BAC Information

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BAC

Clone NameB6Ng01-327B19
Chromosome7 (Build37)
Map Location 107,927,217 - 108,073,916
singlet/doubletdoublet
Overlap geneB930006L02Rik, Tnfrsf19l, Arhgef17
Upstream geneNeu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, LOC100041204
Downstream geneP2ry6, P2ry2, LOC100049539, EG435996, Fchsd2, EG622673, Atg16l2, Stard10, Centd2, Pde2a, Art2a, EG630138, Art2b, Clpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327B19.bB6Ng01-327B19.g
ACCGA114743GA114744
length1,110471
definitionB6Ng01-327B19.b B6Ng01-327B19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,927,217 - 107,928,336)(108,073,439 - 108,073,916)
sequence
gaattctcttaaacaagagaattagcacatagtaaatcgaagtgtagccg
gatctgcctccctcccaagtgctagagttataggtgtgtgacatcacaca
tggcttcaattccattttagacattaaccattctcttactaaattgaaga
aaatatggttccagtagatttttccttaattctatcagtatgatttacaa
agaagcccagattttatagtggctacctgtttctattgttttatcaaatg
aaatcagactacatattagatttctgtctttaaaaattctgtacactgta
tttcattagaaaacactttaatttaaagatgaaatagagaattgtgactt
ctacaaatctgacaaagggatctcaatatgggagcggctttcacagttaa
cagaaagatcttttcatgctaaagttcaacaactgacttgtgcctgacta
taaaggagatgctcatttgcaaaatgtcgaattccaactaccacagcact
tattagcccattagaataactaagaaaaatggctttttagctcatcaaaa
caggacaagggactggaaagatggaaacatgcaagcatgaggacccaagt
ctgatcctacaaagctgggcatggctacacaggctctataaacccaacac
tacagtcatgggcaagtacagaagcaaaaggatcaccagggcttgctggc
caccaggctcattccaggttcagtgagaaaccctgtctcacacaaatgaa
ggggggagtgatagatgggtagacctgaaacccacacacatgcttgggca
tgtgtatctccctctccctcggcccatgggcggggaagacacaccacagg
caactaattgtttatctagcacatgcttttgcaaatgatacaaaatgtct
tctcaaggtcataggttttttaaaaagaattgaactagttttatagagag
cctctctaacacagaattaattattcattaaaacaaacagcctcggcagg
taaaagcactgctgccaaacctgagaagctgaattgatccaggaactcat
atggtataggagaaaccatttctgaagctgttctctgactcgcacataca
ttataccgta
tgagacccaaaaagggagaatgctgagcccaaggtcacaccacaaggcca
ggcagagctggacccaagccctagaacctctggccttgttcctctcccac
tcaacagcagccctggcacccacctcagcctgcccagatgcccctgcgtt
ctgcggggctgggcggcagcccttcccaccacttttgtctggctggctcc
cccttggcggggacttgtggagacaagttttcctcctgcccctccttggc
tctttactgtgattcctccccaccccccatggaaactgcttccgtgggga
ggggatgaggtgataaggacttttggaattctgagtagtaccaaatatct
ataattaaagtcttgtcacccagcaggagggtgggatgggggaggactgg
caaaagggtttcatttcagggtttattccctgccacccttctttcctagg
atcctgtggtattgtaggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_107927217_107928336
seq2: B6Ng01-327B19.b_47_1156

seq1  GAATTCTCTTAAACAAGAGAATTAGCACATAGTAAATCGAAGTGTAGCCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAAACAAGAGAATTAGCACATAGTAAATCGAAGTGTAGCCG  50

seq1  GATCTGCCTCCCTCCCAAGTGCTAGAGTTATAGGTGTGTGACATCACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCCTCCCTCCCAAGTGCTAGAGTTATAGGTGTGTGACATCACACA  100

seq1  TGGCTTCAATTCCATTTTAGACATTAACCATTCTCTTACTAAATTGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCAATTCCATTTTAGACATTAACCATTCTCTTACTAAATTGAAGA  150

seq1  AAATATGGTTCCAGTAGATTTTTCCTTAATTCTATCAGTATGATTTACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGGTTCCAGTAGATTTTTCCTTAATTCTATCAGTATGATTTACAA  200

seq1  AGAAGCCCAGATTTTATAGTGGCTACCTGTTTCTATTGTTTTATCAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCCAGATTTTATAGTGGCTACCTGTTTCTATTGTTTTATCAAATG  250

seq1  AAATCAGACTACATATTAGATTTCTGTCTTTAAAAATTCTGTACACTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGACTACATATTAGATTTCTGTCTTTAAAAATTCTGTACACTGTA  300

seq1  TTTCATTAGAAAACACTTTAATTTAAAGATGAAATAGAGAATTGTGACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTAGAAAACACTTTAATTTAAAGATGAAATAGAGAATTGTGACTT  350

seq1  CTACAAATCTGACAAAGGGATCTCAATATGGGAGCGGCTTTCACAGTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAATCTGACAAAGGGATCTCAATATGGGAGCGGCTTTCACAGTTAA  400

seq1  CAGAAAGATCTTTTCATGCTAAAGTTCAACAACTGACTTGTGCCTGACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGATCTTTTCATGCTAAAGTTCAACAACTGACTTGTGCCTGACTA  450

seq1  TAAAGGAGATGCTCATTTGCAAAATGTCGAATTCCAACTACCACAGCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAGATGCTCATTTGCAAAATGTCGAATTCCAACTACCACAGCACT  500

seq1  TATTAGCCCATTAGAATAACTAAGAAAAATGGCTTTTTAGCTCATCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGCCCATTAGAATAACTAAGAAAAATGGCTTTTTAGCTCATCAAAA  550

seq1  CAGGACAAGGGACTGGAAAGATGGAAACATGCAAGCATGAGGACCCAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAAGGGACTGGAAAGATGGAAACATGCAAGCATGAGGACCCAAGT  600

seq1  CTGATCCTACAAAGCTGGGCATGGCTACACAGGCTCTATAAACCCAACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCCTACAAAGCTGGGCATGGCTACACAGGCTCTATAAACCCAACAC  650

seq1  TACAGTCATGGGCAAGTACAGAAGCAAAAGGATCACCAGGGCTTGCTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTCATGGGCAAGTACAGAAGCAAAAGGATCACCAGGGCTTGCTGGC  700

seq1  CACCAGGCTCATTCCAGGTTCAGTGAGAAACCCTGTCTCACACAAATGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGCTCATTCCAGGTTCAGTGAGAAACCCTGTCTCACACAAATGAA  750

seq1  GGGGGGAGTGATAGATGGGTAGACCTGAAACCCACACACATGCTTGGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGAGTGATAGATGGGTAGACCTGAAACCCACACACATGCTTGGGCA  800

seq1  TGTGTATCTCCCTCTCCCTCGGCCCATGGGCGGGGAAGACACACCACAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATCTCCCTCTCCCTCGGCCCATGGGCGGGGAAGACACACCACAGG  850

seq1  CAACTAATTGTTTATCTAGCACATGCTTTTGCAAATGATACAAAATGTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAATTGTTTATCTAGCACATGCTTTTGCAAATGATACAAAATGTCT  900

seq1  TCTCAAGGTCATAGGTTTTTTAAAAAGAA-TGAACTAGTTTTATAGAGAG  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCTCAAGGTCATAGGTTTTTTAAAAAGAATTGAACTAGTTTTATAGAGAG  950

seq1  CCTCTCTAAACACAGAATTAATTATTCATTAAAACAAAACAGCCTCGGCA  999
      ||||||| ||||||||||||||||||||||||||| ||||||||||||||
seq2  CCTCTCT-AACACAGAATTAATTATTCATTAAAAC-AAACAGCCTCGGCA  998

seq1  GGTAAAAAGCACTGCTGCCAAACCTGAGAAGCTGAATTTGATCCCAGGAA  1049
      ||| |||||||||||||||||||||||||||||||| ||||| |||||||
seq2  GGT-AAAAGCACTGCTGCCAAACCTGAGAAGCTGAA-TTGAT-CCAGGAA  1045

seq1  CTCATATGGTATAAGGAGAAAACCAATTTCTGAAAGCTGTTCTCTGACCT  1099
      |||||||||||| ||||||||  | ||||||| |||||||||||||||  
seq2  CTCATATGGTAT-AGGAGAAA--CCATTTCTG-AAGCTGTTCTCTGAC--  1089

seq1  TCGCACATACATTATACCGTA  1120
      |||||||||||||||||||||
seq2  TCGCACATACATTATACCGTA  1110

seq1: chr7_108073439_108073916
seq2: B6Ng01-327B19.g_65_540 (reverse)

seq1  CTCCTCCAATACCACAGGGTCCTAGGAAAGAAGGGGGGCAGGGAATAAAC  50
      ||||| |||||||||||| |||||||||||||||| ||||||||||||||
seq2  CTCCTACAATACCACAGGATCCTAGGAAAGAAGGGTGGCAGGGAATAAAC  50

seq1  CCTGAAAAGGACAACCCTTTTGCCTGTCCTCCCCCATCCCACCCTCCTGC  100
      ||||||| |   |||||||||||| |||||||||||||||||||||||||
seq2  CCTGAAATG--AAACCCTTTTGCCAGTCCTCCCCCATCCCACCCTCCTGC  98

seq1  TGGGTGACAAGACTTTAATTATAGATATTTGGTACTACTCAGAATTCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGACAAGACTTTAATTATAGATATTTGGTACTACTCAGAATTCCAA  148

seq1  AAGTCCTTATCACCTCATCCCCTCCCCACGGAAGCAGTTTCCATGGGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTTATCACCTCATCCCCTCCCCACGGAAGCAGTTTCCATGGGGGG  198

seq1  TGGGGAGGAATCACAGTAAAGAGCCAAGGAGGGGCAGGAGGAAAACTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGGAATCACAGTAAAGAGCCAAGGAGGGGCAGGAGGAAAACTTGT  248

seq1  CTCCACAAGTCCCCGCCAAGGGGGAGCCAGCCAGACAAAAGTGGTGGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAAGTCCCCGCCAAGGGGGAGCCAGCCAGACAAAAGTGGTGGGAA  298

seq1  GGGCTGCCGCCCAGCCCCGCAGAACGCAGGGGCATCTGGGCAGGCTGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGCCGCCCAGCCCCGCAGAACGCAGGGGCATCTGGGCAGGCTGAGG  348

seq1  TGGGTGCCAGGGCTGCTGTTGAGTGGGAGAGGAACAAGGCCAGAGGTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGCCAGGGCTGCTGTTGAGTGGGAGAGGAACAAGGCCAGAGGTTCT  398

seq1  AGGGCTTGGGTCCAGCTCTGCCTGGCCTTGTGGTGTGACCTTGGGCTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTTGGGTCCAGCTCTGCCTGGCCTTGTGGTGTGACCTTGGGCTCAG  448

seq1  CATTCTCCCTTTTTGGGTCTCAGAATTC  478
      ||||||||||||||||||||||||||||
seq2  CATTCTCCCTTTTTGGGTCTCAGAATTC  476