctgtattcca
cacggtcacccgtgcagcttgccctcgcggagttcccggagccaagagct
cccaccggcgcctgttgcccacaacctctcaggcaggcagacccccatgt
ccttcacagaaggtgccggctgtcttggactgaaattggcgcgctcagta
ggctctctgcggcaaatcctacg
gaattcaatgccactggtcaggcagggttcctatgttcctggatcccact
ggtaccagttactgctggcagagttttgacagatgttgtgtcctcctcac
ttctgatcctatgatcttgggtgtgttagagcacctgggagtggagtttc
ctctgggtgttgtgggactggctgcagagtttgtgtccaagatctgccta
tttatttcttatttataaaaaaatgccctaatcattgagtaagccatacc
attcatcaactggtaaacatctagattctctcaattttttgtatataaat
aatgcttctcttaagattcacaggctttacacatatagtttatttttctt
gggtatatatctaaagtgtgagaatgataaatcatatagtaagtctatga
aggaactgtaaatgagaggttgaactcccagtactgctctgtgcaaaaca
aaaaaagacagatcaacaatctgcctatcagttgtgcacatgctcagaaa
gccttgacgacatcatcatcatcatcatcatcatcatcatcatcatcttc
atcacttcatgacaatttccccacctttgcactgatacgttgtgtatatg
gatatgactgatgttctgtggttgtcaggcagagttcaaagcacaaatta
gtgatgtcacttcactagatccatcatgtggatcctgggtaacacactca
aatcgccgtgcttactggcaaaaatttttgcccattgtgctatcttctta
gctcccctttccaagtttcttaactgtgatgactttcggcaatacatacg
gacaggacagtcagtgaccatctatatgtccactctaaacataacagtca
cttttgttttgtcctaagtatcttacttgaatctttatctgccctttaaa
tacatgttttgatacacaaagaaacaatgagtcaaaatcaagcacttact
cctggtgaaacccctgaggactaacaccttctgtggagcatctaactctg
tctatcctgctattatatgatggccttgcttagccaggaagggagtgttc
tttctcagtttcagtaagatgatgtagcacttcggaataagatggccacc
agaaggtccagcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_13236046_13237157
seq2: B6Ng01-326A18.g_68_1180

seq1  GAATTCAATGCCACTGGTCAGGCAGGGTTCCTATGTTCCTGGATCCCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCCACTGGTCAGGCAGGGTTCCTATGTTCCTGGATCCCACT  50

seq1  GGTACCAGTTACTGCTGGCAGAGTTTTGACAGATGTTGTGTCCTCCTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCAGTTACTGCTGGCAGAGTTTTGACAGATGTTGTGTCCTCCTCAC  100

seq1  TTCTGATCCTATGATCTTGGGTGTGTTAGAGCACCTGGGAGTGGAGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATCCTATGATCTTGGGTGTGTTAGAGCACCTGGGAGTGGAGTTTC  150

seq1  CTCTGGGTGTTGTGGGACTGGCTGCAGAGTTTGTGTCCAAGATCTGCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGTGTTGTGGGACTGGCTGCAGAGTTTGTGTCCAAGATCTGCCTA  200

seq1  TTTATTTCTTATTTATAAAAAAATGCCCTAATCATTGAGTAAGCCATACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCTTATTTATAAAAAAATGCCCTAATCATTGAGTAAGCCATACC  250

seq1  ATTCATCAACTGGTAAACATCTAGATTCTCTCAATTTTTTGTATATAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCAACTGGTAAACATCTAGATTCTCTCAATTTTTTGTATATAAAT  300

seq1  AATGCTTCTCTTAAGATTCACAGGCTTTACACATATAGTTTATTTTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTCTCTTAAGATTCACAGGCTTTACACATATAGTTTATTTTTCTT  350

seq1  GGGTATATATCTAAAGTGTGAGAATGATAAATCATATAGTAAGTCTATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATATATCTAAAGTGTGAGAATGATAAATCATATAGTAAGTCTATGA  400

seq1  AGGAACTGTAAATGAGAGGTTGAACTCCCAGTACTGCTCTGTGCAAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTGTAAATGAGAGGTTGAACTCCCAGTACTGCTCTGTGCAAAACA  450

seq1  AAAAAAGACAGATCAACAATCTGCCTATCAGTTGTGCACATGCTCAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGACAGATCAACAATCTGCCTATCAGTTGTGCACATGCTCAGAAA  500

seq1  GCCTTGACGACATCATCATCATCATCATCATCATCATCATCATCATCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGACGACATCATCATCATCATCATCATCATCATCATCATCATCTTC  550

seq1  ATCACTTCATGACAATTTCCCCACCTTTGCACTGATACGTTGTGTATATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTCATGACAATTTCCCCACCTTTGCACTGATACGTTGTGTATATG  600

seq1  GATATGACTGATGTTCTGTGGTTGTCAGGCAGAGTTCAAAGCACAAATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGACTGATGTTCTGTGGTTGTCAGGCAGAGTTCAAAGCACAAATTA  650

seq1  GTGATGTCACTTCACTAGATCCATCATGTGGATCCTGGGTAACACACTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTCACTTCACTAGATCCATCATGTGGATCCTGGGTAACACACTCA  700

seq1  AATCGCCGTGCTTACTGGCAAAAATTTTTGCCCATTGTGCTATCTTCTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGCCGTGCTTACTGGCAAAAATTTTTGCCCATTGTGCTATCTTCTTA  750

seq1  GCTCCCCTTTCCAAGTTTCTTAACTGTGATGACTTTCGGCAATACATACG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCTTTCCAAGTTTCTTAACTGTGATGACTTTCGGCAATACATACG  800

seq1  GACAGGACAGTCAGTGACCATCTATATGTCCACTCTAAACATAACAGTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGACAGTCAGTGACCATCTATATGTCCACTCTAAACATAACAGTCA  850

seq1  CTTTTGTTTTGTCCTAAGTATCTTACTTGAATCTTTATCTGCCCTTTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTTTTGTCCTAAGTATCTTACTTGAATCTTTATCTGCCCTTTAAA  900

seq1  TACATGTTTTGATACACAAAGAAACAATGAGTCAAAATCAAGCACTTACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTTTTGATACACAAAGAAACAATGAGTCAAAATCAAGCACTTACT  950

seq1  CCTGGTGAAACCCCTGAGGACTAACACCTTCTGTGGAGCATCTAACTCTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGAAACCCCTGAGGACTAACACCTTCTGTGGAGCATCTAACTCTG  1000

seq1  TCTATCCTGCTA-TATATGATGGCCTTGCTTTAGCCAGGAA-GGAGTGTT  1048
      |||||||||||| |||||||||||||||| ||||||||||| ||||||||
seq2  TCTATCCTGCTATTATATGATGGCCTTGC-TTAGCCAGGAAGGGAGTGTT  1049

seq1  C-TTCTCAGGTTTCAGTAAGATGATGTAGCACTTCGGAATAAAGAT-GCC  1096
      | |||||| ||||||||||||||||||||||||||||||| ||||| |||
seq2  CTTTCTCA-GTTTCAGTAAGATGATGTAGCACTTCGGAAT-AAGATGGCC  1097

seq1  ACCAAGAAGTCCAGCG  1112
      ||||  | ||||||||
seq2  ACCAGAAGGTCCAGCG  1113