BAC Information

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BAC

Clone NameB6Ng01-327I18
Chromosome7 (Build37)
Map Location 26,047,905 - 26,155,702
singlet/doubletdoublet
Overlap geneCic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn
Upstream geneZfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936, LOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf
Downstream geneLipe, BC024561, LOC434148, Ceacam1, Ceacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732, EG623475, Cyp2b10, LOC232993, EG667957, BC026762, Cyp2b13, EG668047, LOC623532, Cyp2b9, LOC667968, Cyp2a4, Nlrp9c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327I18.bB6Ng01-327I18.g
ACCGA115065GA115066
length866939
definitionB6Ng01-327I18.b B6Ng01-327I18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,154,838 - 26,155,702)(26,047,905 - 26,048,828)
sequence
gaattcattgggaatttggatctagctctcgaggaacacacagcctagac
tagggtcgccagagtctagaccctcttttagattaagaggcccaggctca
gcccttctccctcagactcataggtctcaaccccagccctcctccctcag
ttcatggatccagactcttccctcagacccaggttccagatcccagcctc
ctctctcagactccagtatcagctttcccccttcagacccaggagtctag
gtcccatacctcctccctcagattcacattccagacctccccatctctgc
tcccatcgcactcaggtgttaactggggccagacacaacccccaggtttc
ttgtcagtccccagccccctcccttcccatttgaagcagagatgaggtgc
aatatttactttggtcctcacatgaatcgccccctaaaacacgtgactgt
cccccactgaccccatgcctccgggccttgaaccgaacactggggaggaa
cccgctcccactctgtataacacaccaggcatccctccctaacccctcac
tctctccctgcctctccagatcttgcagttttctgtctctcaacatctgt
gtctacctgtctccatcctctcaattcccatctccagtcactcatcttcc
ctatctcccctgccctgggtccctgctccctcttccccagtctccttctt
cctgtacattctccatctctgactctgtttctatctcttcccactcttgt
ttctacctctgccgcaggtcttcagtcctgagagatgagacaagagggga
agtggggtgtggggaacagagaggagagggagggatggaaaattcagggg
gaagggaagagggtca
gaattctgcctgtatgtatgcctatgcatcatgtgtgtgcctggtgacca
tggagacaagaaggggttgtcagatctcctggaactggagttacatatgt
ttgtgagctgcctggtgagtgccaggcatccattgcagatgccctggaag
accagtcagcactttttaatgccatttttcccgcctccgctctgttttgt
tttgagggagggatgtttaaagggtgttgagaccagtctcattttttagc
cctggctggcctagaactcagagaaatccatgctggggaccagacatgta
cggaccacacatcacccaagtgaagtttagaagataactttcaggggatc
gaactctgggactcaggcttggtggcaagtacctgtacctggtaggccat
ttcccttgtcctcttttctattactggaaatttatttatatatttattta
tttatttatgaaacccagggccttatccatcttaagcatgagtttcctgt
tactaagctacattcccaactcattaaagaaataacttatgggctggtga
gatggctcagtgggtaagagcacccgactgctcttccgaaggtccagagt
tcaaatcccagcaaccacatggtggctcacaaccatccctcttctggagt
gtctgaagacagctacagtgtacttacacataatcaataaataaatcttt
aaaaaaaaaaaagaaataactttataactggtaataggtcagagtactag
gtaatatttctgatatatatatatatatatatatatattatatatagtac
ccaatctgattaaataaatgatggtttcttaaacattttagcttttttcc
ctctctcctttgctttttccagcttgagggtctgctggatgcagctccaa
gttcttgaatgacttccagcacccgcctccccagatgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_26154838_26155702
seq2: B6Ng01-327I18.b_46_911 (reverse)

seq1  TGACCCTCTTCCCTTCCCCCTGGATTTTCCAT-CCTCCCTCTCCTCTCTG  49
      |||||||||||||||||||||| ||||||||| |||||||||||||||||
seq2  TGACCCTCTTCCCTTCCCCCTGAATTTTCCATCCCTCCCTCTCCTCTCTG  50

seq1  TTCCCCACACCCCACTTCCCCTCTTGTCTCATCTCTCAGGACTGAAGACC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCACACCCCACTTCCCCTCTTGTCTCATCTCTCAGGACTGAAGACC  100

seq1  TGCGGCAGAGGTAGAAACAAGAGTGGGAAGAGATAGAAACAGAGTCAGAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGCAGAGGTAGAAACAAGAGTGGGAAGAGATAGAAACAGAGTCAGAG  150

seq1  ATGGAGAATGTACAGGAAGAAGGAGACTGGGGAAGAGGGAGCAGGGACCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGAATGTACAGGAAGAAGGAGACTGGGGAAGAGGGAGCAGGGACCC  200

seq1  AGGGCAGGGGAGATAGGGAAGATGAGTGACTGGAGATGGGAATTGAGAGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGGGGAGATAGGGAAGATGAGTGACTGGAGATGGGAATTGAGAGG  250

seq1  ATGGAGACAGGTAGACACAGATGTTGAGAGACAGAAAACTGCAAGATCTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGACAGGTAGACACAGATGTTGAGAGACAGAAAACTGCAAGATCTG  300

seq1  GAGAGGCAGGGAGAGAGTGAGGGGTTAGGGAGGGATGCCTGGTGTGTTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCAGGGAGAGAGTGAGGGGTTAGGGAGGGATGCCTGGTGTGTTAT  350

seq1  ACAGAGTGGGAGCGGGTTCCTCCCCAGTGTTCGGTTCAAGGCCCGGAGGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTGGGAGCGGGTTCCTCCCCAGTGTTCGGTTCAAGGCCCGGAGGC  400

seq1  ATGGGGTCAGTGGGGGACAGTCACGTGTTTTAGGGGGCGATTCATGTGAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGTCAGTGGGGGACAGTCACGTGTTTTAGGGGGCGATTCATGTGAG  450

seq1  GACCAAAGTAAATATTGCACCTCATCTCTGCTTCAAATGGGAAGGGAGGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAAGTAAATATTGCACCTCATCTCTGCTTCAAATGGGAAGGGAGGG  500

seq1  GGCTGGGGACTGACAAGAAACCTGGGGGTTGTGTCTGGCCCCAGTTAACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGGACTGACAAGAAACCTGGGGGTTGTGTCTGGCCCCAGTTAACA  550

seq1  CCTGAGTGCGATGGGAGCAGAGATGGGGAGGTCTGGAATGTGAATCTGAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTGCGATGGGAGCAGAGATGGGGAGGTCTGGAATGTGAATCTGAG  600

seq1  GGAGGAGGTATGGGACCTAGACTCCTGGGTCTGAAGGGGGAAAGCTGATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGTATGGGACCTAGACTCCTGGGTCTGAAGGGGGAAAGCTGATA  650

seq1  CTGGAGTCTGAGAGAGGAGGCTGGGATCTGGAACCTGGGTCTGAGGGAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTCTGAGAGAGGAGGCTGGGATCTGGAACCTGGGTCTGAGGGAAG  700

seq1  AGTCTGGATCCATGAACTGAGGGAGGAGGGCTGGGGTTGAGACCTATGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGATCCATGAACTGAGGGAGGAGGGCTGGGGTTGAGACCTATGAG  750

seq1  TCTGAGGGAGAAGGGCTGAGCCTGGGCCTCTTAATCTAAAAGAGGGTCTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGGAGAAGGGCTGAGCCTGGGCCTCTTAATCTAAAAGAGGGTCTA  800

seq1  GACTCTGGCGACCCTAGTCTAGGCTGTGTGTTCCTCGAGAGCTAGATCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTGGCGACCCTAGTCTAGGCTGTGTGTTCCTCGAGAGCTAGATCCA  850

seq1  AATTCCCAATGAATTC  865
      ||||||||||||||||
seq2  AATTCCCAATGAATTC  866

seq1: chr7_26047905_26048828
seq2: B6Ng01-327I18.g_67_1005

seq1  GAATTCTGCCTGTATGTATGCCTATGCATCATGTGTGTGCCTGGTGACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCTGTATGTATGCCTATGCATCATGTGTGTGCCTGGTGACCA  50

seq1  TGGAGACAAGAAGGGGTTGTCAGATCTCCTGGAACTGGAGTTACATATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACAAGAAGGGGTTGTCAGATCTCCTGGAACTGGAGTTACATATGT  100

seq1  TTGTGAGCTGCCTGGTGAGTGCCAGGCATCCATTGCAGATGCCCTGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGCTGCCTGGTGAGTGCCAGGCATCCATTGCAGATGCCCTGGAAG  150

seq1  ACCAGTCAGCACTTTTTAATGCCATTTTTCCCGCCTCCGCTCTGTTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTCAGCACTTTTTAATGCCATTTTTCCCGCCTCCGCTCTGTTTTGT  200

seq1  TTTGAGGGAGGGATGTTTAAAGGGTGTTGAGACCAGTCTCATTTTTTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGGAGGGATGTTTAAAGGGTGTTGAGACCAGTCTCATTTTTTAGC  250

seq1  CCTGGCTGGCCTAGAACTCAGAGAAATCCATGCTGGGGACCAGACATGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGGCCTAGAACTCAGAGAAATCCATGCTGGGGACCAGACATGTA  300

seq1  CGGACCACACATCACCCAAGTGAAGTTTAGAAGATAACTTTCAGGGGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACCACACATCACCCAAGTGAAGTTTAGAAGATAACTTTCAGGGGATC  350

seq1  GAACTCTGGGACTCAGGCTTGGTGGCAAGTACCTGTACCTGGTAGGCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCTGGGACTCAGGCTTGGTGGCAAGTACCTGTACCTGGTAGGCCAT  400

seq1  TTCCCTTGTCCTCTTTTCTATTACTGGAAATTTATTTATATATTTATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTGTCCTCTTTTCTATTACTGGAAATTTATTTATATATTTATTTA  450

seq1  TTTATTTATGAAACCCAGGGCCTTATCCATCTTAAGCATGAGTTTCCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATGAAACCCAGGGCCTTATCCATCTTAAGCATGAGTTTCCTGT  500

seq1  TACTAAGCTACATTCCCAACTCATTAAAGAAATAACTTATGGGCTGGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGCTACATTCCCAACTCATTAAAGAAATAACTTATGGGCTGGTGA  550

seq1  GATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGT  600

seq1  TCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCCTCTTCTGGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCCTCTTCTGGAGT  650

seq1  GTCTGAAGACAGCTACAGTGTACTTACACATAATCAATAAATAAATCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAGACAGCTACAGTGTACTTACACATAATCAATAAATAAATCTTT  700

seq1  AAAAAAAAAAAAGAAATAAC-TTATAACTGGTAATAGGTCAGAGTACTAG  749
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAGAAATAACTTTATAACTGGTAATAGGTCAGAGTACTAG  750

seq1  GTAATA-TTCTGATATATATATATATATATATATATA-TATATATAGTA-  796
      |||||| |||||||||||||||||||||||||||||| ||||||||||| 
seq2  GTAATATTTCTGATATATATATATATATATATATATATTATATATAGTAC  800

seq1  CCAATCTGATTAAATAAATGAT-GTTTCTTAAACA-TTTAGCTTTTTT-C  843
      |||||||||||||||||||||| |||||||||||| |||||||||||| |
seq2  CCAATCTGATTAAATAAATGATGGTTTCTTAAACATTTTAGCTTTTTTCC  850

seq1  CTCTCTCCTTTGC-TTTTCCAGC-TGA-GGTCTGCT-GATGCAGC-CCAG  888
      ||||||||||||| ||||||||| ||| |||||||| |||||||| ||| 
seq2  CTCTCTCCTTTGCTTTTTCCAGCTTGAGGGTCTGCTGGATGCAGCTCCAA  900

seq1  GT--CTGGATGACCTCCAGCACCGGCCT-CCCAGATGCT  924
      ||   || ||||| ||||||||| |||| ||||||||||
seq2  GTTCTTGAATGACTTCCAGCACCCGCCTCCCCAGATGCT  939