BAC Information

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BAC

Clone NameB6Ng01-326F18
Chromosome7 (Build37)
Map Location 148,009,157 - 148,010,283
singlet/doubletsinglet
Overlap genenone
Upstream geneGpr123, LOC244229, Kndc1, Utf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox, Mtg1, Sprn, Olfr522, Olfr523, Olfr524, E430002D04Rik, 5830411N06Rik, EG622335, Olfr525, Olfr527, GA_x5J8B7W72BC-152913-152037, Olfr60, GA_x5J8B7W72BC-125691-125311, Olfr530, LOC622973, Olfr531, Olfr532, Olfr533, Olfr534-ps1, Olfr535, Olfr536, Olfr537-ps1, Olfr1523-ps1, Olfr538, Olfr1553-ps1, Olfr46, Olfr61, Olfr53, Olfr539, GA_x5J8B7W3EKE-4574231-4574913, Olfr45, Olfr541, GA_x5J8B7W3EKE-4522784-4521912, Cyp2e1, Syce1, LOC100043529, BC066028
Downstream gene1190003J15Rik, Scgb1c1, Odf3, Bet1l, Ric8, Sirt3, Psmd13, LOC100043546, Cox8b, Nlrp6, Athl1, Ifitm5, Ifitm2, Ifitm1, LOC665143, Ifitm3, Ifitm6, B4galnt4, Pkp3, Sigirr, Trp53i5, Ptdss2, Rnh1, LOC546015, Hras1, Lrrc56, 1600016N20Rik, Rassf7, AA673488, Irf7, Mucdhl, Sct, Drd4, Deaf1, Tmem80, Eps8l2, B230206H07Rik, Taldo1, LOC100043585, Pddc1, Cend1, Slc25a22, Lrdd, Rplp2, Pnpla2, Efcab4a, Cd151, Polr2l, Tspan4, Chid1, Ap2a2, Muc6, LOC100039649, Muc2, Muc5ac
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326F18.bB6Ng01-326F18.g
ACCGA114187GA114188
length1,0191,134
definitionB6Ng01-326F18.b B6Ng01-326F18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccctacaaagggacagcgagagaccattgtgtgaagctataaaag
tgaggcctgggttgcaggggagatctcaagatgttggcgatctaaagttg
agagacatctgccaaggagagctgcatacagcgagtctaaccagcccaac
ggagagacacatgctgcaggcaacaaaaccggaggggcaaaacaatgttt
tttgttttttgggtttttttttttttttggtttttcgagacagggtttct
ctgtgtagccctggctgtcctggagctcactttgtagaccaggctggcct
caaaactcagaaatctgcctgcctttgcctcctgagtgctgggattaaag
gcgtgcgccaccacgccgggcctcaaaacaatttaagttccttaaaactt
tagtcccagagactgaattttgagctacaggattggatgttttccctgct
gagtgatggttttgttttggcctaatattttgtcactaggccagattctt
tcctcttgcaatagtaaggtgtcttctgtgccattctatgtcagaagttt
gtaatttgctttttgcttttgcaggggattaattaagagattgccttgag
tctcagaagagactttggacttttagacagtggtgagactatgaaggact
atggagccttttgaagttggactaaatgcatttcacacaataatgtgttt
aagggggccagggagtggaacatcgtggtttgaatgaagagtgtcgtggt
gttgcctgaggtaggcttaggaggggcatccttgatgaaacagtatggag
gaaggatttgggagattgcgttctttctctactctcagtttcttctctct
gcttcatgtttgcctttgacgatgtgagcttctcggcttcctgttcctgc
ggccaagccttgcaactgccaccctgctttcccatttaaggattcttacc
cttctggagccacgaggtgcttttatgacagatgtcccatgtgggcttgc
atatttgtattagttactg
gaattccagtgggacttgggagctggaacaggacattgtaaacgctaagc
gatgtgtaaagggggtagatacaaattcaaagcagaactgccaggctttg
atttactctgcatttactccatgtggacccaagtgaaaaatcagtaatac
tattttgataaaaagtgatttgggagtactgttttatcgggaagcaactt
aagctttgacgtgagaggcaatccctcaatgcaggaatgcccaccacata
tacaatgtgaggcccagtgtaaagtttaaagtttctcctattcacatttt
ttaaattagaagaaacaagcaaatggccaacagtcaatttaaaggattct
caaataaataacctttagagacagtcaaggttaaaccactatggcatata
acttcatagctattacattagcaactatctgaaaaataagtaatagcaaa
ttatctcacacatatggagaaagctgaaatctccattctgtttttaaaac
aattggttctaaaagaaaaaaaagttctaatccattactgattagtttat
ggtgtgtttgtgttagttatttttctattcccatgacagaacaccatgac
caaggcaacttataaaataaaccattgtatttagggctcacagtcccaaa
gggttagagtctatgaccatcatggtggggagcatggcagcaggcaggca
ggcatggtgccggggcagtagctgagagtttacatctccaaccatgaggc
agagagagctaactaggattggcagaaacctcacacccaaatagttacag
caactggggaccaaagtattcaaatatacgagcctatggggggtcattct
cctgcagactgctgtagatggggatacagagcaaagaaaacaccactgag
gttgtgtttccaatccagtgaaaaccttctttgcatttttgtttgaaaca
tgctctccaagtatattttactgatacatgcaaagcatgcatatatgcgt
atgcatactcacttattatgagataacaagttatgtttgaacaaatttct
acactggtgcgctttatacacacctcgtcaaatattgtggtgagcctttc
caggctcttcaagcttcgattccaatactgaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_148009157_148010283
seq2: B6Ng01-326F18.g_67_1200

seq1  GAATTCCAGTGGGACTTGGGAGCTGGAACAGGACATTGTAAACGCTAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGGGACTTGGGAGCTGGAACAGGACATTGTAAACGCTAAGC  50

seq1  GATGTGTAAAGGGGGTAGATACAAATTCAAAGCAGAACTGCCAGGCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGTAAAGGGGGTAGATACAAATTCAAAGCAGAACTGCCAGGCTTTG  100

seq1  ATTTACTCTGCATTTACTCCATGTGGACCCAAGTGAAAAATCAGTAATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTCTGCATTTACTCCATGTGGACCCAAGTGAAAAATCAGTAATAC  150

seq1  TATTTTGATAAAAAGTGATTTGGGAGTACTGTTTTATCGGGAAGCAACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGATAAAAAGTGATTTGGGAGTACTGTTTTATCGGGAAGCAACTT  200

seq1  AAGCTTTGACGTGAGAGGCAATCCCTCAATGCAGGAATGCCCACCACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTGACGTGAGAGGCAATCCCTCAATGCAGGAATGCCCACCACATA  250

seq1  TACAATGTGAGGCCCAGTGTAAAGTTTAAAGTTTCTCCTATTCACATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGTGAGGCCCAGTGTAAAGTTTAAAGTTTCTCCTATTCACATTTT  300

seq1  TTAAATTAGAAGAAACAAGCAAATGGCCAACAGTCAATTTAAAGGATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTAGAAGAAACAAGCAAATGGCCAACAGTCAATTTAAAGGATTCT  350

seq1  CAAATAAATAACCTTTAGAGACAGTCAAGGTTAAACCACTATGGCATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAATAACCTTTAGAGACAGTCAAGGTTAAACCACTATGGCATATA  400

seq1  ACTTCATAGCTATTACATTAGCAACTATCTGAAAAATAAGTAATAGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATAGCTATTACATTAGCAACTATCTGAAAAATAAGTAATAGCAAA  450

seq1  TTATCTCACACATATGGAGAAAGCTGAAATCTCCATTCTGTTTTTAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCACACATATGGAGAAAGCTGAAATCTCCATTCTGTTTTTAAAAC  500

seq1  AATTGGTTCTAAAAGAAAAAAAAGTTCTAATCCATTACTGATTAGTTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGTTCTAAAAGAAAAAAAAGTTCTAATCCATTACTGATTAGTTTAT  550

seq1  GGTGTGTTTGTGTTAGTTATTTTTCTATTCCCATGACAGAACACCATGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTTTGTGTTAGTTATTTTTCTATTCCCATGACAGAACACCATGAC  600

seq1  CAAGGCAACTTATAAAATAAACCATTGTATTTAGGGCTCACAGTCCCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAACTTATAAAATAAACCATTGTATTTAGGGCTCACAGTCCCAAA  650

seq1  GGGTTAGAGTCTATGACCATCATGGTGGGGAGCATGGCAGCAGGCAGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAGAGTCTATGACCATCATGGTGGGGAGCATGGCAGCAGGCAGGCA  700

seq1  GGCATGGTGCCGGGGCAGTAGCTGAGAGTTTACATCTCCAACCATGAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGTGCCGGGGCAGTAGCTGAGAGTTTACATCTCCAACCATGAGGC  750

seq1  AGAGAGAGCTAACTAGGATTGGCAGAAACCTCACACCCAAATAGTTACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGCTAACTAGGATTGGCAGAAACCTCACACCCAAATAGTTACAG  800

seq1  CAACTGGGGACC-AAGTATTCAAATATACGAGCCTAT-GGGGGTCATTCT  848
      |||||||||||| |||||||||||||||||||||||| ||||||||||||
seq2  CAACTGGGGACCAAAGTATTCAAATATACGAGCCTATGGGGGGTCATTCT  850

seq1  CCTGCAGACTGCTGTAGATGGGGATACAGAGCAAAGAAAACACCACTGAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGACTGCTGTAGATGGGGATACAGAGCAAAGAAAACACCACTGAG  900

seq1  GTTGTGTTTCCAATCCAGTGAAAACCTTCTTTGCATTTTTGTTTGAAACA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTTTCCAATCCAGTGAAAACCTTCTTTGCATTTTTGTTTGAAACA  950

seq1  TGCTCTCCAAGTATATTTTAACTGATACATGCAAAGCATGCATAATATGC  998
      ||||||||||||||||||| ||||||||||||||||||||||| ||||||
seq2  TGCTCTCCAAGTATATTTT-ACTGATACATGCAAAGCATGCAT-ATATGC  998

seq1  GTATGCATACTCACTAATAATGAGATAACAAGTAATGTTTTGACAAATTT  1048
      ||||||||||||||| || |||||||||||||| ||||||  ||||||||
seq2  GTATGCATACTCACTTATTATGAGATAACAAGTTATGTTTGAACAAATTT  1048

seq1  CTACACT-GTGCGCTGTATAACCACACCTCTTTAAATATTTGTGGTGAAA  1097
      ||||||| ||||||| ||||  |||||||| | ||||| |||||||| | 
seq2  CTACACTGGTGCGCTTTATA--CACACCTCGTCAAATA-TTGTGGTG-AG  1094

seq1  GCTTTCAAAGCTCTTCAAGCT----------TTCTGAATT  1127
       ||||| | ||||||||||||          | |||||||
seq2  CCTTTCCAGGCTCTTCAAGCTTCGATTCCAATACTGAATT  1134